22 Publikationen

Alle markieren

[22]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782605
Rupp, Oliver, Brinkrolf, Karina, Buerth, Christoph, Kunigo, Maya, Schneider, Jessica, Jaenicke, Sebastian, Goesmann, Alexander, Pühler, Alfred, Jaeger, Karl-Erich, and Ernst, Joachim F. “The structure of the Cyberlindnera jadinii genome and its relation to Candida utilis analyzed by the occurrence of single nucleotide polymorphisms”. Journal of Biotechnology 211 (2015): 20-30.
PUB | DOI | WoS | PubMed | Europe PMC
 
[21]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900131
Pauli, Martina, Chakarov, Nayden, Rupp, Oliver, Kalinowski, Jörn, Goesmann, Alexander, Sorenson, Michael, Krüger, Oliver, and Hoffman, Joseph. “De novo assembly of the dual transcriptomes of a polymorphic raptor species and its malarial parasite”. BMC Genomics 16 (2015): 1038.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[20]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2718773
Wippermann, Anna, Rupp, Oliver, Brinkrolf, Karina, Hoffrogge, Raimund, and Noll, Thomas. “The DNA methylation landscape of Chinese hamster ovary (CHO) DP-12 cells”. Journal of Biotechnology 199 (2015): 38-46.
PUB | DOI | WoS | PubMed | Europe PMC
 
[19]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2633946
Caspers, Barbara, Krause, E. Tobias, Hendrix, Ralf, Kopp, Michael, Rupp, Oliver, Rosentreter, Katrin, and Steinfartz, Sebastian. “The more the better - polyandry and genetic similarity are positively linked to reproductive success in a natural population of terrestrial salamanders (Salamandra salamandra)”. Molecular Ecology 23 (2014): 239-250.
PUB | DOI | WoS | PubMed | Europe PMC
 
[18]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2656819
Wippermann, Anna, Klausing, Sandra, Rupp, Oliver, Albaum, Stefan, Büntemeyer, Heino, Noll, Thomas, and Hoffrogge, Raimund. “Establishment of a CpG island microarray for analyses of genome-wide DNA methylation in Chinese hamster ovary cells”. Applied Microbiology and Biotechnology 98.2 (2014): 579-589.
PUB | DOI | WoS | PubMed | Europe PMC
 
[17]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676552
Becker, Jennifer, Timmermann, Christina, Rupp, Oliver, Albaum, Stefan, Brinkrolf, Karina, Goesmann, Alexander, Pühler, Alfred, Tauch, Andreas, and Noll, Thomas. “Transcriptome analyses of CHO cells with the next-generation microarray CHO41K: Development and validation by analysing the influence of the growth stimulating substance IGF-1 substitute LongR(3.)”. Journal of biotechnology 178 (2014): 23-31.
PUB | DOI | WoS | PubMed | Europe PMC
 
[16]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2656773
Rupp, Oliver, Becker, Jennifer, Brinkrolf, Karina, Timmermann, Christina, Borth, Nicole, Pühler, Alfred, Noll, Thomas, and Goesmann, Alexander. “Construction of a Public CHO Cell Line Transcript Database Using Versatile Bioinformatics Analysis Pipelines”. PLoS ONE 9.1 (2014): e85568.
PUB | DOI | WoS | PubMed | Europe PMC
 
[15]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643946
Dohm, Juliane C, Minoche, André E, Holtgräwe, Daniela, Capella-Gutiérrez, Salvador, Zakrzewski, Falk, Tafer, Hakim, Rupp, Oliver, Rosleff Sörensen, Thomas, Stracke, Ralf, Reinhardt, Richard, Goesmann, Alexander, Kraft, Thomas, Schulz, Britta, Stadler, Peter F, Schmidt, Thomas, Gabaldón, Toni, Lehrach, Hans, Weisshaar, Bernd, and Himmelbauer, Heinz. “The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)”. Nature 505.7484 (2014): 546-549.
PUB | DOI | WoS | PubMed | Europe PMC
 
[14]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693310
Wibberg, Daniel, Jelonek, Lukas, Rupp, Oliver, Kröber, Magdalena, Goesmann, Alexander, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Transcriptome analysis of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 applying high-throughput sequencing of expressed sequence tags (ESTs)”. Fungal Biology 118.9-10 (2014): 800-813.
PUB | DOI | WoS | PubMed | Europe PMC
 
[13]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2634909
Drechsler, Axel, Geller, Daniel, Freund, Katharina, Schmeller, Dirk S., Künzel, Sven, Rupp, Oliver, Loyau, Adeline, Denoël, Mathieu, Valbuena-Ureña, Emilio, and Steinfartz, Sebastian. “What remains from a 454 run: estimation of success rates of microsatellite loci development in selected newt species (Calotriton asper, Lissotriton helveticus, and Triturus cristatus) and comparison with Illumina-based approaches”. Ecology and Evolution 3.11 (2013): 3947-3957.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[12]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2549908
Wibberg, Daniel, Jelonek, Lukas, Rupp, Oliver, Kröber, Magdalena, Eikmeyer, Felix Gregor, Goesmann, Alexander, Hartmann, Anton, Borriss, Rainer, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14”. Journal of Biotechnology 167.2 (2013): 142-155.
PUB | DOI | WoS | PubMed | Europe PMC
 
[11]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2606943
Vences, Miguel, Hauswaldt, Susanne, Steinfartz, Sebastian, Rupp, Oliver, Goesmann, Alexander, Künzel, Sven, Orozco-Terwengel, Pablo, Vieites, David R, Nieto-Roman, Sandra, Haas, Sabrina, Laugsch, Clara, Gehara, Marcelo, Bruchmann, Sebastian, Pabijan, Maciej, Ludewig, Ann-Kathrin, Rudert, Dirk, Angelini, Claudio, Borkin, Leo J, Crochet, Pierre-André, Crottini, Angelica, Dubois, Alain, Ficetola, Gentile Francesco, Galán, Pedro, Geniez, Philippe, Hachtel, Monika, Jovanovic, Olga, Litvinchuk, Spartak N, Lymberakis, Petros, Ohler, Annemarie, and Smirnov, Nazar A. “Radically different phylogeographies and patterns of genetic variation in two European brown frogs, genus Rana”. Molecular phylogenetics and evolution 68.3 (2013): 657-670.
PUB | DOI | WoS | PubMed | Europe PMC
 
[10]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2615581
Brinkrolf, Karina, Rupp, Oliver, Laux, Holger, Kollin, Florian, Ernst, Wolfgang, Linke, Burkhard, Kofler, Rudolf, Romand, Sandrine, Hesse, Friedemann, Budach, Wolfgang E, Galosy, Sybille, Müller, Dethardt, Noll, Thomas, Wienberg, Johannes, Jostock, Thomas, Leonard, Mark, Grillari, Johannes, Tauch, Andreas, Goesmann, Alexander, Helk, Bernhard, Mott, John E, Pühler, Alfred, and Borth, Nicole. “Chinese hamster genome sequenced from sorted chromosomes”. Nature Biotechnology 31.8 (2013): 694-695.
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645668
Bogen, Christian, Al-Dilaimi, Arwa, Albersmeier, Andreas, Wichmann, Julian, Grundmann, Michael, Rupp, Oliver, Lauersen, Kyle J., Blifernez-Klassen, Olga, Kalinowski, Jörn, Goesmann, Alexander, Mussgnug, Jan H., and Kruse, Olaf. “Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production”. BMC Genomics 14.1 (2013): 926.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[8]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529202
Zakrzewski, Martha, Bekel, Thomas, Ander, Christina, Pühler, Alfred, Rupp, Oliver, Stoye, Jens, Schlüter, Andreas, and Goesmann, Alexander. “MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets”. Journal of Biotechnology 167.2 (2013): 156-165.
PUB | DOI | WoS | PubMed | Europe PMC
 
[7]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2501364
Meleady, Paula, Hoffrogge, Raimund, Henry, Michael, Rupp, Oliver, Bort, Juan Hernandez, Clarke, Colin, Brinkrolf, Karina, Kelly, Shane, Müller, Benjamin, Doolan, Padraig, Hackl, Matthias, Beckmann, Tim, Noll, Thomas, Grillari, Johannes, Barron, Niall, Pühler, Alfred, Clynes, Martin, and Borth, Nicole. “Utilization and evaluation of CHO-specific sequence databases for mass spectrometry based proteomics”. Biotechnology and Bioengineering 109.6 (2012): 1386-1394.
PUB | DOI | WoS | PubMed | Europe PMC
 
[6]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2474002
Schneider, Jessica, Rupp, Oliver, Trost, Eva, Jaenicke, Sebastian, Passoth, V., Goesmann, Alexander, Tauch, Andreas, and Brinkrolf, Karina. “Genome sequence of Wickerhamomyces anomalus DSM 6766 reveals genetic basis of biotechnologically important antimicrobial activities”. FEMS Yeast Research 12.3 (2012): 382-386.
PUB | DOI | WoS | PubMed | Europe PMC
 
[5]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2478526
Hackl, Matthias, Jadhav, Vaibhav, Jakobi, Tobias, Rupp, Oliver, Brinkrolf, Karina, Goesmann, Alexander, Pühler, Alfred, Noll, Thomas, Borth, Nicole, and Grillari, Johannes. “Computational identification of microRNA gene loci and precursor microRNA sequences in CHO cell lines”. Journal of Biotechnology 158.3 (2012): 151-155.
PUB | DOI | WoS | PubMed | Europe PMC
 
[4]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354731
Wibberg, Daniel, Blom, Jochen, Jaenicke, Sebastian, Kollin, Florian, Rupp, Oliver, Scharf, Birgit, Schneiker-Bekel, Susanne, Szczepanowski, Rafael, Goesmann, Alexander, Setubal, Joao Carlos, Schmitt, Rüdiger, Pühler, Alfred, and Schlüter, Andreas. “Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid”. Journal of Biotechnology 155.1 (2011): 50-62.
PUB | DOI | WoS | PubMed | Europe PMC
 
[3]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396576
Becker, Jennifer, Hackel, M, Jakobi, Tobias, Rupp, Oliver, Schneider, Jessica, Szczepanowski, Rafael, Bekel, Thomas, Borth, N, Goesmann, Alexander, Grillari, J, Kaltschmidt, Christian, Noll, Thomas, Pühler, Alfred, Tauch, Andreas, and Brinkrolf, Karina. “Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing”. Journal of Biotechnology 156.3 (2011): 227-235.
PUB | DOI | WoS | PubMed | Europe PMC
 
[2]
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2453768
Becker, Jennifer, Timmermann, Christina, Jakobi, Tobias, Rupp, Oliver, Szczepanowski, Rafael, Hackl, Matthias, Goesmann, Alexander, Tauch, Andreas, Borth, Nicole, Grillari, Johannes, Pühler, Alfred, Noll, Thomas, and Brinkrolf, Karina. “Next-generation sequencing of the CHO cell transcriptome”. BMC Proceedings 5.Suppl. 8 (2011): P6.
PUB | DOI
 
[1]
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634447
Bekel, Thomas, Henckel, Kolja, Küster, Helge, Meyer, Folker, Mittard-Runte, Virginie, Neuweger, Heiko, Paarmann, Daniel, Rupp, Oliver, Zakrzewski, Martha, Pühler, Alfred, Stoye, Jens, and Goesmann, Alexander. “The Sequence Analysis and Management System - SAMS-2.0: Data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies”. Journal of Biotechnology 140.1-2 (2009): 3-12.
PUB | DOI | WoS | PubMed | Europe PMC
 

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Zitationsstil: mla

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22 Publikationen

Alle markieren

[22]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782605
Rupp, Oliver, Brinkrolf, Karina, Buerth, Christoph, Kunigo, Maya, Schneider, Jessica, Jaenicke, Sebastian, Goesmann, Alexander, Pühler, Alfred, Jaeger, Karl-Erich, and Ernst, Joachim F. “The structure of the Cyberlindnera jadinii genome and its relation to Candida utilis analyzed by the occurrence of single nucleotide polymorphisms”. Journal of Biotechnology 211 (2015): 20-30.
PUB | DOI | WoS | PubMed | Europe PMC
 
[21]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900131
Pauli, Martina, Chakarov, Nayden, Rupp, Oliver, Kalinowski, Jörn, Goesmann, Alexander, Sorenson, Michael, Krüger, Oliver, and Hoffman, Joseph. “De novo assembly of the dual transcriptomes of a polymorphic raptor species and its malarial parasite”. BMC Genomics 16 (2015): 1038.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[20]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2718773
Wippermann, Anna, Rupp, Oliver, Brinkrolf, Karina, Hoffrogge, Raimund, and Noll, Thomas. “The DNA methylation landscape of Chinese hamster ovary (CHO) DP-12 cells”. Journal of Biotechnology 199 (2015): 38-46.
PUB | DOI | WoS | PubMed | Europe PMC
 
[19]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2633946
Caspers, Barbara, Krause, E. Tobias, Hendrix, Ralf, Kopp, Michael, Rupp, Oliver, Rosentreter, Katrin, and Steinfartz, Sebastian. “The more the better - polyandry and genetic similarity are positively linked to reproductive success in a natural population of terrestrial salamanders (Salamandra salamandra)”. Molecular Ecology 23 (2014): 239-250.
PUB | DOI | WoS | PubMed | Europe PMC
 
[18]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2656819
Wippermann, Anna, Klausing, Sandra, Rupp, Oliver, Albaum, Stefan, Büntemeyer, Heino, Noll, Thomas, and Hoffrogge, Raimund. “Establishment of a CpG island microarray for analyses of genome-wide DNA methylation in Chinese hamster ovary cells”. Applied Microbiology and Biotechnology 98.2 (2014): 579-589.
PUB | DOI | WoS | PubMed | Europe PMC
 
[17]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676552
Becker, Jennifer, Timmermann, Christina, Rupp, Oliver, Albaum, Stefan, Brinkrolf, Karina, Goesmann, Alexander, Pühler, Alfred, Tauch, Andreas, and Noll, Thomas. “Transcriptome analyses of CHO cells with the next-generation microarray CHO41K: Development and validation by analysing the influence of the growth stimulating substance IGF-1 substitute LongR(3.)”. Journal of biotechnology 178 (2014): 23-31.
PUB | DOI | WoS | PubMed | Europe PMC
 
[16]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2656773
Rupp, Oliver, Becker, Jennifer, Brinkrolf, Karina, Timmermann, Christina, Borth, Nicole, Pühler, Alfred, Noll, Thomas, and Goesmann, Alexander. “Construction of a Public CHO Cell Line Transcript Database Using Versatile Bioinformatics Analysis Pipelines”. PLoS ONE 9.1 (2014): e85568.
PUB | DOI | WoS | PubMed | Europe PMC
 
[15]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643946
Dohm, Juliane C, Minoche, André E, Holtgräwe, Daniela, Capella-Gutiérrez, Salvador, Zakrzewski, Falk, Tafer, Hakim, Rupp, Oliver, Rosleff Sörensen, Thomas, Stracke, Ralf, Reinhardt, Richard, Goesmann, Alexander, Kraft, Thomas, Schulz, Britta, Stadler, Peter F, Schmidt, Thomas, Gabaldón, Toni, Lehrach, Hans, Weisshaar, Bernd, and Himmelbauer, Heinz. “The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)”. Nature 505.7484 (2014): 546-549.
PUB | DOI | WoS | PubMed | Europe PMC
 
[14]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693310
Wibberg, Daniel, Jelonek, Lukas, Rupp, Oliver, Kröber, Magdalena, Goesmann, Alexander, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Transcriptome analysis of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 applying high-throughput sequencing of expressed sequence tags (ESTs)”. Fungal Biology 118.9-10 (2014): 800-813.
PUB | DOI | WoS | PubMed | Europe PMC
 
[13]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2634909
Drechsler, Axel, Geller, Daniel, Freund, Katharina, Schmeller, Dirk S., Künzel, Sven, Rupp, Oliver, Loyau, Adeline, Denoël, Mathieu, Valbuena-Ureña, Emilio, and Steinfartz, Sebastian. “What remains from a 454 run: estimation of success rates of microsatellite loci development in selected newt species (Calotriton asper, Lissotriton helveticus, and Triturus cristatus) and comparison with Illumina-based approaches”. Ecology and Evolution 3.11 (2013): 3947-3957.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[12]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2549908
Wibberg, Daniel, Jelonek, Lukas, Rupp, Oliver, Kröber, Magdalena, Eikmeyer, Felix Gregor, Goesmann, Alexander, Hartmann, Anton, Borriss, Rainer, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14”. Journal of Biotechnology 167.2 (2013): 142-155.
PUB | DOI | WoS | PubMed | Europe PMC
 
[11]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2606943
Vences, Miguel, Hauswaldt, Susanne, Steinfartz, Sebastian, Rupp, Oliver, Goesmann, Alexander, Künzel, Sven, Orozco-Terwengel, Pablo, Vieites, David R, Nieto-Roman, Sandra, Haas, Sabrina, Laugsch, Clara, Gehara, Marcelo, Bruchmann, Sebastian, Pabijan, Maciej, Ludewig, Ann-Kathrin, Rudert, Dirk, Angelini, Claudio, Borkin, Leo J, Crochet, Pierre-André, Crottini, Angelica, Dubois, Alain, Ficetola, Gentile Francesco, Galán, Pedro, Geniez, Philippe, Hachtel, Monika, Jovanovic, Olga, Litvinchuk, Spartak N, Lymberakis, Petros, Ohler, Annemarie, and Smirnov, Nazar A. “Radically different phylogeographies and patterns of genetic variation in two European brown frogs, genus Rana”. Molecular phylogenetics and evolution 68.3 (2013): 657-670.
PUB | DOI | WoS | PubMed | Europe PMC
 
[10]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2615581
Brinkrolf, Karina, Rupp, Oliver, Laux, Holger, Kollin, Florian, Ernst, Wolfgang, Linke, Burkhard, Kofler, Rudolf, Romand, Sandrine, Hesse, Friedemann, Budach, Wolfgang E, Galosy, Sybille, Müller, Dethardt, Noll, Thomas, Wienberg, Johannes, Jostock, Thomas, Leonard, Mark, Grillari, Johannes, Tauch, Andreas, Goesmann, Alexander, Helk, Bernhard, Mott, John E, Pühler, Alfred, and Borth, Nicole. “Chinese hamster genome sequenced from sorted chromosomes”. Nature Biotechnology 31.8 (2013): 694-695.
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645668
Bogen, Christian, Al-Dilaimi, Arwa, Albersmeier, Andreas, Wichmann, Julian, Grundmann, Michael, Rupp, Oliver, Lauersen, Kyle J., Blifernez-Klassen, Olga, Kalinowski, Jörn, Goesmann, Alexander, Mussgnug, Jan H., and Kruse, Olaf. “Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production”. BMC Genomics 14.1 (2013): 926.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[8]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529202
Zakrzewski, Martha, Bekel, Thomas, Ander, Christina, Pühler, Alfred, Rupp, Oliver, Stoye, Jens, Schlüter, Andreas, and Goesmann, Alexander. “MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets”. Journal of Biotechnology 167.2 (2013): 156-165.
PUB | DOI | WoS | PubMed | Europe PMC
 
[7]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2501364
Meleady, Paula, Hoffrogge, Raimund, Henry, Michael, Rupp, Oliver, Bort, Juan Hernandez, Clarke, Colin, Brinkrolf, Karina, Kelly, Shane, Müller, Benjamin, Doolan, Padraig, Hackl, Matthias, Beckmann, Tim, Noll, Thomas, Grillari, Johannes, Barron, Niall, Pühler, Alfred, Clynes, Martin, and Borth, Nicole. “Utilization and evaluation of CHO-specific sequence databases for mass spectrometry based proteomics”. Biotechnology and Bioengineering 109.6 (2012): 1386-1394.
PUB | DOI | WoS | PubMed | Europe PMC
 
[6]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2474002
Schneider, Jessica, Rupp, Oliver, Trost, Eva, Jaenicke, Sebastian, Passoth, V., Goesmann, Alexander, Tauch, Andreas, and Brinkrolf, Karina. “Genome sequence of Wickerhamomyces anomalus DSM 6766 reveals genetic basis of biotechnologically important antimicrobial activities”. FEMS Yeast Research 12.3 (2012): 382-386.
PUB | DOI | WoS | PubMed | Europe PMC
 
[5]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2478526
Hackl, Matthias, Jadhav, Vaibhav, Jakobi, Tobias, Rupp, Oliver, Brinkrolf, Karina, Goesmann, Alexander, Pühler, Alfred, Noll, Thomas, Borth, Nicole, and Grillari, Johannes. “Computational identification of microRNA gene loci and precursor microRNA sequences in CHO cell lines”. Journal of Biotechnology 158.3 (2012): 151-155.
PUB | DOI | WoS | PubMed | Europe PMC
 
[4]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354731
Wibberg, Daniel, Blom, Jochen, Jaenicke, Sebastian, Kollin, Florian, Rupp, Oliver, Scharf, Birgit, Schneiker-Bekel, Susanne, Szczepanowski, Rafael, Goesmann, Alexander, Setubal, Joao Carlos, Schmitt, Rüdiger, Pühler, Alfred, and Schlüter, Andreas. “Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid”. Journal of Biotechnology 155.1 (2011): 50-62.
PUB | DOI | WoS | PubMed | Europe PMC
 
[3]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396576
Becker, Jennifer, Hackel, M, Jakobi, Tobias, Rupp, Oliver, Schneider, Jessica, Szczepanowski, Rafael, Bekel, Thomas, Borth, N, Goesmann, Alexander, Grillari, J, Kaltschmidt, Christian, Noll, Thomas, Pühler, Alfred, Tauch, Andreas, and Brinkrolf, Karina. “Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing”. Journal of Biotechnology 156.3 (2011): 227-235.
PUB | DOI | WoS | PubMed | Europe PMC
 
[2]
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2453768
Becker, Jennifer, Timmermann, Christina, Jakobi, Tobias, Rupp, Oliver, Szczepanowski, Rafael, Hackl, Matthias, Goesmann, Alexander, Tauch, Andreas, Borth, Nicole, Grillari, Johannes, Pühler, Alfred, Noll, Thomas, and Brinkrolf, Karina. “Next-generation sequencing of the CHO cell transcriptome”. BMC Proceedings 5.Suppl. 8 (2011): P6.
PUB | DOI
 
[1]
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634447
Bekel, Thomas, Henckel, Kolja, Küster, Helge, Meyer, Folker, Mittard-Runte, Virginie, Neuweger, Heiko, Paarmann, Daniel, Rupp, Oliver, Zakrzewski, Martha, Pühler, Alfred, Stoye, Jens, and Goesmann, Alexander. “The Sequence Analysis and Management System - SAMS-2.0: Data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies”. Journal of Biotechnology 140.1-2 (2009): 3-12.
PUB | DOI | WoS | PubMed | Europe PMC
 

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