13 Publikationen

Alle markieren

[13]
2019 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2932883
Dörr, D., Stoye, J.: A Perspective on Comparative and Functional Genomics. In: Warnow, T. (ed.) Bioinformatics and Phylogenetics. Computational Biology. 29, p. 361-372. Springer , Cham (2019).
PUB | DOI
 
[12]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919005
Schulz, T., Stoye, J., Dörr, D.: GraphTeams. A method for discovering spatial gene clusters in Hi-C sequencing data. BMC Genomics. 19, : 308 (2018).
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[11]
2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2913922
Dörr, D., Feijão, P., Stoye, J.: Family-Free Genome Comparison. In: Setubal, J.C., Stadler, P., and Stoye, J. (eds.) Comparative Genomics: Methods and Protocols. Methods in Molecular Biology. 1704, p. 331-342. Springer Verlag, New York (2018).
PUB
 
[10]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2912492
Luhmann, N., Dörr, D., Chauve, C.: Comparative scaffolding and gap filling of ancient bacterial genomes applied to two ancient Yersinia pestis genomes. Microbial Genomics. 3, (2017).
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911814
Dörr, D., Balaban, M., Feijão, P., Chauve, C.: The gene family-free median of three. Algorithms for Molecular Biology. 12, : 14 (2017).
PUB | DOI | WoS | PubMed | Europe PMC
 
[8]
2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2913016
Schulz, T., Stoye, J., Dörr, D.: Finding Teams in Graphs and its Application to Spatial Gene Cluster Discovery. Proceedings of RECOMB-CG 2017. Lecture Notes in Bioinformatics. 1704, p. 197-212. Springer Verlag, Berlin (2017).
PUB | DOI
 
[7]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909967
Dörr, D., Kowada, L.A.B., Soares de Araujo, F.E., Deshpande, S., Dantas, S., Moret, B.M.E., Stoye, J.: New Genome Similarity Measures based on Conserved Gene Adjacencies. Journal of Computational Biology. 24, 616-634 (2017).
PUB | DOI | WoS | PubMed | Europe PMC
 
[6]
2016 | Bielefelder E-Dissertation | PUB-ID: 2902049
Dörr, D.: Gene family-free genome comparison. Universität Bielefeld, Bielefeld (2016).
PUB | PDF
 
[5]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2687033
Dörr, D., Stoye, J., Böcker, S., Jahn, K.: Identifying Gene Clusters by Discovering Common Intervals in Indeterminate Strings. BMC Genomics. 15, S2 (2014).
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[4]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685362
Lechner, M., Hernandez-Rosales, M., Dörr, D., Wieseke, N., Thévenin, A., Stoye, J., Hartmann, R.K., Prohaska, S.J., Stadler, P.F.: Orthology Detection Combining Clustering and Synteny for Very Large Datasets. PLoS ONE. 9, e105015 (2014).
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[3]
2013 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2611648
Dias Vieira Braga, M., Chauve, C., Dörr, D., Jahn, K., Stoye, J., Thévenin, A., Wittler, R.: The Potential of Family-Free Genome Comparison. In: Chauve, C., El-Mabrouk, N., and Tannier, E. (eds.) Models and Algorithms for Genome Evolution. Computational Biology Series. 19, p. 287-307. Springer Verlag (2013).
PUB | DOI
 
[2]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2560353
Dörr, D., Gronau, I., Moran, S., Yavneh, I.: Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions. Algorithms for Molecular Biology. 7, 22 (2012).
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[1]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2512642
Dörr, D., Thévenin, A., Stoye, J.: Gene family assignment-free comparative genomics. BMC Bioinformatics. 13, S3 (2012).
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 

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13 Publikationen

Alle markieren

[13]
2019 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2932883
Dörr, D., Stoye, J.: A Perspective on Comparative and Functional Genomics. In: Warnow, T. (ed.) Bioinformatics and Phylogenetics. Computational Biology. 29, p. 361-372. Springer , Cham (2019).
PUB | DOI
 
[12]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919005
Schulz, T., Stoye, J., Dörr, D.: GraphTeams. A method for discovering spatial gene clusters in Hi-C sequencing data. BMC Genomics. 19, : 308 (2018).
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[11]
2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2913922
Dörr, D., Feijão, P., Stoye, J.: Family-Free Genome Comparison. In: Setubal, J.C., Stadler, P., and Stoye, J. (eds.) Comparative Genomics: Methods and Protocols. Methods in Molecular Biology. 1704, p. 331-342. Springer Verlag, New York (2018).
PUB
 
[10]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2912492
Luhmann, N., Dörr, D., Chauve, C.: Comparative scaffolding and gap filling of ancient bacterial genomes applied to two ancient Yersinia pestis genomes. Microbial Genomics. 3, (2017).
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911814
Dörr, D., Balaban, M., Feijão, P., Chauve, C.: The gene family-free median of three. Algorithms for Molecular Biology. 12, : 14 (2017).
PUB | DOI | WoS | PubMed | Europe PMC
 
[8]
2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2913016
Schulz, T., Stoye, J., Dörr, D.: Finding Teams in Graphs and its Application to Spatial Gene Cluster Discovery. Proceedings of RECOMB-CG 2017. Lecture Notes in Bioinformatics. 1704, p. 197-212. Springer Verlag, Berlin (2017).
PUB | DOI
 
[7]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909967
Dörr, D., Kowada, L.A.B., Soares de Araujo, F.E., Deshpande, S., Dantas, S., Moret, B.M.E., Stoye, J.: New Genome Similarity Measures based on Conserved Gene Adjacencies. Journal of Computational Biology. 24, 616-634 (2017).
PUB | DOI | WoS | PubMed | Europe PMC
 
[6]
2016 | Bielefelder E-Dissertation | PUB-ID: 2902049
Dörr, D.: Gene family-free genome comparison. Universität Bielefeld, Bielefeld (2016).
PUB | PDF
 
[5]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2687033
Dörr, D., Stoye, J., Böcker, S., Jahn, K.: Identifying Gene Clusters by Discovering Common Intervals in Indeterminate Strings. BMC Genomics. 15, S2 (2014).
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[4]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685362
Lechner, M., Hernandez-Rosales, M., Dörr, D., Wieseke, N., Thévenin, A., Stoye, J., Hartmann, R.K., Prohaska, S.J., Stadler, P.F.: Orthology Detection Combining Clustering and Synteny for Very Large Datasets. PLoS ONE. 9, e105015 (2014).
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[3]
2013 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2611648
Dias Vieira Braga, M., Chauve, C., Dörr, D., Jahn, K., Stoye, J., Thévenin, A., Wittler, R.: The Potential of Family-Free Genome Comparison. In: Chauve, C., El-Mabrouk, N., and Tannier, E. (eds.) Models and Algorithms for Genome Evolution. Computational Biology Series. 19, p. 287-307. Springer Verlag (2013).
PUB | DOI
 
[2]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2560353
Dörr, D., Gronau, I., Moran, S., Yavneh, I.: Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions. Algorithms for Molecular Biology. 7, 22 (2012).
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[1]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2512642
Dörr, D., Thévenin, A., Stoye, J.: Gene family assignment-free comparative genomics. BMC Bioinformatics. 13, S3 (2012).
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 

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Zitationsstil: lncs

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