164 Publikationen
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2969067Reardon-Robinson, M.E., Nguyen, M.T., Sanchez, B.C., Osipiuk, J., Rückert, C., Chang, C., Chen, B., Nagvekar, R., Joachimiak, A., Tauch, A., Das, A. & Ton-That, H. (2023). A cryptic oxidoreductase safeguards oxidative protein folding in Corynebacterium diphtheriae. Proceedings of the National Academy of Sciences of the United States of America, 120(8): e2208675120. National Academy of Sciences. doi:10.1073/pnas.2208675120.
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2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2962518Scheible, M., Nguyen, C.T., Luong, T.T., Lee, J.H., Chen, Y.-W., Chang, C., Wittchen, M., Camacho, M.I., Tiner, B.L., Wu, C., Tauch, A., Das, A. & Ton-That, H. (2022). The Fused Methionine Sulfoxide Reductase MsrAB Promotes Oxidative Stress Defense and Bacterial Virulence in Fusobacterium nucleatum. mBio: e03022-21. American Society for Microbiology. doi:10.1128/mbio.03022-21.
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2021 | Herausgeber*in Sammelwerk | Veröffentlicht | PUB-ID: 2958276Future-Oriented Analysis of Life Sciences Data by Artificial Intelligence : Contributions of the German Network for Bioinformatics Infrastructure. (2021). Future-Oriented Analysis of Life Sciences Data by Artificial Intelligence : Contributions of the German Network for Bioinformatics Infrastructure. (A. Pühler, A. Tauch & German Network for Bioinformatics Infrastructure (de.NBI), Hrsg.). Bielefeld: Center for Biotechnology, de.NBI Administration Office. doi:10.4119/unibi/2958276.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956162Escorcia-Rodriguez, J.M., Tauch, A. & Freyre-Gonzalez, J.A. (2021). Corynebacterium glutamicum Regulation beyond Transcription: Organizing Principles and Reconstruction of an Extended Regulatory Network Incorporating Regulations Mediated by Small RNA and Protein-Protein Interactions. Microorganisms, 9(7): 1395. MDPI. doi:10.3390/microorganisms9071395.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955516Wu, C., Chen, Y.-W., Scheible, M., Chang, C., Wittchen, M., Lee, J.H., Luong, T.T., Tiner, B.L., Tauch, A., Das, A. & Ton-That, H. (2021). Genetic and molecular determinants of polymicrobial interactions in Fusobacterium nucleatum. Proceedings of the National Academy of Sciences of the United States of America, 118(23): e2006482118. National Academy of Sciences. doi:10.1073/pnas.2006482118.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952730Luong, T.T., Nguyen, M.T., Chen, Y.-W., Chang, C., Lee, J.H., Wittchen, M., Ton-That, H.L., Cruz, M., Garsin, D.A., Das, A., Tauch, A. & Ton-That, H. (2021). Ribonuclease J-Mediated mRNA Turnover Modulates Cell Shape, Metabolism and Virulence in Corynebacterium diphtheriae. Microorganisms, 9(2): 389. MDPI. doi:10.3390/microorganisms9020389.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952732Parise, D., Dornelles Parise, M.T., Pinto Gomide, A.C., Aburjaile, F.F., Kato, R.B., Salgado-Albarran, M., Tauch, A., de Carvalho Azevedo, V.A. & Baumbach, J. (2021). The Transcriptional Regulatory Network of Corynebacterium pseudotuberculosis. Microorganisms, 9(2): 415. MDPI. doi:10.3390/microorganisms9020415.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2953592Parise, D., Parise, M.T.D., Kataka, E., Kato, R.B., List, M., Tauch, A., Azevedo, V.A. de C. & Baumbach, J. (2021). On the Consistency between Gene Expression and the Gene Regulatory Network of Corynebacterium glutamicum. Network and systems medicine, 4(1), 51-59. Mary Ann Liebert. doi:10.1089/nsm.2020.0014.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944331Escorcia-Rodriguez, J.M., Tauch, A. & Freyre-Gonzalez, J.A. (2020). Abasy Atlas v2.2: The most comprehensive and up-to-date inventory of meta-curated, historical, bacterial regulatory networks, their completeness and system-level characterization. Computational and structural biotechnology journal, 18, 1228-1237. Elsevier. doi:10.1016/j.csbj.2020.05.015.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943411Parise, M.T.D., Parise, D., Kato, R.B., Pauling, J.K., Tauch, A., Azevedo, V.A. de C. & Baumbach, J. (2020). CoryneRegNet 7, the reference database and analysis platform for corynebacterial gene regulatory networks. Scientific data, 7(1): 142. Springer Nature. doi:10.1038/s41597-020-0484-9.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956709Wibberg, D., Batut, B., Belmann, P., Blom, J., Glöckner, F.O., Grüning, B., Hoffmann, N., Kleinbölting, N., Rahn, R., Rey, M., Scholz, U., Sharan, M., Tauch, A., Trojahn, U., Usadel, B. & Kohlbacher, O. (2019). The de.NBI / ELIXIR-DE training platform - Bioinformatics training in Germany and across Europe within ELIXIR. F1000Research, 8: 1877. F1000 Research Ltd. doi:10.12688/f1000research.20244.1.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948766Wibberg, D., Batut, B., Belmann, P., Blom, J., Glockner, F.O., Gruning, B., Hoffmann, N., Kleinbölting, N., Rahn, R., Rey, M., Scholz, U., Sharan, M., Tauch, A., Trojahn, U., Usadel, B. & Kohlbacher, O. (2019). The de.NBI / ELIXIR-DE training platform - Bioinformatics training in Germany and across Europe within ELIXIR. F1000Research, 8: 1877 . F1000 Research Ltd. . doi:10.12688/f1000research.20244.2.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920311Abdali, N., Younas, F., Mafakheri, S., Pothula, K.R., Kleinekathoefer, U., Tauch, A. & Benz, R. (2018). Identification and characterization of smallest pore-forming protein in the cell wall of pathogenic Corynebacterium urealyticum DSM 7109. BMC BIOCHEMISTRY, 19(1): 18. Biomed Central Ltd. doi:10.1186/s12858-018-0093-9.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916925Engel, K., Sauer, J., Jünemann, S., Winkler, A., Wibberg, D., Kalinowski, J., Tauch, A. & Caspers, B. (2018). Individual- and Species-Specific Skin Microbiomes in Three Different Estrildid Finch Species Revealed by 16S Amplicon Sequencing. Microbial Ecology, 76(2), 518-529. Springer Nature. doi:10.1007/s00248-017-1130-8.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917296Wittchen, M., Busche, T., Gaspar, A.H., Lee, J.H., Ton-That, H., Kalinowski, J. & Tauch, A. (2018). Transcriptome sequencing of the human pathogen Corynebacterium diphtheriae NCTC 13129 provides detailed insights into its transcriptional landscape and into DtxR-mediated transcriptional regulation. BMC Genomics, 19(1): 82. Springer Nature. doi:10.1186/s12864-018-4481-8.
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2017 | Zeitschriftenaufsatz | PUB-ID: 2911058Tauch, A. & Al-Dilaimi, A. (2017). Bioinformatics in Germany: toward a national-level infrastructure. Briefings in Bioinformatics, 20(2), 370-374. Oxford Univ. Press. doi:10.1093/bib/bbx040.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913472Rodríguez-Castillo, J.G., Pino, C., Niño, L.F., Rozo, J.C., Llerena-Polo, C., Parra-López, C.A., Tauch, A. & Murcia-Aranguren, M.I. (2017). Comparative genomic analysis of Mycobacterium tuberculosis Beijing-like strains revealed specific genetic variations associated with virulence and drug resistance. Infect Genet Evol, 54, 314-323. Elsevier BV. doi:10.1016/j.meegid.2017.07.022.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907317Freyre-González, J.A. & Tauch, A. (2017). Functional architecture and global properties of the Corynebacterium glutamicum regulatory network: Novel insights from a dataset with a high genomic coverage. Journal of Biotechnology, 257, 199-210. Elsevier BV. doi:10.1016/j.jbiotec.2016.10.025.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908585Zuñiga-Bahamon, A., Tobar-Tosse, F., Guillermo-Ortega, J., Wibberg, D. & Tauch, A. (2016). Draft Genome Sequence of Streptococcus anginosus BVI, a New Vaginal Pathogen Candidate. Genome Announcements, 4(6): e01417-16. American Society for Microbiology. doi:10.1128/genomea.01417-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904541Ibarra-Arellano, M.A., Campos-Gonzalez, A.I., Trevino-Quintanilla, L.G., Tauch, A. & Freyre-Gonzalez, J.A. (2016). Abasy Atlas: a comprehensive inventory of systems, global network properties and systems-level elements across bacteria. DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION, 2016: baw089. Oxford Univ Press. doi:10.1093/database/baw089.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904501Tauch, A., Fernández-Natal, I. & Soriano, F. (2016). A microbiological and clinical review on Corynebacterium kroppenstedtii. International Journal of Infectious Diseases, 48, 33-39. Elsevier BV. doi:10.1016/j.ijid.2016.04.023.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907319Fernández-Natal, I., Rodríguez-Lázaro, D., Marrodán-Ciordia, T., Sáez-Nieto, J.A., Valdezate, S., Rodríguez-Pollán, H., Tauch, A. & Soriano, F. (2016). Characterization and antimicrobial susceptibility of one antibiotic-sensitive and one multidrug-resistant Corynebacterium kroppenstedtii strain isolated from patients with granulomatous mastitis. New Microbes and New Infections, 14, 93-97. Elsevier BV. doi:10.1016/j.nmni.2016.09.006.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907322Gonzalez-Perez, M.N., Murcia, M.I., Parra-Lopez, C., Blom, J. & Tauch, A. (2016). Deciphering the virulence factors of the opportunistic pathogen Mycobacterium colombiense. New Microbes and New Infections, 14, 98-105. Elsevier BV. doi:10.1016/j.nmni.2016.09.007.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905166Soares, S.C., Geyik, H., Ramos, R.T.J., de Sá, P.H.C.G., Barbosa, E.G.V., Baumbach, J., Figueiredo, H.C.P., Miyoshi, A., Tauch, A., Silva, A. & Azevedo, V. (2016). GIPSy: Genomic island prediction software. Journal of Biotechnology, 232, 2-11. Elsevier. doi:10.1016/j.jbiotec.2015.09.008.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902951Valero-Guillén, P.L., Fernández-Natal, I., Marrodán-Ciordia, T., Tauch, A. & Soriano, F. (2016). Ether-linked lipids of Dermabacter hominis, a human skin actinobacterium. Chemistry and Physics of Lipids, 196, 24-32. Elsevier BV. doi:10.1016/j.chemphyslip.2016.02.002.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2753051Rückert, C., Albersmeier, A., Winkler, A. & Tauch, A. (2015). Complete Genome Sequence of Corynebacterium kutscheri DSM 20755, a Corynebacterial Type Strain with Remarkably Low G+C Content of Chromosomal DNA. Genome announcements, 3(3): e00571-15. American Society for Microbiology. doi:10.1128/genomeA.00571-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2753057Rückert, C., Albersmeier, A., Winkler, A. & Tauch, A. (2015). Complete Genome Sequence of Corynebacterium camporealensis DSM 44610, Isolated from the Milk of a Manchega Sheep with Subclinical Mastitis. Genome announcements, 3(3): e00572-15. American Society for Microbiology. doi:10.1128/genomeA.00572-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2756572Fernández-Natal, M.I., Soriano, F., Ariza-Miguel, J., Marrodan-Ciordia, T., Acedo, A., Hernandez, M., Tauch, A. & Rodríguez-Lázaro, D. (2015). Draft Genome Sequences of Corynebacterium kroppenstedtii CNM633/14 and CNM632/14, Multidrug-Resistant and Antibiotic-Sensitive Isolates from Nodules of Granulomatous Mastitis Patients. Genome announcements, 3(3): e00525-15. American Society for Microbiology. doi:10.1128/genomeA.00525-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2735420Rodríguez, J.G., Pino, C., Tauch, A. & Murcia, M.I. (2015). Complete Genome Sequence of the Clinical Beijing-Like StrainMycobacterium tuberculosis323 Using the PacBio Real-Time Sequencing Platform. Genome Announcements, 3(2), e00371-15. American Society for Microbiology. doi:10.1128/genomeA.00371-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2728042Merten, M., Brinkrolf, K., Albersmeier, A., Kutter, Y., Rückert, C. & Tauch, A. (2015). Complete Genome Sequence and Annotation of Corynebacterium singulare DSM 44357, Isolated from a Human Semen Specimen. Genome Announcements, 3(2): e00183-15. American Society for Microbiology. doi:10.1128/genomeA.00183-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2769395Rückert, C., Eimer, J., Winkler, A. & Tauch, A. (2015). Complete Genome Sequence of the Type Strain Corynebacterium epidermidicanis DSM 45586, Isolated from the Skin of a Dog Suffering from Pruritus. Genome announcements, 3(4): e00959-15. American Society for Microbiology. doi:10.1128/genomeA.00959-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764419Fernández-Natal, M.I., Soriano, F., Acedo, A., Hernandez, M., Tauch, A. & Rodríguez-Lázaro, D. (2015). Draft Genome Sequences of the Two Unrelated Macrolide-Resistant Corynebacterium argentoratense Strains CNM 463/05 and CNM 601/08, Isolated from Patients in the University Hospital of León, Spain. Genome announcements, 3(4): e00765-15. American Society for Microbiology. doi:10.1128/genomeA.00765-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765190Rückert, C., Kriete, M., Jaenicke, S., Winkler, A. & Tauch, A. (2015). Virulence Factor Genes Detected in the Complete Genome Sequence of Corynebacterium uterequi DSM 45634, Isolated from the Uterus of a Maiden Mare. Genome announcements, 3(4): e00783-15. American Society for Microbiology. doi:10.1128/genomeA.00783-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765197Rückert, C., Kriete, M., Jaenicke, S., Winkler, A. & Tauch, A. (2015). Complete Genome Sequence of the Type Strain Corynebacterium testudinoris DSM 44614, Recovered from Necrotic Lesions in the Mouth of a Tortoise. Genome announcements, 3(4): e00784-15. American Society for Microbiology. doi:10.1128/genomeA.00784-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2775257Rückert, C., Eimer, J., Winkler, A. & Tauch, A. (2015). Complete Genome Sequence of the Type Strain Corynebacterium mustelae DSM 45274, Isolated from Various Tissues of a Male Ferret with Lethal Sepsis. Genome announcements, 3(5): e01012-15. American Society for Microbiology. doi:10.1128/genomeA.01012-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2786809Tauch, A. & Burkovski, A. (2015). Molecular armory or niche factors: virulence determinants of Corynebacterium species. FEMS Microbiology Letters, 362(23): fnv185. Oxford Univ. Press. doi:10.1093/femsle/fnv185.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2772399Hacker, E., Tauch, A., Hasselt, K., Mattos-Guaraldi, A.L., Ott, L. & Burkovski, A. (2015). Colonization of human epithelial cell lines by Corynebacterium ulcerans from human and animal sources. Microbiology, 161(8), 1582-1591. Microbiology Society. doi:10.1099/mic.0.000121.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705365Tippelt, A., Albersmeier, A., Brinkrolf, K., Rückert, C., Fernández-Natal, I., Soriano, F. & Tauch, A. (2014). Complete Genome Sequence of Corynebacterium ureicelerivorans DSM 45051, a Lipophilic and Urea-Splitting Isolate from the Blood Culture of a Septicemia Patient. Genome announcements, 2(6). American Society for Microbiology. doi:10.1128/genomeA.01211-14.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705374Möllmann, S., Albersmeier, A., Rückert, C. & Tauch, A. (2014). Complete Genome Sequence of Corynebacterium imitans DSM 44264, Isolated from a Five-Month-Old Boy with Suspected Pharyngeal Diphtheria. Genome announcements, 2(6). American Society for Microbiology. doi:10.1128/genomeA.01210-14.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2710114Townsend, P.D., Jungwirth, B., Pojer, F., Bußmann, M., Money, V.A., Cole, S.T., Pühler, A., Tauch, A., Bott, M., Cann, M.J. & Pohl, E. (2014). The Crystal Structures of Apo and cAMP-Bound GlxR from Corynebacterium glutamicum Reveal Structural and Dynamic Changes upon cAMP Binding in CRP/FNR Family Transcription Factors. PloS one, 9(12): e113265. Public Library of Science (PLoS). doi:10.1371/journal.pone.0113265.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662834Glaub, A., Bomholt, C., Gravermann, K., Brinkrolf, K., Albersmeier, A., Rückert, C. & Tauch, A. (2014). Complete Genome Sequence of Corynebacterium falsenii DSM 44353 To Study the Evolution of Corynebacterium Cluster 3 Species. Genome announcements, 2(2). American Society for Microbiology. doi:10.1128/genomeA.00158-14.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2692360Tippelt, A., Möllmann, S., Albersmeier, A., Jaenicke, S., Rückert, C. & Tauch, A. (2014). Mycolic Acid Biosynthesis Genes in the Genome Sequence of Corynebacterium atypicum DSM 44849. Genome announcements, 2(4). American Society for Microbiology. doi:10.1128/genomeA.00845-14.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2687120Albersmeier, A., Bomholt, C., Glaub, A., Rückert, C., Soriano, F., Fernández-Natal, I. & Tauch, A. (2014). Draft Genome Sequence of the Multidrug-Resistant Clinical Isolate Dermabacter hominis 1368. Genome announcements, 2(4). American Society for Microbiology. doi:10.1128/genomeA.00728-14.
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2014 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2694187Brinkrolf, K., Hoffrogge, R., Hackl, M., Tauch, A., Baumann, M., Noll, T., Goesmann, A., Pühler, A. & Borth, N. (2014). Functional -Omics for Cell Lines and Processes - The -Omics Technologies on the Example of CHO Cells. In H. Hauser & R. Wagner (Hrsg.), Animal Cell Biotechnology In Biologics Production (S. 702). Berlin, Germany: Walter de Gruyter.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685988Jakobi, T., Brinkrolf, K., Tauch, A., Noll, T., Stoye, J., Pühler, A. & Goesmann, A. (2014). Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing. Journal of Biotechnology, 190, 64-75. Elsevier BV. doi:10.1016/j.jbiotec.2014.07.437.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676552Becker, J., Timmermann, C., Rupp, O., Albaum, S., Brinkrolf, K., Goesmann, A., Pühler, A., Tauch, A. & Noll, T. (2014). Transcriptome analyses of CHO cells with the next-generation microarray CHO41K: Development and validation by analysing the influence of the growth stimulating substance IGF-1 substitute LongR(3.). Journal of biotechnology, 178, 23-31. Elsevier BV. doi:10.1016/j.jbiotec.2014.02.021.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693409Fredrich, E., Ander, C., Stoye, J., Brune, I. & Tauch, A. (2014). Metatranskriptomik der Mikrobiota aus der menschlichen Achselhöhle. BIOspektrum, 20(5), 294-296. Springer Science + Business Media. doi:10.1007/s12268-014-0468-4.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2634035Soltan Mohammadi, N., Mafakheri, S., Abdali, N., Bárcena-Uribarri, I., Tauch, A. & Benz, R. (2013). Identification and characterization of the channel-forming protein in the cell wall of Corynebacterium amycolatum. Biochimica et biophysica acta, 1828(11), 2574-2582. Elsevier BV. doi:10.1016/j.bbamem.2013.06.024.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2634054Abdali, N., Barth, E., Norouzy, A., Schulz, R., Nau, W.M., Kleinekathöfer, U., Tauch, A. & Benz, R. (2013). Corynebacterium jeikeium jk0268 Constitutes for the 40 Amino Acid Long PorACj, Which Forms a Homooligomeric and Anion-Selective Cell Wall Channel. PloS one, 8(10): e75651. Public Library of Science (PLoS). doi:10.1371/journal.pone.0075651.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2632081Pereira, U.P., Soares, S.C., Blom, J., Leal, C.A.G., Ramos, R.T.J., Guimarães, L.C., Oliveira, L.C., Almeida, S.S., Hassan, S.S., Santos, A.R., Miyoshi, A., Silva, A., Tauch, A., Barh, D., Azevedo, V. & Figueiredo, H.C.P. (2013). In silico prediction of conserved vaccine targets in Streptococcus agalactiae strains isolated from fish, cattle, and human samples. Genetics and molecular research : GMR, 12(3), 2902-2912. Genetics and Molecular Research. doi:10.4238/2013.August.12.6.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2582332Guimarães, L.C., Soares, S.C., Albersmeier, A., Blom, J., Jaenicke, S., Azevedo, V., Soriano, F., Tauch, A. & Trost, E. (2013). Complete Genome Sequence of Corynebacterium urealyticum Strain DSM 7111, Isolated from a 9-Year-Old Patient with Alkaline-Encrusted Cystitis. Genome announcements, 1(3): e00264-13. American Society for Microbiology. doi:10.1128/genomeA.00264-13.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2552500Soares, S.C., Silva, A., Trost, E., Blom, J., Ramos, R., Carneiro, A., Ali, A., Santos, A.R., Pinto, A.C., Diniz, C., Barbosa, E.G.V., Dorella, F.A., Aburjaile, F., Rocha, F.S., Nascimento, K.K.F., Guimares, L.C., Almeida, S., Hassan, S.S., Bakhtiar, S.M., Pereira, U.P., Abreu, V.A.C., Schneider, M.P.C., Miyoshi, A., Tauch, A. & Azevedo, V. (2013). The Pan-Genome of the Animal Pathogen Corynebacterium pseudotuberculosis Reveals Differences in Genome Plasticity between the Biovar ovis and equi Strains. PLoS ONE, 8(1): e53818. Public Library of Science (PLoS). doi:10.1371/journal.pone.0053818.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2629377Bomholt, C., Glaub, A., Gravermann, K., Albersmeier, A., Brinkrolf, K., Rückert, C. & Tauch, A. (2013). Whole-Genome Sequence of the Clinical Strain Corynebacterium argentoratense DSM 44202, Isolated from a Human Throat Specimen. Genome announcements, 1(5), e00793-13. American Society for Microbiology. doi:10.1128/genomeA.00793-13.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2560776Barzantny, H., Guttmann, S., Lässig, C., Brune, I. & Tauch, A. (2013). Transcriptional control of lipid metabolism by the MarR-like regulator FamR and the global regulator GlxR in the lipophilic axilla isolateCorynebacterium jeikeiumK411. Microbial Biotechnology, 6(2), 118-130. Wiley-Blackwell. doi:10.1111/1751-7915.12004.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2614869Soares, S.C., Trost, E., Ramos, R.T.J., Carneiro, A.R., Santos, A.R., Pinto, A.C., Barbosa, E., Aburjaile, F., Ali, A., Diniz, C.A.A., Hassan, S.S., Fiaux, K., Guimarães, L.C., Bakhtiar, S.M., Pereira, U., Almeida, S.S., Abreu, V.A.C., Rocha, F.S., Dorella, F.A., Miyoshi, A., Silva, A., Azevedo, V. & Tauch, A. (2013). Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production. Journal of Biotechnology, 167(2), 135-141. Elsevier BV. doi:10.1016/j.jbiotec.2012.11.003.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548270Jungwirth, B., Sala, C., Kohl, T.A., Uplekar, S., Baumbach, J., Cole, S.T., Pühler, A. & Tauch, A. (2013). High-resolution detection of DNA binding sites of the global transcriptional regulator GlxR in Corynebacterium glutamicum. Microbiology, 159(Pt_1), 12-22. Society for General Microbiology. doi:10.1099/mic.0.062059-0.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641278Ramos, R.T.J., Carneiro, A.R., de Castro Soares, S., Barbosa, S., Varuzza, L., Orabona, G., Tauch, A., Azevedo, V., Schneider, M.P. & Silva, A. (2013). High efficiency application of a mate-paired library from next-generation sequencing to postlight sequencing: Corynebacterium pseudotuberculosis as a case study for microbial de novo genome assembly. Journal of microbiological methods, 95(3), 441-447. Elsevier BV. doi:10.1016/j.mimet.2013.06.006.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2615581Brinkrolf, K., Rupp, O., Laux, H., Kollin, F., Ernst, W., Linke, B., Kofler, R., Romand, S., Hesse, F., Budach, W.E., Galosy, S., Müller, D., Noll, T., Wienberg, J., Jostock, T., Leonard, M., Grillari, J., Tauch, A., Goesmann, A., Helk, B., Mott, J.E., Pühler, A. & Borth, N. (2013). Chinese hamster genome sequenced from sorted chromosomes. Nature Biotechnology, 31(8), 694-695. Nature Publishing Group. doi:10.1038/nbt.2645.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2584431Barreiro, C., González-Lavado, E., Brand, S., Tauch, A. & Martín, J.F. (2013). Heat Shock Proteome Analysis of Wild-Type Corynebacterium glutamicum ATCC 13032 and a Spontaneous Mutant Lacking GroEL1, a Dispensable Chaperone. Journal of bacteriology, 195(11), 2707. American Society for Microbiology. doi:10.1128/JB.00438-13.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2606908Fredrich, E., Barzantny, H., Brune, I. & Tauch, A. (2013). Daily battle against body odor: towards the activity of the axillary microbiota. Trends in microbiology, 21(6), 305-312. Elsevier BV. doi:10.1016/j.tim.2013.03.002.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2703752Fernández-Natal, I., Sáez-Nieto, J.A., Medina-Pascual, M.J., Albersmeier, A., Valdezate, S., Guerra-Laso, J.M., Rodríguez, H., Marrodán, T., Parras, T., Tauch, A. & Soriano, F. (2013). Dermabacter hominis: a usually daptomycin-resistant gram-positive organism infrequently isolated from human clinical samples. New microbes and new infections, 1(3), 35-40. Elsevier BV. doi:10.1002/2052-2975.31.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498160Schröder, J., Maus, I., Meyer, K., Wördemann, S., Blom, J., Jaenicke, S., Schneider, J., Trost, E. & Tauch, A. (2012). Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient. BMC Genomics, 13(1): 141. Springer Science + Business Media. doi:10.1186/1471-2164-13-141.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2477132Soares, S.C., Abreu, V.A.C., Ramos, R.T.J., Cerdeira, L., Silva, A., Baumbach, J., Trost, E., Tauch, A., Hirata, R.J., Mattos-Guaraldi, A.L., Miyoshi, A. & Azevedo, V. (2012). PIPS: Pathogenicity Island Prediction Software. PLoS ONE, 7(2): e30848. Public Library of Science (PLoS). doi:10.1371/journal.pone.0030848.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513347Trost, E., Blom, J., de Castro Soares, S., Huang, I.-H., Al-Dilaimi, A., Schröder, J., Jaenicke, S., Dorella, F.A., Rocha, F.S., Miyoshi, A., Azevedo, V., Schneider, M.P., Silva, A., Camello, T.C., Sabbadini, P.S., Santos, C.S., Santos, L.S., Hirata, R.J., Mattos-Guaraldi, A.L., Efstratiou, A., Schmitt, M.P., Ton-That, H. & Tauch, A. (2012). Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia. Journal of bacteriology, 194(12), 3199-3215. American Society for Microbiology. doi:10.1128/JB.00183-12.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471667Sabbadini, P.S., Assis, M.C., Trost, E., Gomes, D.L.R., Moreira, L.O., Dos Santos, C.S., Pereira, G.A., Nagao, P.E., Azevedo, V.A. de C., Hirata Junior, R., Dos Santos, A.L.S., Tauch, A. & Mattos-Guaraldi, A.L. (2012). Corynebacterium diphtheriae 67-72p hemagglutinin, characterized as the protein DIP0733, contributes to invasion and induction of apoptosis in HEp-2 cells. Microbial Pathogenesis, 52(3), 165-176. Elsevier BV. doi:10.1016/j.micpath.2011.12.003.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2474002Schneider, J., Rupp, O., Trost, E., Jaenicke, S., Passoth, V., Goesmann, A., Tauch, A. & Brinkrolf, K. (2012). Genome sequence of Wickerhamomyces anomalus DSM 6766 reveals genetic basis of biotechnologically important antimicrobial activities. FEMS Yeast Research, 12(3), 382-386. Oxford University Press (OUP). doi:10.1111/j.1567-1364.2012.00791.x.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471873Pauling, J., Rottger, R., Tauch, A., Azevedo, V. & Baumbach, J. (2012). CoryneRegNet 6.0--Updated database content, new analysis methods and novel features focusing on community demands. Nucleic Acids Research, 40(D1), D610-D614. Oxford University Press (OUP). doi:10.1093/nar/gkr883.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2544774Schneider, J., Andrea, H., Blom, J., Jaenicke, S., Rückert, C., Schorsch, C., Szczepanowski, R., Farwick, M., Goesmann, A., Pühler, A., Schaffer, S., Tauch, A., Köhler, T. & Brinkrolf, K. (2012). Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10. Eukaryotic Cell, 11(12), 1582-1583. American Society for Microbiology. doi:10.1128/EC.00258-12.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500805Barzantny, H., Schröder, J., Strotmeier, J., Fredrich, E., Brune, I. & Tauch, A. (2012). The transcriptional regulatory network of Corynebacterium jeikeium K411 and its interaction with metabolic routes contributing to human body odor formation. Journal of biotechnology, 159(3), 235-248. Elsevier BV. doi:10.1016/j.jbiotec.2012.01.021.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500812Schröder, J., Maus, I., Ostermann, A.L., Kogler, A.C. & Tauch, A. (2012). Binding of the IclR-type regulator HutR in the histidine utilization (hut) gene cluster of the human pathogen Corynebacterium resistens DSM 45100. FEMS Microbiology Letters, 331(2), 136-143. Oxford University Press (OUP). doi:10.1111/j.1574-6968.2012.02564.x.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2530885Brinkrolf, K., Schneider, J., Knecht, M., Rückert, C. & Tauch, A. (2012). Draft Genome Sequence of Turicella otitidis ATCC 51513, Isolated from Middle Ear Fluid from a Child with Otitis Media. Journal of Bacteriology, 194(21), 5968-5969. American Society for Microbiology. doi:10.1128/JB.01412-12.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2518300Schröder, J., Glaub, A., Schneider, J., Trost, E. & Tauch, A. (2012). Draft genome sequence of Corynebacterium bovis DSM 20582, which causes clinical mastitis in dairy cows. Journal of Bacteriology, 194(16), 4437-4437. American Society for Microbiology. doi:10.1128/JB.00839-12.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2523617Lobo, F.P., Rodrigues, M.R., Rodrigues, G.O.L., Hilario, H.O., Souza, R.A., Tauch, A., Miyoshi, A., Franco, G.C., Azevedo, V. & Franco, G.R. (2012). KOMODO: a web tool for detecting and visualizing biased distribution of groups of homologous genes in monophyletic taxa. Nucleic Acids Research, 40(W1), W491-W497. Oxford University Press (OUP). doi:10.1093/nar/gks490.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513207Barreiro, C., Prieto, C., Sola-Landa, A., Solera, E., Martinez-Castro, M., Perez-Redondo, R., Garcia-Estrada, C., Aparicio, J.F., Fernandez-Martinez, L.T., Santos-Aberturas, J., Salehi-Najafabadi, Z., Rodriguez-Garcia, A., Tauch, A. & Martin, J.F. (2012). Draft Genome of Streptomyces tsukubaensis NRRL 18488, the Producer of the Clinically Important Immunosuppressant Tacrolimus (FK506). Journal of bacteriology, 194(14), 3756-3757. American Society for Microbiology. doi:10.1128/JB.00692-12.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513297Pauling, J., Rottger, R., Neuner, A., Salgado, H., Collado-Vides, J., Kalaghatgi, P., Azevedo, V., Tauch, A., Pühler, A. & Baumbach, J. (2012). On the trail of EHEC/EAEC-unraveling the gene regulatory networks of human pathogenic Escherichia coli bacteria. Integrative Biology, 4(7), 728-733. Royal Society of Chemistry (RSC). doi:10.1039/c2ib00132b.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289971Ruiz, J.C., D'Afonseca, V., Silva, A., Ali, A., Pinto, A.C., Santos, A.R., Rocha, A.A.M.C., Lopes, D.O., Dorella, F.A., Pacheco, L.G.C., Costa, M.P., Turk, M.Z., Seyffert, N., Moraes, P.M.R.O., Soares, S.C., Almeida, S.S., Castro, T.L.P., Abreu, V.A.C., Trost, E., Baumbach, J., Tauch, A., Schneider, M.P.C., McCulloch, J., Cerdeira, L.T., Ramos, R.T.J., Zerlotini, A., Dominitini, A., Resende, D.M., Coser, E.M., Oliveira, L.M., Pedrosa, A.L., Vieira, C.U., Guimaraes, C.T., Bartholomeu, D.C., Oliveira, D.M., Santos, F.R., Rabelo, E.M., Lobo, F.P., Franco, G.R., Costa, A.F., Castro, I.M., Costa Dias, S.R., Ferro, J.A., Ortega, J.M., Paiva, L.V., Goulart, L.R., Almeida, J.F., Ferro, M.I.T., Carneiro, N.P., Falcao, P.R.K., Grynberg, P., Teixeira, S.M.R., Brommonschenkel, S., Oliveira, S.C., Meyer, R., Moore, R.J., Miyoshi, A., Oliveira, G.C. & Azevedo, V. (2011). Evidence for Reductive Genome Evolution and Lateral Acquisition of Virulence Functions in Two Corynebacterium pseudotuberculosis Strains. PLoS ONE, 6(4): e18551. Public Library of Science (PLoS). doi:10.1371/journal.pone.0018551.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2442587Schröder, J., Maus, I., Trost, E. & Tauch, A. (2011). Complete genome sequence of Corynebacterium variabile DSM 44702 isolated from the surface of smear-ripened cheeses and insights into cheese ripening and flavor generation. BMC Genomics, 12(1): 545. Springer Science + Business Media. doi:10.1186/1471-2164-12-545.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354752Trost, E., Al-Dilaimi, A., Papavasiliou, P., Schneider, J., Viehöver, P., Burkovski, A., Soares, S.C., Almeida, S.S., Dorella, F.A., Miyoshi, A., Azevedo, V., Schneider, M.P., Silva, A., Santos, C.S., Santos, L.S., Sabbadini, P., Dias, A.A., Hirata, R.J., Mattos-Guaraldi, A.L. & Tauch, A. (2011). Comparative analysis of two complete Corynebacterium ulcerans genomes and detection of candidate virulence factors. BMC Genomics, 12(1): 383. Springer Science + Business Media. doi:10.1186/1471-2164-12-383.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375552Chaparro, P.J.P., McCulloch, J.A., Cerdeira, L.T., Al-Dilaimi, A., de Sa, L.L.C., Oliveira de, R., Tauch, A., Carvalho Azevedo de, V.A., Schneider, M.P.C. & Costa da Silva da, A.L. (2011). Whole genome sequencing of environmental Vibrio cholerae O1 from 10 nanograms of DNA using short reads. Journal of Microbiological Methods, 87(2), 208-212. Elsevier BV. doi:10.1016/j.mimet.2011.08.003.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2473990Brune, I., Götker, S., Schneider, J., Rodionov, D.A. & Tauch, A. (2011). Negative transcriptional control of biotin metabolism genes by the TetR-type regulator BioQ in biotin-auxotrophic Corynebacterium glutamicum ATCC 13032. Journal of Biotechnology, 159(3), 225-234. Elsevier BV. doi:10.1016/j.jbiotec.2011.12.001.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375645Barzantny, H., Brune, I. & Tauch, A. (2011). Molecular basis of human body odour formation: insights deduced from corynebacterial genome sequences. International Journal of Cosmetic Science, 34(1), 2-11. Wiley-Blackwell. doi:10.1111/j.1468-2494.2011.00669.x.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396576Becker, J., Hackel, M., Jakobi, T., Rupp, O., Schneider, J., Szczepanowski, R., Bekel, T., Borth, N., Goesmann, A., Grillari, J., Kaltschmidt, C., Noll, T., Pühler, A., Tauch, A. & Brinkrolf, K. (2011). Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Journal of Biotechnology, 156(3), 227-235. Elsevier BV. doi:10.1016/j.jbiotec.2011.09.014.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445Schneider, J., Blom, J., Jaenicke, S., Linke, B., Brinkrolf, K., Neuweger, H., Tauch, A. & Goesmann, A. (2011). RAPYD - Rapid Annotation Platform for Yeast Data. Journal of Biotechnology, 155(1), 118-126. Elsevier BV. doi:10.1016/j.jbiotec.2010.10.076.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326568Cerdeira, L.T., Carneiro, A.R., Juca Ramos, R.T., de Almeida, S.S., D'Afonseca, V., Cruz Schneider, M.P., Baumbach, J., Tauch, A., McCulloch, J.A., Carvalho Azevedo, V.A. & Silva, A. (2011). Rapid hybrid de novo assembly of a microbial genome using only short reads: Corynebacterium pseudotuberculosis I19 as a case study. Journal of Microbiological Methods, 86(2), 218-223. Elsevier BV. doi:10.1016/j.mimet.2011.05.008.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2454721Cerdeira, L.T., Cruz Schneider, M.P., Pinto, A.C., de Almeida, S.S., dos Santos, A.R., Vieira Barbosa, E.G., Ali, A., Aburjaile, F.F., Carvalho de Abreu, V.A., Guimaraes, L.C., Soares, S. de C., Dorella, F.A., Rocha, F.S., Bol, E., Caracciolo Gomes de Sa, P.H., Lopes, T.S., Barbosa, M.S., Carneiro, A.R., Juca Ramos, R.T., da Rocha Coimbra, N.A., Jeronimo Lima, A.R., Barh, D., Jain, N., Tiwari, S., Raja, R., Zambare, V., Ghosh, P., Trost, E., Tauch, A., Miyoshi, A., Azevedo, V. & Silva, A. (2011). Complete Genome Sequence of Corynebacterium pseudotuberculosis Strain CIP 52.97, Isolated from a Horse in Kenya. Journal of Bacteriology, 193(24), 7025-7026. American Society for Microbiology. doi:10.1128/JB.06293-11.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2411181Cerdeira, L.T., Pinto, A.C., Schneider, M.P.C., de Almeida, S.S., Dos Santos, A.R., Barbosa, E.G.V., Ali, A., Barbosa, M.S., Carneiro, A.R., Ramos, R.T.J., de Oliveira, R.S., Barh, D., Barve, N., Zambare, V., Belchior, S.E., Guimaraes, L.C., de Castro Soares, S., Dorella, F.A., Rocha, F.S., de Abreu, V.A.C., Tauch, A., Trost, E., Miyoshi, A., Azevedo, V. & Silva, A. (2011). Whole-Genome Sequence of Corynebacterium pseudotuberculosis PAT10 Strain Isolated from Sheep in Patagonia, Argentina. Journal of Bacteriology, 193(22), 6420-6421. American Society for Microbiology. doi:10.1128/JB.06044-11.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1968054Silva, A., Schneider, M.P.C., Cerdeira, L., Barbosa, M.S., Ramos, R.T.J., Carneiro, A.R., Santos, R., Lima, M., D'Afonseca, V., Almeida, S.S., Santos, A.R., Soares, S.C., Pinto, A.C., Ali, A., Dorella, F.A., Rocha, F., Carvalho de Abreu, V.A., Trost, E., Tauch, A., Shpigel, N., Miyoshi, A. & Azevedo, V. (2011). Complete Genome Sequence of Corynebacterium pseudotuberculosis I19, a Strain Isolated from a Cow in Israel with Bovine Mastitis. Journal of Bacteriology, 193(1), 323-324. American Society for Microbiology. doi:10.1128/JB.01211-10.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003316Jochmann, N., Götker, S. & Tauch, A. (2011). Positive transcriptional control of the pyridoxal phosphate biosynthesis genes pdxST by the MocR-type regulator PdxR of Corynebacterium glutamicum ATCC 13032. Microbiology, 157(1), 77-88. Society for General Microbiology. doi:10.1099/mic.0.044818-0.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003180Brune, I., Barzantny, H., Kloetzel, M., Jones, J., James, G. & Tauch, A. (2011). Identification of McbR as transcription regulator of aecD and genes involved in methionine and cysteine biosynthesis in Corynebacterium jeikeium K411. Journal of Biotechnology, 151(1), 22-29. Elsevier BV. doi:10.1016/j.jbiotec.2010.11.005.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1966439Trost, E., Ott, L., Schneider, J., Schröder, J., Jaenicke, S., Goesmann, A., Husemann, P., Stoye, J., Alves Dorella, F., Souza Rocha, F., de Castro Soares, S., D'Afonseca, V., Miyoshi, A., Ruiz, J., Silva, A., Azevedo, V., Burkovski, A., Guiso, N., Join-Lambert, O.F., Kayal, S. & Tauch, A. (2010). The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence. BMC Genomics, 11(1): 728. Springer Science + Business Media. doi:10.1186/1471-2164-11-728.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929692Schneider, J., Vorhölter, F.-J., Trost, E., Blom, J., Musa, Y.R., Neuweger, H., Niehaus, K., Schatschneider, S., Tauch, A. & Goesmann, A. (2010). CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks. Genetics and Molecular Research, 9(3), 1660-1672. Genetics and Molecular Research. doi:10.4238/vol9-3gmr901.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785275Trost, E., Götker, S., Schneider, J., Schneiker-Bekel, S., Szczepanowski, R., Tilker, A., Viehöver, P., Arnold, W., Bekel, T., Blom, J., Gartemann, K.-H., Linke, B., Goesmann, A., Pühler, A., Shukla, S.K. & Tauch, A. (2010). Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion. BMC Genomics, 11(1): 91. Springer Science + Business Media. doi:10.1186/1471-2164-11-91.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1794411Schröder, J. & Tauch, A. (2010). Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network. FEMS Microbiology Reviews, 34(5), 685-737. Oxford University Press (OUP). doi:10.1111/j.1574-6976.2010.00228.x.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785251Schröder, J., Jochmann, N., Rodionov, D.A. & Tauch, A. (2010). The Zur regulon of Corynebacterium glutamicum ATCC 13032. BMC Genomics, 11(1): 12. Springer Science + Business Media. doi:10.1186/1471-2164-11-12.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796468Sterthoff, C., Lang, A.E., Schwan, C., Tauch, A. & Aktories, K. (2010). Functional Characterization of an Extended Binding Component of the Actin-ADP-Ribosylating C2 Toxin Detected in Clostridium botulinum Strain (C) 2300. INFECTION AND IMMUNITY, 78(4), 1468-1474. American Society for Microbiology. doi:10.1128/IAI.01351-09.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783240Baumbach, J., Rahmann, S. & Tauch, A. (2009). Reliable transfer of transcriptional gene regulatory networks between taxonomically related organisms. BMC Systems Biology, 3(1), 8. Springer Science + Business Media. doi:10.1186/1752-0509-3-8.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635951Nentwich, S.S., Brinkrolf, K., Gaigalat, L., Hueser, A.T., Rey, D.A., Mohrbach, T., Marin, K., Pühler, A., Tauch, A. & Kalinowski, J. (2009). Characterization of the Lacl-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032. MICROBIOLOGY, 155(1), 150-164. Society for General Microbiology. doi:10.1099/mic.0.020388-0.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929146Baumbach, J., Wittkop, T., Kleindt, C.K. & Tauch, A. (2009). Integrated analysis and reconstruction of microbial transcriptional gene regulatory networks using CoryneRegNet. Nature Protocols, 4(6), 992-1005. Nature Publishing Group. doi:10.1038/nprot.2009.81.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092120Lobo, F.P., Mota, B.E.F., Pena, S.D.J., Azevedo, V., Macedo, A.M., Tauch, A., Machado, C.R. & Franco, G.R. (2009). Virus-host coevolution: common patterns of nucleotide motif usage in Flaviviridae and their hosts. PLoS One, 4(7), e6282. Public Library of Science (PLoS). doi:10.1371/journal.pone.0006282.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635321Dondrup, M., Albaum, S., Griebel, T., Henckel, K., Jünemann, S., Kahlke, T., Kleindt, C.K., Kuester, H., Linke, B., Mertens, D., Mittard-Runte, V., Neuweger, H., Runte, K.J., Tauch, A., Tille, F., Pühler, A. & Goesmann, A. (2009). EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data. BMC Bioinformatics, 10(1): 50. Springer Science + Business Media. doi:10.1186/1471-2105-10-50.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589932Kohl, T. & Tauch, A. (2009). The GlxR regulon of the amino acid producer Corynebacterium glutamicum: Detection of the corynebacterial core regulon and integration into the transcriptional regulatory network model. JOURNAL OF BIOTECHNOLOGY, 143(4), 239-246. Elsevier BV. doi:10.1016/j.jbiotec.2009.08.005.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1633812Jochmann, N., Kurze, A.-K., Czaja, L.F., Brinkrolf, K., Brune, I., Hueser, A.T., Hansmeier, N., Pühler, A., Borovok, I. & Tauch, A. (2009). Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays. MICROBIOLOGY, 155(5), 1459-1477. Society for General Microbiology. doi:10.1099/mic.0.025841-0.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635928Baumbach, J., Tauch, A. & Rahmann, S. (2009). Towards the integrated analysis, visualization and reconstruction of microbial gene regulatory networks. BRIEFINGS IN BIOINFORMATICS, 10(1), 75-83. Oxford University Press (OUP). doi:10.1093/bib/bbn055.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592024Vorhölter, F.-J., Schneiker-Bekel, S., Goesmann, A., Krause, L., Bekel, T., Kaiser, O., Linke, B., Patschkowski, T., Rückert, C., Schmid, J., Sidhu, V.K., Sieber, V., Tauch, A., Watt, S.A., Weisshaar, B., Becker, A., Niehaus, K. & Pühler, A. (2008). The genome of Xanthomonas campestris pv. campestris B 100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis. Journal of Biotechnology, 134(1-2), 33-45. ELSEVIER SCIENCE BV. doi:10.1016/j.jbiotec.2007.12.013.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588078Brinkrolf, K., Ploeger, S., Solle, S., Brune, I., Nentwich, S.S., Hueser, A.T., Kalinowski, J., Pühler, A. & Tauch, A. (2008). The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences. MICROBIOLOGY, 154(4), 1068-1081. SOC GENERAL MICROBIOLOGY. doi:10.1099/mic.0.2007/014001-0.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592210Jungwirth, B., Emer, D., Brune, I., Hansmeier, N., Pühler, A., Eikmanns, B.J. & Tauch, A. (2008). Triple transcriptional control of the resuscitation promoting factor 2 (rpf2) gene of Corynebacterium glutamicum by the regulators of acetate metabolism RamA and RamB and the cAMP-dependent regulator GlxR. FEMS MICROBIOLOGY LETTERS, 281(2), 190-197. BLACKWELL PUBLISHING. doi:10.1111/j.1574-6968.2008.01098.x.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586009Krause, L., Diaz, N.N., Edwards, R.A., Gartemann, K.-H., Krömeke, H., Neuweger, H., Pühler, A., Runte, K.J., Schlüter, A., Stoye, J., Szczepanowski, R., Tauch, A. & Goesmann, A. (2008). Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor. JOURNAL OF BIOTECHNOLOGY, 136(1-2), 91-101. ELSEVIER SCIENCE BV. doi:10.1016/j.jbiotec.2008.06.003.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586719Kohl, T., Baumbach, J., Jungwirth, B., Pühler, A. & Tauch, A. (2008). The GlxR regulon of the amino acid producer Corynebacterium glutamicum: In silico and in vitro detection of DNA binding sites of a global transcription regulator. JOURNAL OF BIOTECHNOLOGY, 135(4), 340-350. ELSEVIER SCIENCE BV. doi:10.1016/j.jbiotec.2008.05.011.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587508Soriano, F. & Tauch, A. (2008). Microbiological and clinical features of Corynebacterium urealyticum: urinary tract stones and genomics as the Rosetta Stone. CLINICAL MICROBIOLOGY AND INFECTION, 14(7), 632-643. BLACKWELL PUBLISHING. doi:10.1111/j.1469-0691.2008.02023.x.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585987Schlüter, A., Bekel, T., Diaz, N.N., Dondrup, M., Eichenlaub, R., Gartemann, K.-H., Krahn, I., Krause, L., Kroemeke, H., Kruse, O., Mussgnug, J.H., Neuweger, H., Niehaus, K., Pühler, A., Runte, K.J., Szczepanowski, R., Tauch, A., Tilker, A., Viehöver, P. & Goesmann, A. (2008). The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology. Journal of Biotechnology, 136(1-2), 77-90. Elsevier. doi:10.1016/j.jbiotec.2008.05.008.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585918Tauch, A., Trost, E., Tilker, A., Ludewig, U., Schneiker-Bekel, S., Goesmann, A., Arnold, W., Bekel, T., Brinkrolf, K., Brune, I., Goetker, S., Kalinowski, J., Kamp, P.-B., Lobo, F.P., Viehöver, P., Weisshaar, B., Soriano, F., Droege, M. & Pühler, A. (2008). The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing. Journal of Biotechnology, 136(1-2), 11-21. ELSEVIER SCIENCE BV. doi:10.1016/j.jbiotec.2008.02.009.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586785Oehm, S., Gilbert, D., Tauch, A., Stoye, J. & Goesmann, A. (2008). Comparative Pathway Analyzer - a web server for comparative analysis, clustering and visualization of metabolic networks in multiple organisms. NUCLEIC ACIDS RESEARCH, 36(Web Server), W433-W437. OXFORD UNIV PRESS. doi:10.1093/nar/gkn284.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585939Tauch, A., Schneider, J., Szczepanowski, R., Tilker, A., Viehöver, P., Gartemann, K.-H., Arnold, W., Blom, J., Brinkrolf, K., Brune, I., Goetker, S., Weisshaar, B., Goesmann, A., Droege, M. & Pühler, A. (2008). Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids. Journal of Biotechnology, 136(1-2), 22-30. ELSEVIER SCIENCE BV. doi:10.1016/j.jbiotec.2008.03.004.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1631701Swe, P.M., Heng, N.C.K., Ting, Y.-T., Baird, H.J., Carne, A., Tauch, A., Tagg, J.R. & Jack, R.W. (2007). ef1097 and ypkK encode enterococcin V583 and corynicin JK, members of a new family of antimicrobial proteins (bacteriocins) with modular structure from Gram-positive bacteria. Microbiology, 153(10), 3218-3227. SOC GENERAL MICROBIOLOGY. doi:10.1099/mic.0.2007/010777-0.
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2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1594020Baumbach, J., Wittkop, T., Rademacher, K., Rahmann, S., Brinkrolf, K. & Tauch, A. (2007). CoryneRegNet 3.0 - An interactive systems biology platform for the analysis of gene regulatory networks in corynebacteria and Escherichia coli (JOURNAL OF BIOTECHNOLOGY). Journal of Biotechnology (S. 279-289). ELSEVIER SCIENCE BV. doi:10.1016/j.jbiotec.2006.12.012.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1594426Hansmeier, N., Chao, T.-C., Daschkey, S., Muesken, M., Kalinowski, J., Pühler, A. & Tauch, A. (2007). A comprehensive proteome map of the lipid-requiring nosocomial pathogen Corynebacterium jeikeium K411. PROTEOMICS, 7(7), 1076-1096. WILEY-V C H VERLAG GMBH. doi:10.1002/pmic.200600833.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596102Larisch, C., Nakunst, D., Hueser, A.T., Tauch, A. & Kalinowski, J. (2007). The alternative sigma factor SigB of Corynebacterium glutamicum modulates global gene expression during transition from exponential growth to stationary phase. BMC Genomics, 8(1): 4. BIOMED CENTRAL LTD. doi:10.1186/1471-2164-8-4.
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2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1594000Brinkrolf, K., Brune, I. & Tauch, A. (2007). The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum (JOURNAL OF BIOTECHNOLOGY). Journal of Biotechnology (S. 191-211). ELSEVIER SCIENCE BV. doi:10.1016/j.jbiotec.2006.12.013.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593371Nakunst, D., Larisch, C., Hueser, A.T., Tauch, A., Pühler, A. & Kalinowski, J. (2007). The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes. JOURNAL OF BACTERIOLOGY, 189(13), 4696-4707. AMER SOC MICROBIOLOGY. doi:10.1128/JB.00382-07.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783727Gaigalat, L., Schlüter, J.-P., Hartmann, M., Mormann, S., Tauch, A., Pühler, A. & Kalinowski, J. (2007). The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate: sugar phosphotransferase system (PTS) in Corynebacterium glutamicum. BMC Molecular Biology, 8(1): 104. Springer Science and Business Media LLC. doi:10.1186/1471-2199-8-104.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1632131Ventura, M., Canchaya, C., Tauch, A., Chandra, G., Fitzgerald, G.F., Chater, K.F. & van Sinderen, D. (2007). Genomics of Actinobacteria: Tracing the evolutionary history of an ancient phylura. Microbiol Mol Biol Rev, 71(3), 495-548. AMER SOC MICROBIOLOGY. doi:10.1128/MMBR.00005-07.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2499499Baumbach, J., Brinkrolf, K., Wittkop, T., Tauch, A. & Rahmann, S. (2006). CoryneRegNet 2: An integrative bioinformatics approach for reconstruction and comparison of transcriptional regulatory networks in prokaryotes. Journal of Integrative Bioinformatics, 3(2), 24. Walter De Gruyter Gmbh. doi:10.2390/biecoll-jib-2006-24.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946381Brune, I., Becker, A., Paarmann, D., Albersmeier, A., Kalinowski, J., Pühler, A. & Tauch, A. (2006). Under the influence of the active deodorant ingredient 4-hydroxy-3-methoxybenzyl alcohol, the skin bacterium Corynebacterium jeikeium moderately responds with differential gene expression. J Biotechnol, 127(1), 21-33. Elsevier BV. doi:10.1016/j.jbiotec.2006.06.011.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773628Brune, I., Werner, H., Hüser, A.T., Kalinowski, J., Pühler, A. & Tauch, A. (2006). The DtxR protein acting as dual transcriptional regulator directs a global regulatory network involved in iron metabolism of Corynebacterium glutamicum. BMC Genomics, 7(1): 21. Springer Science and Business Media LLC. doi:10.1186/1471-2164-7-21.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597707Oikawa, T., Tauch, A., Schaffer, S. & Fujioka, T. (2006). Expression of alr gene from Corynebacterium glutamicum ATCC 13032 in Escherichia coli and molecular characterization of the recombinant alanine racemase. JOURNAL OF BIOTECHNOLOGY, 125(4), 503-512. ELSEVIER SCIENCE BV. doi:10.1016/j.jbiotec.2006.04.002.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599402Hansmeier, N., Chao, T.C., Kalinowski, J., Pühler, A. & Tauch, A. (2006). Mapping and comprehensive analysis of the extracellular and cell surface proteome of the human pathogen Corynebacterium diphtheriae. PROTEOMICS, 6(8), 2465-2476. WILEY-V C H VERLAG GMBH. doi:10.1002/pmic.200500360.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599618Hansmeier, N., Albersmeier, A., Tauch, A., Damberg, T., Ros, R., Anselmetti, D., Pühler, A. & Kalinowski, J. (2006). The surface (S)-layer gene cspB of Corynebacterium glutamicum is transcriptionally activated by a LuxR-type regulator and located on a 6 kb genomic island absent from the type strain ATCC 13032. Microbiology, 152(4), 923-935. SOC GENERAL MICROBIOLOGY. doi:10.1099/mic.0.28673-0.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600852Hansmeier, N., Chao, T.C., Pühler, A., Tauch, A. & Kalinowski, J. (2006). The cytosolic, cell surface and extracellular proteomes of the biotechnologically important soil bacterium Cornyebacterium efficiens YS-314 in comparison to those of Corynebacterium glutamicum ATCC 13032. PROTEOMICS, 6(1), 233-250. WILEY-V C H VERLAG GMBH. doi:10.1002/pmic.200500144.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773632Baumbach, J., Brinkrolf, K., Czaja, L.F., Rahmann, S. & Tauch, A. (2006). CoryneRegNet: An ontology-based data warehouse of corynebacterial transcription factors and regulatory networks. BMC Genomics, 7(1): 24. Springer Science and Business Media LLC. doi:10.1186/1471-2164-7-24.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773853Mormann, S., Lömker, A., Rückert, C., Gaigalat, L., Tauch, A., Pühler, A. & Kalinowski, J. (2006). Random mutagenesis in Corynebacterium glutamicum ATCC 13032 using an IS6100-based transposon vector identified the last unknown gene in the histidine biosynthesis pathway. BMC Genomics, 7(1): 205. Springer Science and Business Media LLC. doi:10.1186/1471-2164-7-205.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599211Mahne, M., Tauch, A., Pühler, A. & Kalinowski, J. (2006). The Corynebacterium glutamicum gene pmt encoding a glycosyltransferase related to eukaryotic protein-O-mannosyltransferases is essential for glycosylation of the resuscitation promoting factor (Rpf2) and other secreted proteins. FEMS MICROBIOLOGY LETTERS, 259(2), 226-233. BLACKWELL PUBLISHING. doi:10.1111/j.1574-6968.2006.00269.x.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596705Brinkrolf, K., Brune, I. & Tauch, A. (2006). Transcriptional regulation of catabolic pathways for aromatic compounds in Corynebacterium glutamicum. GENETICS AND MOLECULAR RESEARCH, 5(4), 773-789. FUNPEC-EDITORA.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603458Hüser, A.T., Chassagnole, C., Lindley, N.D., Merkamm, M., Guyonvarch, A., Elisakova, V., Patek, M., Kalinowski, J., Brune, I., Pühler, A. & Tauch, A. (2005). Rational design of a Corynebacterium glutamicum pantothenate production strain and its characterization by metabolic flux analysis and genorne-wide transcriptional profiling. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 71(6), 3255-3268. AMER SOC MICROBIOLOGY. doi:10.1128/AEM.71.6.3255-3268.2005.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603821Rey, D.A., Nentwich, S.S., Koch, D.J., Rückert, C., Pühler, A., Tauch, A. & Kalinowski, J. (2005). The McbR repressor modulated by the effector substance S-adenosylhomocysteine controls directly the transcription of a regulon involved in sulphur metabolism of Corynebacterium glutamicum ATCC 13032. MOLECULAR MICROBIOLOGY, 56(4), 871-887. BLACKWELL PUBLISHING LTD. doi:10.1111/j.1365-2958.2005.04586.x.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605160Barreiro, C., Gonzalez-Lavado, E., Brand, S., Tauch, A. & Martin, J.F. (2005). Heat shock Proteome analysis of wild-type Corynebacterium glutamicum ATCC 13032 and a spontaneous mutant lacking GroEL1, a dispensable chaperone. JOURNAL OF BACTERIOLOGY, 187(3), 884-889. AMER SOC MICROBIOLOGY. doi:10.1128/JB.187.3.884-889.2005.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602137Koch, D.J., Rückert, C., Albersmeier, A., Hüser, A.T., Tauch, A., Pühler, A. & Kalinowski, J. (2005). The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate. Mol Microbiol, 58(2), 480-494. BLACKWELL PUBLISHING. doi:10.1111/j.1365-2958.2005.04836.x.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603317Tauch, A., Kaiser, O., Hain, T., Goesmann, A., Weisshaar, B., Albersmeier, A., Bekel, T., Bischoff, N., Brune, I., Chakraborty, T., Kalinowski, J., Meyer, F., Rupp, O., Schneiker-Bekel, S., Viehöver, P. & Pühler, A. (2005). Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora. Journal of Bacteriology, 187(13), 4671-4682. AMER SOC MICROBIOLOGY. doi:10.1128/JB.187.13.4671-4682.2005.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773606Brune, I., Brinkrolf, K., Kalinowski, J., Pühler, A. & Tauch, A. (2005). The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences. BMC Genomics, 6(1): 86. Springer Science and Business Media LLC. doi:10.1186/1471-2164-6-86.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606500Tauch, A., Bischoff, N., Pühler, A. & Kalinowski, J. (2004). Comparative genomics identified two conserved DNA modules in a corynebacterial plasmid family present in clinical isolates of the opportunistic human pathogen Corynebacterium jeikeium. PLASMID, 52(2), 102-118. ACADEMIC PRESS INC ELSEVIER SCIENCE. doi:10.1016/j.plasmid.2004.05.003.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773130Hansmeier, N., Bartels, F.W., Ros, R., Anselmetti, D., Tauch, A., Pühler, A. & Kalinowski, J. (2004). Classification of hyper-variable Corynebacterium glutamicum surface-layer proteins by sequence analyses and atomic force microscopy. J Biotechnol, 112(1-2), 177-193. Elsevier BV. doi:10.1016/j.jbiotec.2004.03.020.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612397Tauch, A., Bischoff, N., Brune, I. & Kalinowski, J. (2003). Insights into the genetic organization of the Corynebacterium diphtheriae erythromycin resistance plasmid pNG2 deduced from its complete nucleotide sequence. PLASMID, 49(1), 63-74. ACADEMIC PRESS INC ELSEVIER SCIENCE. doi:10.1016/S0147-619X(02)00115-4.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610260Hartmann, M., Tauch, A., Eggeling, L., Bathe, B., Mockel, B., Pühler, A. & Kalinowski, J. (2003). Identification and characterization of the last two unknown genes, dapC and dapF, in the succinylase branch of the L-lysine biosynthesis of Corynebacterium glutamicum. J Biotechnol, 104(1-3), 199-211. ELSEVIER SCIENCE BV. doi:10.1016/S0168-1656(03)00156-1.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610274McHardy, A.C., Tauch, A., Rückert, C., Pühler, A. & Kalinowski, J. (2003). Genome-based analysis of biosynthetic aminotransferase genes of Corynebacterium glutamicum. J Biotechnol, 104(1-3), 229-240. ELSEVIER SCIENCE BV. doi:10.1016/S0168-1656(03)00161-5.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610281Kirchner, O. & Tauch, A. (2003). Tools for genetic engineering in the amino acid-producing bacterium Corynebacterium glutamicum. JOURNAL OF BIOTECHNOLOGY, 104(1-3), 287-299. ELSEVIER SCIENCE BV. doi:10.1016/S0168-1656(03)00148-2.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612324Tauch, A., Schlüter, A., Bischoff, N., Goesmann, A., Meyer, F. & Pühler, A. (2003). The 79,370-bp conjugative plasmid pB4 consists of an IncP-1 beta backbone loaded with a chromate resistance transposon, the strA-strB streptomycin resistance gene pair, the oxacillinase gene bla(NPS-1), and a tripartite antibiotic efflux system of the resistance-nodulation-division family. Molecular Genetics and Genomics, 268(5), 570-584. SPRINGER-VERLAG. doi:10.1007/s00438-002-0785-z.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610254Tauch, A., Pühler, A., Kalinowski, J. & Thierbach, G. (2003). Plasmids in Corynebacterium glutamicum and their molecular classification by comparative genomics. JOURNAL OF BIOTECHNOLOGY, 104(1-3), 27-40. ELSEVIER SCIENCE BV. doi:10.1016/S0168-1656(03)00157-3.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609339Hüser, A.T., Becker, A., Brune, I., Dondrup, M., Kalinowski, J., Plassmeier, J., Pühler, A., Wiegräbe, I. & Tauch, A. (2003). Development of a Corynebacterium glutamicum DNA microarray and validation by genome-wide expression profiling during growth with propionate as carbon source. JOURNAL OF BIOTECHNOLOGY, 106(2-3), 269-286. ELSEVIER SCIENCE BV. doi:10.1016/j.jbiotec.2003.08.006.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1895035Kalinowski, J., Bathe, B., Bartels, D., Bischoff, N., Bott, M., Burkovski, A., Dusch, N., Eggeling, L., Eikmanns, B.J., Gaigalat, L., Goesmann, A., Hartmann, M., Huthmacher, K., Kramer, R., Linke, B., McHardy, A.C., Meyer, F., Mockel, B., Pfefferle, W., Pühler, A., Rey, D.A., Rückert, C., Rupp, O., Sahm, H., Wendisch, V.F., Wiegrabe, I. & Tauch, A. (2003). The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins. Journal of Biotechnology, 104(1-3), 5-25. Elsevier BV. doi:10.1016/S0168-1656(03)00154-8.
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613421Tauch, A., Götker, S., Pühler, A., Kalinowski, J. & Thierbach, G. (2002). The 27.8-kb R-plasmid pTET3 from Corynebacterium glutamicum encodes the aminoglycoside adenyltransferase gene cassette aadA9 and the regulated tetracycline efflux system Tet 33 flanked by active copies of the widespread insertion sequence IS6100. Plasmid, 48(2), 117-129. ACADEMIC PRESS INC ELSEVIER SCIENCE. doi:10.1016/S0147-619X(02)00120-8.
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613598Tauch, A., Kirchner, O., Löffler, B., Götker, S., Pühler, A. & Kalinowski, J. (2002). Efficient electrotransformation of Corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1. CURRENT MICROBIOLOGY, 45(5), 362-367. SPRINGER-VERLAG. doi:10.1007/s00284-002-3728-3.
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613526Tauch, A., Götker, S., Pühler, A., Kalinowski, J. & Thierbach, G. (2002). The alanine racemase gene alr is an alternative to antibiotic resistance genes in cloning systems for industrial Corynebacterium glutamicum strains. JOURNAL OF BIOTECHNOLOGY, 99(1), 79-91. ELSEVIER SCIENCE BV. doi:10.1016/S0168-1656(02)00159-1.
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1614276Tauch, A., Schneiker-Bekel, S., Selbitschka, W., Pühler, A., van Overbeek, L.S., Smalla, K., Thomas, C.M., Bailey, M.J., Forney, L.J., Weightman, A., Ceglowski, P., Pembroke, T., Tietze, E., Schroder, G., Lanka, E. & van Elsas, J.D. (2002). The complete nucleotide sequence and environmental distribution of the cryptic, conjugative, broad-host-range plasmid pIPO2 isolated from bacteria of the wheat rhizosphere. MICROBIOLOGY-SGM, 148 (Pt 6), 1637-1653. SOC GENERAL MICROBIOLOGY. doi:10.1099/00221287-148-6-1637.
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1614833Tauch, A., Homann, I., Mormann, S., Rüberg, S., Billault, A., Bathe, B., Brand, S., Brockmann-Gretza, O., Rückert, C., Schischka, N., Wrenger, C., Hoheisel, J., Mockel, B., Huthmacher, K., Pfefferle, W., Pühler, A. & Kalinowski, M. (2002). Strategy to sequence the genome of Corynebacterium glutamicum ATCC 13032: use of a cosmid and a bacterial artificial chromosome library. JOURNAL OF BIOTECHNOLOGY, 95(1), 25-38. ELSEVIER SCIENCE BV. doi:10.1016/S0168-1656(01)00443-6.
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1617736Wehmeier, L., Brockmann-Gretza, O., Pisabarro, A., Tauch, A., Pühler, A., Martin, J.F. & Kalinowski, J. (2001). A Corynebacterium glutamicum mutant with a defined deletion within the rpIK gene is impaired in (p)ppGpp accumulation upon amino acid starvation. Microbiology, 147, 691-700. SOC GENERAL MICROBIOLOGY. doi:0.1099/00221287-147-3-691.
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1620384Tauch, A., Krieft, S., Kalinowski, J. & Pühler, A. (2000). The 51,409-bp R-plasmid pTP10 from the multiresistant clinical isolate Corynebacterium striatum M82B is composed of DNA segments initially identified in soil bacteria and in plant, animal, and human pathogens. MOLECULAR AND GENERAL GENETICS, 263(1), 1-11. SPRINGER VERLAG. doi:10.1007/PL00008668.
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1618501Tauch, A., Pühler, A., Kalinowski, J. & Thierbach, G. (2000). TetZ, a new tetracycline resistance determinant discovered in gram-positive bacteria, shows high homology to gram-negative regulated efflux systems. PLASMID, 44(3), 285-291. ACADEMIC PRESS INC. doi:10.1006/plas.2000.1489.
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1623329Tauch, A., Krieft, S., Pühler, A. & Kalinowski, J. (1999). The tetAB genes of the Corynebacterium striatum R-plasmid pTP10 encode an ABC transporter and confer tetracycline, oxytetracycline and oxacillin resistance in Corynebacterium glutamicum. FEMS Microbiol Lett, 173(1), 203-209. ELSEVIER SCIENCE BV. doi:10.1111/j.1574-6968.1999.tb13503.x.
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1624721Tauch, A., Zheng, Z.X., Pühler, A. & Kalinowski, J. (1998). Corynebacterium striatum chloramphenicol resistance transposon Tn5564: Genetic organization and transposition in Corynebacterium glutamicum. Plasmid, 40(2), 126-139. ACADEMIC PRESS INC. doi:10.1006/plas.1998.1362.
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1626635Schäfer, A., Tauch, A., Droste, N., Pühler, A. & Kalinowski, J. (1997). The Corynebacterium glutamicum cglIM gene encoding a 5-cytosine methyltransferase enzyme confers a specific DNA methylation pattern in an McrBC-deficient Escherichia coli strain. Gene, 203(2), 95-101. ELSEVIER SCIENCE BV. doi:10.1016/S0378-1119(97)00519-2.
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1640693Tauch, A., Kassing, F., Kalinowski, J. & Pühler, A. (1995). The erythromycin resistance gene of the Corynebacterium xerosis R-plasmid pTP10 also carrying chloramphenicol, kanamycin, and tetracycline resistances is capable of transposition in Corynebacterium glutamicum. PLASMID, 33(3), 168-179. ACADEMIC PRESS INC JNL-COMP SUBSCRIPTIONS. doi:10.1006/plas.1995.1018.
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1639972Tauch, A., KASSING, F., Kalinowski, J. & Pühler, A. (1995). The Corynebacterium xerosis composite transposon Tn5432 consists of two identical insertion sequences, designated IS1249, flanking the erythromycin resistance gene ermCX. Plasmid, 34(2), 119-131. ACADEMIC PRESS INC JNL-COMP SUBSCRIPTIONS. doi:10.1006/plas.1995.9995.
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1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1642272Tauch, A., Kirchner, O., Wehmeier, L., Kalinowski, J. & Pühler, A. (1994). Corynebacterium glutamicum DNA is subjected to methylation-restriction in Escherichia coli. FEMS MICROBIOLOGY LETTERS, 123(3), 343-347. ELSEVIER SCIENCE BV. doi:10.1016/0378-1097(94)90216-X.
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1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1643046SCHAEFER, A., Tauch, A., JAEGER, W., Kalinowski, J., THIERBACH, G. & Pühler, A. (1994). Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum. Gene, 145(1), 69-73. ELSEVIER SCIENCE BV. doi:10.1016/0378-1119(94)90324-7.