164 Publikationen
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2969067Reardon-Robinson, Melissa E, Nguyen, Minh Tan, Sanchez, Belkys C, Osipiuk, Jerzy, Rückert, Christian, Chang, Chungyu, Chen, Bo, et al. 2023. “A cryptic oxidoreductase safeguards oxidative protein folding in Corynebacterium diphtheriae”. Proceedings of the National Academy of Sciences of the United States of America 120 (8): e2208675120.
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2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2962518Scheible, Matthew, Nguyen, Cuong T, Luong, Truc Thanh, Lee, Ju Huck, Chen, Yi-Wei, Chang, Chungyu, Wittchen, Manuel, et al. 2022. “The Fused Methionine Sulfoxide Reductase MsrAB Promotes Oxidative Stress Defense and Bacterial Virulence in Fusobacterium nucleatum”. mBio: e03022-21.
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2021 | Herausgeber*in Sammelwerk | Veröffentlicht | PUB-ID: 2958276Pühler, Alfred, Tauch, Andreas, and German Network for Bioinformatics Infrastructure (de.NBI), eds. 2021. Future-Oriented Analysis of Life Sciences Data by Artificial Intelligence : Contributions of the German Network for Bioinformatics Infrastructure. Bielefeld: Center for Biotechnology, de.NBI Administration Office.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956162Escorcia-Rodriguez, Juan M, Tauch, Andreas, and Freyre-Gonzalez, Julio A. 2021. “Corynebacterium glutamicum Regulation beyond Transcription: Organizing Principles and Reconstruction of an Extended Regulatory Network Incorporating Regulations Mediated by Small RNA and Protein-Protein Interactions”. Microorganisms 9 (7): 1395.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955516Wu, Chenggang, Chen, Yi-Wei, Scheible, Matthew, Chang, Chungyu, Wittchen, Manuel, Lee, Ju Huck, Luong, Truc T, et al. 2021. “Genetic and molecular determinants of polymicrobial interactions in Fusobacterium nucleatum”. Proceedings of the National Academy of Sciences of the United States of America 118 (23): e2006482118.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952730Luong, Truc Thanh, Nguyen, Minh Tan, Chen, Yi-Wei, Chang, Chungyu, Lee, Ju Huck, Wittchen, Manuel, Ton-That, HyLam, et al. 2021. “Ribonuclease J-Mediated mRNA Turnover Modulates Cell Shape, Metabolism and Virulence in Corynebacterium diphtheriae”. Microorganisms 9 (2): 389.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952732Parise, Doglas, Dornelles Parise, Mariana Teixeira, Pinto Gomide, Anne Cybelle, Aburjaile, Flavia Figueira, Kato, Rodrigo Bentes, Salgado-Albarran, Marisol, Tauch, Andreas, de Carvalho Azevedo, Vasco Ariston, and Baumbach, Jan. 2021. “The Transcriptional Regulatory Network of Corynebacterium pseudotuberculosis”. Microorganisms 9 (2): 415.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2953592Parise, Doglas, Parise, Mariana Teixeira Dornelles, Kataka, Evans, Kato, Rodrigo Bentes, List, Markus, Tauch, Andreas, Azevedo, Vasco Ariston de Carvalho, and Baumbach, Jan. 2021. “On the Consistency between Gene Expression and the Gene Regulatory Network of Corynebacterium glutamicum”. Network and systems medicine 4 (1): 51-59.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944331Escorcia-Rodriguez, Juan M, Tauch, Andreas, and Freyre-Gonzalez, Julio A. 2020. “Abasy Atlas v2.2: The most comprehensive and up-to-date inventory of meta-curated, historical, bacterial regulatory networks, their completeness and system-level characterization.”. Computational and structural biotechnology journal 18: 1228-1237.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943411Parise, Mariana Teixeira Dornelles, Parise, Doglas, Kato, Rodrigo Bentes, Pauling, Josch Konstantin, Tauch, Andreas, Azevedo, Vasco Ariston de Carvalho, and Baumbach, Jan. 2020. “CoryneRegNet 7, the reference database and analysis platform for corynebacterial gene regulatory networks.”. Scientific data 7 (1): 142.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956709Wibberg, Daniel, Batut, Bérénice, Belmann, Peter, Blom, Jochen, Glöckner, Frank Oliver, Grüning, Björn, Hoffmann, Nils, et al. 2019. “The de.NBI / ELIXIR-DE training platform - Bioinformatics training in Germany and across Europe within ELIXIR”. F1000Research 8: 1877.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948766Wibberg, Daniel, Batut, Berenice, Belmann, Peter, Blom, Jochen, Glockner, Frank Oliver, Gruning, Bjorn, Hoffmann, Nils, et al. 2019. “The de.NBI / ELIXIR-DE training platform - Bioinformatics training in Germany and across Europe within ELIXIR”. F1000Research 8: 1877 .
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920311Abdali, Narges, Younas, Farhan, Mafakheri, Samaneh, Pothula, Karunakar R., Kleinekathoefer, Ulrich, Tauch, Andreas, and Benz, Roland. 2018. “Identification and characterization of smallest pore-forming protein in the cell wall of pathogenic Corynebacterium urealyticum DSM 7109”. BMC BIOCHEMISTRY 19 (1): 18.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916925Engel, Kathrin, Sauer, Jan, Jünemann, Sebastian, Winkler, Anika, Wibberg, Daniel, Kalinowski, Jörn, Tauch, Andreas, and Caspers, Barbara. 2018. “Individual- and Species-Specific Skin Microbiomes in Three Different Estrildid Finch Species Revealed by 16S Amplicon Sequencing”. Microbial Ecology 76 (2): 518-529.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917296Wittchen, Manuel, Busche, Tobias, Gaspar, Andrew H., Lee, Ju Huck, Ton-That, Hung, Kalinowski, Jörn, and Tauch, Andreas. 2018. “Transcriptome sequencing of the human pathogen Corynebacterium diphtheriae NCTC 13129 provides detailed insights into its transcriptional landscape and into DtxR-mediated transcriptional regulation”. BMC Genomics 19 (1): 82.
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2017 | Zeitschriftenaufsatz | PUB-ID: 2911058Tauch, Andreas, and Al-Dilaimi, Arwa. 2017. “Bioinformatics in Germany: toward a national-level infrastructure”. Briefings in Bioinformatics 20 (2): 370-374.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913472Rodríguez-Castillo, JG, Pino, C, Niño, LF, Rozo, JC, Llerena-Polo, C, Parra-López, CA, Tauch, Andreas, and Murcia-Aranguren, MI. 2017. “Comparative genomic analysis of Mycobacterium tuberculosis Beijing-like strains revealed specific genetic variations associated with virulence and drug resistance.”. Infect Genet Evol 54: 314-323.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907317Freyre-González, Julio A., and Tauch, Andreas. 2017. “Functional architecture and global properties of the Corynebacterium glutamicum regulatory network: Novel insights from a dataset with a high genomic coverage”. Journal of Biotechnology 257: 199-210.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908585Zuñiga-Bahamon, Andres, Tobar-Tosse, Fabian, Guillermo-Ortega, José, Wibberg, Daniel, and Tauch, Andreas. 2016. “Draft Genome Sequence of Streptococcus anginosus BVI, a New Vaginal Pathogen Candidate”. Genome Announcements 4 (6): e01417-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904541Ibarra-Arellano, Miguel A., Campos-Gonzalez, Adrian I., Trevino-Quintanilla, Luis G., Tauch, Andreas, and Freyre-Gonzalez, Julio A. 2016. “Abasy Atlas: a comprehensive inventory of systems, global network properties and systems-level elements across bacteria”. DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 2016: baw089.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904501Tauch, Andreas, Fernández-Natal, Isabel, and Soriano, Francisco. 2016. “A microbiological and clinical review on Corynebacterium kroppenstedtii”. International Journal of Infectious Diseases 48: 33-39.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907319Fernández-Natal, I., Rodríguez-Lázaro, D., Marrodán-Ciordia, T., Sáez-Nieto, J.A., Valdezate, S., Rodríguez-Pollán, H., Tauch, Andreas, and Soriano, F. 2016. “Characterization and antimicrobial susceptibility of one antibiotic-sensitive and one multidrug-resistant Corynebacterium kroppenstedtii strain isolated from patients with granulomatous mastitis”. New Microbes and New Infections 14: 93-97.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907322Gonzalez-Perez, M.N., Murcia, M.I., Parra-Lopez, C., Blom, J., and Tauch, Andreas. 2016. “Deciphering the virulence factors of the opportunistic pathogen Mycobacterium colombiense”. New Microbes and New Infections 14: 98-105.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905166Soares, Siomar C., Geyik, Hakan, Ramos, Rommel T. J., de Sá, Pablo H. C. G., Barbosa, Eudes G. V., Baumbach, Jan, Figueiredo, Henrique C. P., et al. 2016. “GIPSy: Genomic island prediction software”. Journal of Biotechnology 232: 2-11.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902951Valero-Guillén, Pedro L., Fernández-Natal, Isabel, Marrodán-Ciordia, Teresa, Tauch, Andreas, and Soriano, Francisco. 2016. “Ether-linked lipids of Dermabacter hominis, a human skin actinobacterium”. Chemistry and Physics of Lipids 196: 24-32.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2753051Rückert, Christian, Albersmeier, Andreas, Winkler, Anika, and Tauch, Andreas. 2015. “Complete Genome Sequence of Corynebacterium kutscheri DSM 20755, a Corynebacterial Type Strain with Remarkably Low G+C Content of Chromosomal DNA”. Genome announcements 3 (3): e00571-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2753057Rückert, Christian, Albersmeier, Andreas, Winkler, Anika, and Tauch, Andreas. 2015. “Complete Genome Sequence of Corynebacterium camporealensis DSM 44610, Isolated from the Milk of a Manchega Sheep with Subclinical Mastitis”. Genome announcements 3 (3): e00572-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2756572Fernández-Natal, Maria Isabel, Soriano, Francisco, Ariza-Miguel, Jaime, Marrodan-Ciordia, Teresa, Acedo, Alberto, Hernandez, Marta, Tauch, Andreas, and Rodríguez-Lázaro, David. 2015. “Draft Genome Sequences of Corynebacterium kroppenstedtii CNM633/14 and CNM632/14, Multidrug-Resistant and Antibiotic-Sensitive Isolates from Nodules of Granulomatous Mastitis Patients”. Genome announcements 3 (3): e00525-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2735420Rodríguez, Juan Germán, Pino, Camilo, Tauch, Andreas, and Murcia, Martha Isabel. 2015. “Complete Genome Sequence of the Clinical Beijing-Like StrainMycobacterium tuberculosis323 Using the PacBio Real-Time Sequencing Platform”. Genome Announcements 3 (2): e00371-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2728042Merten, Madlen, Brinkrolf, Karina, Albersmeier, Andreas, Kutter, Yvonne, Rückert, Christian, and Tauch, Andreas. 2015. “Complete Genome Sequence and Annotation of Corynebacterium singulare DSM 44357, Isolated from a Human Semen Specimen”. Genome Announcements 3 (2): e00183-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2769395Rückert, Christian, Eimer, Janine, Winkler, Anika, and Tauch, Andreas. 2015. “Complete Genome Sequence of the Type Strain Corynebacterium epidermidicanis DSM 45586, Isolated from the Skin of a Dog Suffering from Pruritus”. Genome announcements 3 (4): e00959-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764419Fernández-Natal, Maria Isabel, Soriano, Francisco, Acedo, Alberto, Hernandez, Marta, Tauch, Andreas, and Rodríguez-Lázaro, David. 2015. “Draft Genome Sequences of the Two Unrelated Macrolide-Resistant Corynebacterium argentoratense Strains CNM 463/05 and CNM 601/08, Isolated from Patients in the University Hospital of León, Spain”. Genome announcements 3 (4): e00765-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765190Rückert, Christian, Kriete, Martin, Jaenicke, Sebastian, Winkler, Anika, and Tauch, Andreas. 2015. “Virulence Factor Genes Detected in the Complete Genome Sequence of Corynebacterium uterequi DSM 45634, Isolated from the Uterus of a Maiden Mare”. Genome announcements 3 (4): e00783-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765197Rückert, Christian, Kriete, Martin, Jaenicke, Sebastian, Winkler, Anika, and Tauch, Andreas. 2015. “Complete Genome Sequence of the Type Strain Corynebacterium testudinoris DSM 44614, Recovered from Necrotic Lesions in the Mouth of a Tortoise”. Genome announcements 3 (4): e00784-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2775257Rückert, Christian, Eimer, Janine, Winkler, Anika, and Tauch, Andreas. 2015. “Complete Genome Sequence of the Type Strain Corynebacterium mustelae DSM 45274, Isolated from Various Tissues of a Male Ferret with Lethal Sepsis”. Genome announcements 3 (5): e01012-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2786809Tauch, Andreas, and Burkovski, Andreas. 2015. “Molecular armory or niche factors: virulence determinants of Corynebacterium species”. FEMS Microbiology Letters 362 (23): fnv185.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2772399Hacker, Elena, Tauch, Andreas, Hasselt, Kristin, Mattos-Guaraldi, Ana Luiza, Ott, Lisa, and Burkovski, Andreas. 2015. “Colonization of human epithelial cell lines by Corynebacterium ulcerans from human and animal sources”. Microbiology 161 (8): 1582-1591.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705365Tippelt, Anna, Albersmeier, Andreas, Brinkrolf, Karina, Rückert, Christian, Fernández-Natal, Isabel, Soriano, Francisco, and Tauch, Andreas. 2014. “Complete Genome Sequence of Corynebacterium ureicelerivorans DSM 45051, a Lipophilic and Urea-Splitting Isolate from the Blood Culture of a Septicemia Patient”. Genome announcements 2 (6).
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705374Möllmann, Sabrina, Albersmeier, Andreas, Rückert, Christian, and Tauch, Andreas. 2014. “Complete Genome Sequence of Corynebacterium imitans DSM 44264, Isolated from a Five-Month-Old Boy with Suspected Pharyngeal Diphtheria”. Genome announcements 2 (6).
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2710114Townsend, Philip D, Jungwirth, Britta, Pojer, Florence, Bußmann, Michael, Money, Victoria A, Cole, Stewart T, Pühler, Alfred, et al. 2014. “The Crystal Structures of Apo and cAMP-Bound GlxR from Corynebacterium glutamicum Reveal Structural and Dynamic Changes upon cAMP Binding in CRP/FNR Family Transcription Factors”. PloS one 9 (12): e113265.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662834Glaub, Alina, Bomholt, Christina, Gravermann, Kerstin, Brinkrolf, Karina, Albersmeier, Andreas, Rückert, Christian, and Tauch, Andreas. 2014. “Complete Genome Sequence of Corynebacterium falsenii DSM 44353 To Study the Evolution of Corynebacterium Cluster 3 Species”. Genome announcements 2 (2).
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2692360Tippelt, Anna, Möllmann, Sabrina, Albersmeier, Andreas, Jaenicke, Sebastian, Rückert, Christian, and Tauch, Andreas. 2014. “Mycolic Acid Biosynthesis Genes in the Genome Sequence of Corynebacterium atypicum DSM 44849”. Genome announcements 2 (4).
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2687120Albersmeier, Andreas, Bomholt, Christina, Glaub, Alina, Rückert, Christian, Soriano, Francisco, Fernández-Natal, Isabel, and Tauch, Andreas. 2014. “Draft Genome Sequence of the Multidrug-Resistant Clinical Isolate Dermabacter hominis 1368”. Genome announcements 2 (4).
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2014 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2694187Brinkrolf, Karina, Hoffrogge, Raimund, Hackl, Matthias, Tauch, Andreas, Baumann, Martina, Noll, Thomas, Goesmann, Alexander, Pühler, Alfred, and Borth, Nicole. 2014. “Functional -Omics for Cell Lines and Processes - The -Omics Technologies on the Example of CHO Cells”. In Animal Cell Biotechnology In Biologics Production, ed. Hansjörg Hauser and Roland Wagner, 702. Berlin, Germany: Walter de Gruyter.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685988Jakobi, Tobias, Brinkrolf, Karina, Tauch, Andreas, Noll, Thomas, Stoye, Jens, Pühler, Alfred, and Goesmann, Alexander. 2014. “Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing”. Journal of Biotechnology 190: 64-75.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676552Becker, Jennifer, Timmermann, Christina, Rupp, Oliver, Albaum, Stefan, Brinkrolf, Karina, Goesmann, Alexander, Pühler, Alfred, Tauch, Andreas, and Noll, Thomas. 2014. “Transcriptome analyses of CHO cells with the next-generation microarray CHO41K: Development and validation by analysing the influence of the growth stimulating substance IGF-1 substitute LongR(3.)”. Journal of biotechnology 178: 23-31.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2634035Soltan Mohammadi, Nafiseh, Mafakheri, Samaneh, Abdali, Narges, Bárcena-Uribarri, Iván, Tauch, Andreas, and Benz, Roland. 2013. “Identification and characterization of the channel-forming protein in the cell wall of Corynebacterium amycolatum”. Biochimica et biophysica acta 1828 (11): 2574-2582.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2634054Abdali, Narges, Barth, Enrico, Norouzy, Amir, Schulz, Robert, Nau, Werner M, Kleinekathöfer, Ulrich, Tauch, Andreas, and Benz, Roland. 2013. “Corynebacterium jeikeium jk0268 Constitutes for the 40 Amino Acid Long PorACj, Which Forms a Homooligomeric and Anion-Selective Cell Wall Channel”. PloS one 8 (10): e75651.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2632081Pereira, U. P., Soares, S. C., Blom, J., Leal, C. A. G., Ramos, R. T. J., Guimarães, L. C., Oliveira, L. C., et al. 2013. “In silico prediction of conserved vaccine targets in Streptococcus agalactiae strains isolated from fish, cattle, and human samples”. Genetics and molecular research : GMR 12 (3): 2902-2912.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2582332Guimarães, Luis C., Soares, Siomar C., Albersmeier, Andreas, Blom, Jochen, Jaenicke, Sebastian, Azevedo, Vasco, Soriano, Francisco, Tauch, Andreas, and Trost, Eva. 2013. “Complete Genome Sequence of Corynebacterium urealyticum Strain DSM 7111, Isolated from a 9-Year-Old Patient with Alkaline-Encrusted Cystitis”. Genome announcements 1 (3): e00264-13.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2552500Soares, S.C., Silva, A., Trost, Eva, Blom, Jochen, Ramos, R., Carneiro, A., Ali, A., et al. 2013. “The Pan-Genome of the Animal Pathogen Corynebacterium pseudotuberculosis Reveals Differences in Genome Plasticity between the Biovar ovis and equi Strains”. PLoS ONE 8 (1): e53818.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2629377Bomholt, Christina, Glaub, Alina, Gravermann, Kerstin, Albersmeier, Andreas, Brinkrolf, Karina, Rückert, Christian, and Tauch, Andreas. 2013. “Whole-Genome Sequence of the Clinical Strain Corynebacterium argentoratense DSM 44202, Isolated from a Human Throat Specimen”. Genome announcements 1 (5): e00793-13.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2560776Barzantny, Helena, Guttmann, Sarah, Lässig, Charlotte, Brune, Iris, and Tauch, Andreas. 2013. “Transcriptional control of lipid metabolism by the MarR-like regulator FamR and the global regulator GlxR in the lipophilic axilla isolateCorynebacterium jeikeiumK411”. Microbial Biotechnology 6 (2): 118-130.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2614869Soares, Siomar C., Trost, Eva, Ramos, Rommel T. J., Carneiro, Adriana R., Santos, Anderson R., Pinto, Anne C., Barbosa, Eudes, et al. 2013. “Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production”. Journal of Biotechnology 167 (2): 135-141.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548270Jungwirth, Britta, Sala, Claudia, Kohl, Thomas A, Uplekar, Swapna, Baumbach, Jan, Cole, Stewart T, Pühler, Alfred, and Tauch, Andreas. 2013. “High-resolution detection of DNA binding sites of the global transcriptional regulator GlxR in Corynebacterium glutamicum”. Microbiology 159 (Pt_1): 12-22.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641278Ramos, Rommel Thiago Jucá, Carneiro, Adriana Ribeiro, de Castro Soares, Siomar, Barbosa, Silvanira, Varuzza, Leonardo, Orabona, Guilherme, Tauch, Andreas, Azevedo, Vasco, Schneider, Maria Paula, and Silva, Artur. 2013. “High efficiency application of a mate-paired library from next-generation sequencing to postlight sequencing: Corynebacterium pseudotuberculosis as a case study for microbial de novo genome assembly”. Journal of microbiological methods 95 (3): 441-447.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2615581Brinkrolf, Karina, Rupp, Oliver, Laux, Holger, Kollin, Florian, Ernst, Wolfgang, Linke, Burkhard, Kofler, Rudolf, et al. 2013. “Chinese hamster genome sequenced from sorted chromosomes”. Nature Biotechnology 31 (8): 694-695.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2584431Barreiro, Carlos, González-Lavado, Eva, Brand, Sven, Tauch, Andreas, and Martín, Juan F. 2013. “Heat Shock Proteome Analysis of Wild-Type Corynebacterium glutamicum ATCC 13032 and a Spontaneous Mutant Lacking GroEL1, a Dispensable Chaperone”. Journal of bacteriology 195 (11): 2707.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2606908Fredrich, Eugenie, Barzantny, Helena, Brune, Iris, and Tauch, Andreas. 2013. “Daily battle against body odor: towards the activity of the axillary microbiota”. Trends in microbiology 21 (6): 305-312.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2703752Fernández-Natal, I, Sáez-Nieto, J A, Medina-Pascual, M J, Albersmeier, A, Valdezate, S, Guerra-Laso, J M, Rodríguez, H, et al. 2013. “Dermabacter hominis: a usually daptomycin-resistant gram-positive organism infrequently isolated from human clinical samples”. New microbes and new infections 1 (3): 35-40.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498160Schröder, Jasmin, Maus, Irena, Meyer, Katja, Wördemann, Stephanie, Blom, Jochen, Jaenicke, Sebastian, Schneider, Jessica, Trost, Eva, and Tauch, Andreas. 2012. “Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient”. BMC Genomics 13 (1): 141.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2477132Soares, Siomar C., Abreu, Vinicius A. C., Ramos, Rommel T. J., Cerdeira, Louise, Silva, Artur, Baumbach, Jan, Trost, Eva, et al. 2012. “PIPS: Pathogenicity Island Prediction Software”. PLoS ONE 7 (2): e30848.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513347Trost, Eva, Blom, Jochen, de Castro Soares, Siomar, Huang, I-Hsiu, Al-Dilaimi, Arwa, Schröder, Jasmin, Jaenicke, Sebastian, et al. 2012. “Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia”. Journal of bacteriology 194 (12): 3199-3215.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471667Sabbadini, Priscila Soares, Assis, Maria Cristina, Trost, Eva, Gomes, Debora Leandro Rama, Moreira, Lilian Oliveira, Dos Santos, Cintia Silva, Pereira, Gabriela Andrade, et al. 2012. “Corynebacterium diphtheriae 67-72p hemagglutinin, characterized as the protein DIP0733, contributes to invasion and induction of apoptosis in HEp-2 cells”. Microbial Pathogenesis 52 (3): 165-176.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2474002Schneider, Jessica, Rupp, Oliver, Trost, Eva, Jaenicke, Sebastian, Passoth, V., Goesmann, Alexander, Tauch, Andreas, and Brinkrolf, Karina. 2012. “Genome sequence of Wickerhamomyces anomalus DSM 6766 reveals genetic basis of biotechnologically important antimicrobial activities”. FEMS Yeast Research 12 (3): 382-386.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471873Pauling, Josch, Rottger, Richard, Tauch, Andreas, Azevedo, Vasco, and Baumbach, Jan. 2012. “CoryneRegNet 6.0--Updated database content, new analysis methods and novel features focusing on community demands”. Nucleic Acids Research 40 (D1): D610-D614.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2544774Schneider, Jessica, Andrea, Heiko, Blom, Jochen, Jaenicke, Sebastian, Rückert, Christian, Schorsch, Christoph, Szczepanowski, Rafael, et al. 2012. “Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10”. Eukaryotic Cell 11 (12): 1582-1583.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500805Barzantny, Helena, Schröder, Jasmin, Strotmeier, Jasmin, Fredrich, Eugenie, Brune, Iris, and Tauch, Andreas. 2012. “The transcriptional regulatory network of Corynebacterium jeikeium K411 and its interaction with metabolic routes contributing to human body odor formation”. Journal of biotechnology 159 (3): 235-248.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500812Schröder, Jasmin, Maus, Irena, Ostermann, Anna Lena, Kogler, Anna Christina, and Tauch, Andreas. 2012. “Binding of the IclR-type regulator HutR in the histidine utilization (hut) gene cluster of the human pathogen Corynebacterium resistens DSM 45100”. FEMS Microbiology Letters 331 (2): 136-143.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2530885Brinkrolf, Karina, Schneider, Jessica, Knecht, Marina, Rückert, Christian, and Tauch, Andreas. 2012. “Draft Genome Sequence of Turicella otitidis ATCC 51513, Isolated from Middle Ear Fluid from a Child with Otitis Media”. Journal of Bacteriology 194 (21): 5968-5969.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2518300Schröder, Jasmin, Glaub, Alina, Schneider, Jessica, Trost, Eva, and Tauch, Andreas. 2012. “Draft genome sequence of Corynebacterium bovis DSM 20582, which causes clinical mastitis in dairy cows”. Journal of Bacteriology 194 (16): 4437-4437.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2523617Lobo, Francisco P, Rodrigues, Maira R, Rodrigues, Gisele O L, Hilario, Heron O, Souza, Raoni A, Tauch, Andreas, Miyoshi, Anderson, Franco, Glaura C, Azevedo, Vasco, and Franco, Gloria R. 2012. “KOMODO: a web tool for detecting and visualizing biased distribution of groups of homologous genes in monophyletic taxa”. Nucleic Acids Research 40 (W1): W491-W497.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513207Barreiro, Carlos, Prieto, Carlos, Sola-Landa, Alberto, Solera, Elena, Martinez-Castro, Miriam, Perez-Redondo, Rosario, Garcia-Estrada, Carlos, et al. 2012. “Draft Genome of Streptomyces tsukubaensis NRRL 18488, the Producer of the Clinically Important Immunosuppressant Tacrolimus (FK506)”. Journal of bacteriology 194 (14): 3756-3757.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513297Pauling, Josch, Rottger, Richard, Neuner, Andreas, Salgado, Heladia, Collado-Vides, Julio, Kalaghatgi, Prabhav, Azevedo, Vasco, Tauch, Andreas, Pühler, Alfred, and Baumbach, Jan. 2012. “On the trail of EHEC/EAEC-unraveling the gene regulatory networks of human pathogenic Escherichia coli bacteria”. Integrative Biology 4 (7): 728-733.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289971Ruiz, Jeronimo C., D'Afonseca, Vivian, Silva, Artur, Ali, Amjad, Pinto, Anne C., Santos, Anderson R., Rocha, Aryanne A. M. C., et al. 2011. “Evidence for Reductive Genome Evolution and Lateral Acquisition of Virulence Functions in Two Corynebacterium pseudotuberculosis Strains”. PLoS ONE 6 (4): e18551.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2442587Schröder, Jasmin, Maus, Irena, Trost, Eva, and Tauch, Andreas. 2011. “Complete genome sequence of Corynebacterium variabile DSM 44702 isolated from the surface of smear-ripened cheeses and insights into cheese ripening and flavor generation”. BMC Genomics 12 (1): 545.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354752Trost, Eva, Al-Dilaimi, Arwa, Papavasiliou, Panagiotis, Schneider, Jessica, Viehöver, Prisca, Burkovski, Andreas, Soares, Siomar C., et al. 2011. “Comparative analysis of two complete Corynebacterium ulcerans genomes and detection of candidate virulence factors”. BMC Genomics 12 (1): 383.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375552Chaparro, Paula Juliana Perez, McCulloch, John Anthony, Cerdeira, Louise Teixeira, Al-Dilaimi, Arwa, de Sa, Lena Lillian Canto, Oliveira de, Rodrigo, Tauch, Andreas, Carvalho Azevedo de, Vasco Ariston, Schneider, Maria Paula Cruz, and Costa da Silva da, Artur Luiz. 2011. “Whole genome sequencing of environmental Vibrio cholerae O1 from 10 nanograms of DNA using short reads”. Journal of Microbiological Methods 87 (2): 208-212.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2473990Brune, Iris, Götker, Susanne, Schneider, Jessica, Rodionov, D.A., and Tauch, Andreas. 2011. “Negative transcriptional control of biotin metabolism genes by the TetR-type regulator BioQ in biotin-auxotrophic Corynebacterium glutamicum ATCC 13032”. Journal of Biotechnology 159 (3): 225-234.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375645Barzantny, Helena, Brune, Iris, and Tauch, Andreas. 2011. “Molecular basis of human body odour formation: insights deduced from corynebacterial genome sequences”. International Journal of Cosmetic Science 34 (1): 2-11.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396576Becker, Jennifer, Hackel, M, Jakobi, Tobias, Rupp, Oliver, Schneider, Jessica, Szczepanowski, Rafael, Bekel, Thomas, et al. 2011. “Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing”. Journal of Biotechnology 156 (3): 227-235.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445Schneider, Jessica, Blom, Jochen, Jaenicke, Sebastian, Linke, Burkhard, Brinkrolf, Karina, Neuweger, Heiko, Tauch, Andreas, and Goesmann, Alexander. 2011. “RAPYD - Rapid Annotation Platform for Yeast Data”. Journal of Biotechnology 155 (1): 118-126.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326568Cerdeira, Louise Teixeira, Carneiro, Adriana Ribeiro, Juca Ramos, Rommel Thiago, de Almeida, Sintia Silva, D'Afonseca, Vivian, Cruz Schneider, Maria Paula, Baumbach, Jan, et al. 2011. “Rapid hybrid de novo assembly of a microbial genome using only short reads: Corynebacterium pseudotuberculosis I19 as a case study”. Journal of Microbiological Methods 86 (2): 218-223.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2454721Cerdeira, Louise Teixeira, Cruz Schneider, Maria Paula, Pinto, Anne Cybelle, de Almeida, Sintia Silva, dos Santos, Anderson Rodrigues, Vieira Barbosa, Eudes Guilherme, Ali, Amjad, et al. 2011. “Complete Genome Sequence of Corynebacterium pseudotuberculosis Strain CIP 52.97, Isolated from a Horse in Kenya”. Journal of Bacteriology 193 (24): 7025-7026.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2411181Cerdeira, Louise Teixeira, Pinto, Anne Cybelle, Schneider, Maria Paula Cruz, de Almeida, Sintia Silva, Dos Santos, Anderson Rodrigues, Barbosa, Eudes Guilherme Vieira, Ali, Amjad, et al. 2011. “Whole-Genome Sequence of Corynebacterium pseudotuberculosis PAT10 Strain Isolated from Sheep in Patagonia, Argentina”. Journal of Bacteriology 193 (22): 6420-6421.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1968054Silva, Artur, Schneider, Maria Paula C., Cerdeira, Louise, Barbosa, Maria Silvanira, Ramos, Rommel Thiago J., Carneiro, Adriana R., Santos, Rodrigo, et al. 2011. “Complete Genome Sequence of Corynebacterium pseudotuberculosis I19, a Strain Isolated from a Cow in Israel with Bovine Mastitis”. Journal of Bacteriology 193 (1): 323-324.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003316Jochmann, Nina, Götker, Susanne, and Tauch, Andreas. 2011. “Positive transcriptional control of the pyridoxal phosphate biosynthesis genes pdxST by the MocR-type regulator PdxR of Corynebacterium glutamicum ATCC 13032”. Microbiology 157 (1): 77-88.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003180Brune, Iris, Barzantny, Helena, Kloetzel, Marianne, Jones, Janette, James, Gordon, and Tauch, Andreas. 2011. “Identification of McbR as transcription regulator of aecD and genes involved in methionine and cysteine biosynthesis in Corynebacterium jeikeium K411”. Journal of Biotechnology 151 (1): 22-29.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1966439Trost, Eva, Ott, Lisa, Schneider, Jessica, Schröder, Jasmin, Jaenicke, Sebastian, Goesmann, Alexander, Husemann, Peter, et al. 2010. “The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence”. BMC Genomics 11 (1): 728.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929692Schneider, Jessica, Vorhölter, Frank-Jörg, Trost, Eva, Blom, Jochen, Musa, Y. R., Neuweger, Heiko, Niehaus, Karsten, Schatschneider, Sarah, Tauch, Andreas, and Goesmann, Alexander. 2010. “CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks”. Genetics and Molecular Research 9 (3): 1660-1672.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785275Trost, Eva, Götker, Susanne, Schneider, Jessica, Schneiker-Bekel, Susanne, Szczepanowski, Rafael, Tilker, Alexandra, Viehöver, Prisca, et al. 2010. “Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion”. BMC Genomics 11 (1): 91.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1794411Schröder, Jasmin, and Tauch, Andreas. 2010. “Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network”. FEMS Microbiology Reviews 34 (5): 685-737.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796468Sterthoff, Charlott, Lang, Alexander E., Schwan, Carsten, Tauch, Andreas, and Aktories, Klaus. 2010. “Functional Characterization of an Extended Binding Component of the Actin-ADP-Ribosylating C2 Toxin Detected in Clostridium botulinum Strain (C) 2300”. INFECTION AND IMMUNITY 78 (4): 1468-1474.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635951Nentwich, Svenja S., Brinkrolf, Karina, Gaigalat, Lars, Hueser, Andrea T., Rey, Daniel A., Mohrbach, Tobias, Marin, Kay, Pühler, Alfred, Tauch, Andreas, and Kalinowski, Jörn. 2009. “Characterization of the Lacl-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032”. MICROBIOLOGY 155 (1): 150-164.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929146Baumbach, Jan, Wittkop, Tobias, Kleindt, Christiane Katja, and Tauch, Andreas. 2009. “Integrated analysis and reconstruction of microbial transcriptional gene regulatory networks using CoryneRegNet”. Nature Protocols 4 (6): 992-1005.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092120Lobo, Francisco P, Mota, Bruno E F, Pena, Sergio D J, Azevedo, Vasco, Macedo, Andrea M, Tauch, Andreas, Machado, Carlos R, and Franco, Gloria R. 2009. “Virus-host coevolution: common patterns of nucleotide motif usage in Flaviviridae and their hosts”. PLoS One 4 (7): e6282.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635321Dondrup, Michael, Albaum, Stefan, Griebel, Thasso, Henckel, Kolja, Jünemann, Sebastian, Kahlke, Tim, Kleindt, Christiane Katja, et al. 2009. “EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data”. BMC Bioinformatics 10 (1): 50.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589932Kohl, Thomas, and Tauch, Andreas. 2009. “The GlxR regulon of the amino acid producer Corynebacterium glutamicum: Detection of the corynebacterial core regulon and integration into the transcriptional regulatory network model”. JOURNAL OF BIOTECHNOLOGY 143 (4): 239-246.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1633812Jochmann, Nina, Kurze, Anna-Katharina, Czaja, Lisa F., Brinkrolf, Karina, Brune, Iris, Hueser, Andrea T., Hansmeier, Nicole, Pühler, Alfred, Borovok, Ilya, and Tauch, Andreas. 2009. “Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays”. MICROBIOLOGY 155 (5): 1459-1477.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635928Baumbach, Jan, Tauch, Andreas, and Rahmann, Sven. 2009. “Towards the integrated analysis, visualization and reconstruction of microbial gene regulatory networks”. BRIEFINGS IN BIOINFORMATICS 10 (1): 75-83.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592024Vorhölter, Frank-Jörg, Schneiker-Bekel, Susanne, Goesmann, Alexander, Krause, Lutz, Bekel, Thomas, Kaiser, Olaf, Linke, Burkhard, et al. 2008. “The genome of Xanthomonas campestris pv. campestris B 100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis”. Journal of Biotechnology 134 (1-2): 33-45.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588078Brinkrolf, Karina, Ploeger, Svenja, Solle, Sandra, Brune, Iris, Nentwich, Svenia S., Hueser, Andrea T., Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. 2008. “The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences”. MICROBIOLOGY 154 (4): 1068-1081.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592210Jungwirth, Britta, Emer, Denise, Brune, Iris, Hansmeier, Nicole, Pühler, Alfred, Eikmanns, Bernhard J., and Tauch, Andreas. 2008. “Triple transcriptional control of the resuscitation promoting factor 2 (rpf2) gene of Corynebacterium glutamicum by the regulators of acetate metabolism RamA and RamB and the cAMP-dependent regulator GlxR”. FEMS MICROBIOLOGY LETTERS 281 (2): 190-197.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586009Krause, Lutz, Diaz, Naryttza N., Edwards, Robert A., Gartemann, Karl-Heinz, Krömeke, Holger, Neuweger, Heiko, Pühler, Alfred, et al. 2008. “Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor”. JOURNAL OF BIOTECHNOLOGY 136 (1-2): 91-101.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586719Kohl, Thomas, Baumbach, Jan, Jungwirth, Britta, Pühler, Alfred, and Tauch, Andreas. 2008. “The GlxR regulon of the amino acid producer Corynebacterium glutamicum: In silico and in vitro detection of DNA binding sites of a global transcription regulator”. JOURNAL OF BIOTECHNOLOGY 135 (4): 340-350.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587508Soriano, F., and Tauch, Andreas. 2008. “Microbiological and clinical features of Corynebacterium urealyticum: urinary tract stones and genomics as the Rosetta Stone”. CLINICAL MICROBIOLOGY AND INFECTION 14 (7): 632-643.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585987Schlüter, Andreas, Bekel, Thomas, Diaz, Naryttza N., Dondrup, Michael, Eichenlaub, Rudolf, Gartemann, Karl-Heinz, Krahn, Irene, et al. 2008. “The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology”. Journal of Biotechnology 136 (1-2): 77-90.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585918Tauch, Andreas, Trost, Eva, Tilker, Alexandra, Ludewig, Ulrike, Schneiker-Bekel, Susanne, Goesmann, Alexander, Arnold, Walter, et al. 2008. “The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing”. Journal of Biotechnology 136 (1-2): 11-21.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586785Oehm, Sebastian, Gilbert, David, Tauch, Andreas, Stoye, Jens, and Goesmann, Alexander. 2008. “Comparative Pathway Analyzer - a web server for comparative analysis, clustering and visualization of metabolic networks in multiple organisms”. NUCLEIC ACIDS RESEARCH 36 (Web Server): W433-W437.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585939Tauch, Andreas, Schneider, Jessica, Szczepanowski, Rafael, Tilker, Alexandra, Viehöver, Prisca, Gartemann, Karl-Heinz, Arnold, Walter, et al. 2008. “Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids”. Journal of Biotechnology 136 (1-2): 22-30.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1631701Swe, Pearl M., Heng, Nicholas C. K., Ting, Yi-Tian, Baird, Hayley J., Carne, Alan, Tauch, Andreas, Tagg, John R., and Jack, Ralph W. 2007. “ef1097 and ypkK encode enterococcin V583 and corynicin JK, members of a new family of antimicrobial proteins (bacteriocins) with modular structure from Gram-positive bacteria”. Microbiology 153 (10): 3218-3227.
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2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1594020Baumbach, Jan, Wittkop, Tobias, Rademacher, Katrin, Rahmann, Sven, Brinkrolf, Karina, and Tauch, Andreas. 2007. “CoryneRegNet 3.0 - An interactive systems biology platform for the analysis of gene regulatory networks in corynebacteria and Escherichia coli”. In Journal of Biotechnology, 129:279-289. JOURNAL OF BIOTECHNOLOGY. ELSEVIER SCIENCE BV.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1594426Hansmeier, Nicole, Chao, Tzu-Chiao, Daschkey, Svenja, Muesken, Mathias, Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. 2007. “A comprehensive proteome map of the lipid-requiring nosocomial pathogen Corynebacterium jeikeium K411”. PROTEOMICS 7 (7): 1076-1096.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596102Larisch, Christof, Nakunst, Diana, Hueser, Andrea T., Tauch, Andreas, and Kalinowski, Jörn. 2007. “The alternative sigma factor SigB of Corynebacterium glutamicum modulates global gene expression during transition from exponential growth to stationary phase”. BMC Genomics 8 (1): 4.
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2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1594000Brinkrolf, Karina, Brune, Iris, and Tauch, Andreas. 2007. “The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum”. In Journal of Biotechnology, 129:191-211. JOURNAL OF BIOTECHNOLOGY. ELSEVIER SCIENCE BV.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593371Nakunst, Diana, Larisch, Christof, Hueser, Andrea T., Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2007. “The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes”. JOURNAL OF BACTERIOLOGY 189 (13): 4696-4707.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783727Gaigalat, Lars, Schlüter, Jan-Philip, Hartmann, Michelle, Mormann, Sascha, Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2007. “The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate: sugar phosphotransferase system (PTS) in Corynebacterium glutamicum”. BMC Molecular Biology 8 (1): 104.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1632131Ventura, Marco, Canchaya, Carlos, Tauch, Andreas, Chandra, Govind, Fitzgerald, Gerald F., Chater, Keith F., and van Sinderen, Douwe. 2007. “Genomics of Actinobacteria: Tracing the evolutionary history of an ancient phylura”. Microbiol Mol Biol Rev 71 (3): 495-548.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2499499Baumbach, Jan, Brinkrolf, Karina, Wittkop, Tobias, Tauch, Andreas, and Rahmann, Sven. 2006. “CoryneRegNet 2: An integrative bioinformatics approach for reconstruction and comparison of transcriptional regulatory networks in prokaryotes”. Journal of Integrative Bioinformatics 3 (2): 24.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946381Brune, Iris, Becker, Anke, Paarmann, Daniel, Albersmeier, Andreas, Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. 2006. “Under the influence of the active deodorant ingredient 4-hydroxy-3-methoxybenzyl alcohol, the skin bacterium Corynebacterium jeikeium moderately responds with differential gene expression”. J Biotechnol 127 (1): 21-33.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773628Brune, Iris, Werner, Hendrikje, Hüser, Andrea T., Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. 2006. “The DtxR protein acting as dual transcriptional regulator directs a global regulatory network involved in iron metabolism of Corynebacterium glutamicum”. BMC Genomics 7 (1): 21.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597707Oikawa, Tadao, Tauch, Andreas, Schaffer, Steffen, and Fujioka, Toru. 2006. “Expression of alr gene from Corynebacterium glutamicum ATCC 13032 in Escherichia coli and molecular characterization of the recombinant alanine racemase”. JOURNAL OF BIOTECHNOLOGY 125 (4): 503-512.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599402Hansmeier, N., Chao, T. C., Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. 2006. “Mapping and comprehensive analysis of the extracellular and cell surface proteome of the human pathogen Corynebacterium diphtheriae”. PROTEOMICS 6 (8): 2465-2476.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599618Hansmeier, N, Albersmeier, Andreas, Tauch, Andreas, Damberg, T, Ros, R, Anselmetti, Dario, Pühler, Alfred, and Kalinowski, Jörn. 2006. “The surface (S)-layer gene cspB of Corynebacterium glutamicum is transcriptionally activated by a LuxR-type regulator and located on a 6 kb genomic island absent from the type strain ATCC 13032”. Microbiology 152 (4): 923-935.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600852Hansmeier, N., Chao, T. C., Pühler, Alfred, Tauch, Andreas, and Kalinowski, Jörn. 2006. “The cytosolic, cell surface and extracellular proteomes of the biotechnologically important soil bacterium Cornyebacterium efficiens YS-314 in comparison to those of Corynebacterium glutamicum ATCC 13032”. PROTEOMICS 6 (1): 233-250.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773632Baumbach, Jan, Brinkrolf, Karina, Czaja, Lisa F., Rahmann, Sven, and Tauch, Andreas. 2006. “CoryneRegNet: An ontology-based data warehouse of corynebacterial transcription factors and regulatory networks”. BMC Genomics 7 (1): 24.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773853Mormann, Sascha, Lömker, Alexander, Rückert, Christian, Gaigalat, Lars, Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2006. “Random mutagenesis in Corynebacterium glutamicum ATCC 13032 using an IS6100-based transposon vector identified the last unknown gene in the histidine biosynthesis pathway”. BMC Genomics 7 (1): 205.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599211Mahne, M., Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2006. “The Corynebacterium glutamicum gene pmt encoding a glycosyltransferase related to eukaryotic protein-O-mannosyltransferases is essential for glycosylation of the resuscitation promoting factor (Rpf2) and other secreted proteins”. FEMS MICROBIOLOGY LETTERS 259 (2): 226-233.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596705Brinkrolf, Karina, Brune, Iris, and Tauch, Andreas. 2006. “Transcriptional regulation of catabolic pathways for aromatic compounds in Corynebacterium glutamicum”. GENETICS AND MOLECULAR RESEARCH 5 (4): 773-789.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603458Hüser, A. T., Chassagnole, C., Lindley, N. D., Merkamm, M., Guyonvarch, A., Elisakova, V., Patek, M., et al. 2005. “Rational design of a Corynebacterium glutamicum pantothenate production strain and its characterization by metabolic flux analysis and genorne-wide transcriptional profiling”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71 (6): 3255-3268.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603821Rey, D. A., Nentwich, S. S., Koch, D. J., Rückert, Christian, Pühler, Alfred, Tauch, Andreas, and Kalinowski, Jörn. 2005. “The McbR repressor modulated by the effector substance S-adenosylhomocysteine controls directly the transcription of a regulon involved in sulphur metabolism of Corynebacterium glutamicum ATCC 13032”. MOLECULAR MICROBIOLOGY 56 (4): 871-887.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605160Barreiro, C, Gonzalez-Lavado, E, Brand, S, Tauch, Andreas, and Martin, JF. 2005. “Heat shock Proteome analysis of wild-type Corynebacterium glutamicum ATCC 13032 and a spontaneous mutant lacking GroEL1, a dispensable chaperone”. JOURNAL OF BACTERIOLOGY 187 (3): 884-889.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602137Koch, DJ, Rückert, Christian, Albersmeier, Andreas, Hüser, AT, Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2005. “The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate”. Mol Microbiol 58 (2): 480-494.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603317Tauch, Andreas, Kaiser, Olaf, Hain, Torsten, Goesmann, Alexander, Weisshaar, Bernd, Albersmeier, Andreas, Bekel, Thomas, et al. 2005. “Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora”. Journal of Bacteriology 187 (13): 4671-4682.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773606Brune, Iris, Brinkrolf, Karina, Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. 2005. “The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences”. BMC Genomics 6 (1): 86.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606500Tauch, Andreas, Bischoff, N., Pühler, Alfred, and Kalinowski, Jörn. 2004. “Comparative genomics identified two conserved DNA modules in a corynebacterial plasmid family present in clinical isolates of the opportunistic human pathogen Corynebacterium jeikeium”. PLASMID 52 (2): 102-118.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773130Hansmeier, Nicole, Bartels, Frank Wilco, Ros, Robert, Anselmetti, Dario, Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2004. “Classification of hyper-variable Corynebacterium glutamicum surface-layer proteins by sequence analyses and atomic force microscopy”. J Biotechnol 112 (1-2): 177-193.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612397Tauch, Andreas, Bischoff, N., Brune, Iris, and Kalinowski, Jörn. 2003. “Insights into the genetic organization of the Corynebacterium diphtheriae erythromycin resistance plasmid pNG2 deduced from its complete nucleotide sequence”. PLASMID 49 (1): 63-74.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610260Hartmann, M, Tauch, Andreas, Eggeling, L, Bathe, B, Mockel, B, Pühler, Alfred, and Kalinowski, Jörn. 2003. “Identification and characterization of the last two unknown genes, dapC and dapF, in the succinylase branch of the L-lysine biosynthesis of Corynebacterium glutamicum”. J Biotechnol 104 (1-3): 199-211.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610274McHardy, AC, Tauch, Andreas, Rückert, Christian, Pühler, Alfred, and Kalinowski, Jörn. 2003. “Genome-based analysis of biosynthetic aminotransferase genes of Corynebacterium glutamicum”. J Biotechnol 104 (1-3): 229-240.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612324Tauch, Andreas, Schlüter, Andreas, Bischoff, N., Goesmann, Alexander, Meyer, F., and Pühler, Alfred. 2003. “The 79,370-bp conjugative plasmid pB4 consists of an IncP-1 beta backbone loaded with a chromate resistance transposon, the strA-strB streptomycin resistance gene pair, the oxacillinase gene bla(NPS-1), and a tripartite antibiotic efflux system of the resistance-nodulation-division family”. Molecular Genetics and Genomics 268 (5): 570-584.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610254Tauch, Andreas, Pühler, Alfred, Kalinowski, Jörn, and Thierbach, G. 2003. “Plasmids in Corynebacterium glutamicum and their molecular classification by comparative genomics”. JOURNAL OF BIOTECHNOLOGY 104 (1-3): 27-40.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609339Hüser, Andrea T., Becker, Anke, Brune, Iris, Dondrup, Michael, Kalinowski, Jörn, Plassmeier, Jens, Pühler, Alfred, Wiegräbe, I., and Tauch, Andreas. 2003. “Development of a Corynebacterium glutamicum DNA microarray and validation by genome-wide expression profiling during growth with propionate as carbon source”. JOURNAL OF BIOTECHNOLOGY 106 (2-3): 269-286.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1895035Kalinowski, Jörn, Bathe, B., Bartels, D., Bischoff, N., Bott, M., Burkovski, A., Dusch, N., et al. 2003. “The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins”. Journal of Biotechnology 104 (1-3): 5-25.
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613421Tauch, Andreas, Götker, Susanne, Pühler, Alfred, Kalinowski, Jörn, and Thierbach, Georg. 2002. “The 27.8-kb R-plasmid pTET3 from Corynebacterium glutamicum encodes the aminoglycoside adenyltransferase gene cassette aadA9 and the regulated tetracycline efflux system Tet 33 flanked by active copies of the widespread insertion sequence IS6100”. Plasmid 48 (2): 117-129.
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613598Tauch, Andreas, Kirchner, O, Löffler, B, Götker, S, Pühler, Alfred, and Kalinowski, Jörn. 2002. “Efficient electrotransformation of Corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1”. CURRENT MICROBIOLOGY 45 (5): 362-367.
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613526Tauch, Andreas, Götker, S, Pühler, Alfred, Kalinowski, Jörn, and Thierbach, G. 2002. “The alanine racemase gene alr is an alternative to antibiotic resistance genes in cloning systems for industrial Corynebacterium glutamicum strains”. JOURNAL OF BIOTECHNOLOGY 99 (1): 79-91.
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1614276Tauch, Andreas, Schneiker-Bekel, Susanne, Selbitschka, Werner, Pühler, Alfred, van Overbeek, LS, Smalla, K, Thomas, CM, et al. 2002. “The complete nucleotide sequence and environmental distribution of the cryptic, conjugative, broad-host-range plasmid pIPO2 isolated from bacteria of the wheat rhizosphere”. MICROBIOLOGY-SGM 148 (Pt 6): 1637-1653.
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1614833Tauch, Andreas, Homann, I, Mormann, S, Rüberg, Silvia, Billault, A, Bathe, B, Brand, S, et al. 2002. “Strategy to sequence the genome of Corynebacterium glutamicum ATCC 13032: use of a cosmid and a bacterial artificial chromosome library”. JOURNAL OF BIOTECHNOLOGY 95 (1): 25-38.
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1617736Wehmeier, L, Brockmann-Gretza, O, Pisabarro, A, Tauch, Andreas, Pühler, Alfred, Martin, JF, and Kalinowski, Jörn. 2001. “A Corynebacterium glutamicum mutant with a defined deletion within the rpIK gene is impaired in (p)ppGpp accumulation upon amino acid starvation”. Microbiology 147: 691-700.
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1620384Tauch, Andreas, Krieft, S, Kalinowski, Jörn, and Pühler, Alfred. 2000. “The 51,409-bp R-plasmid pTP10 from the multiresistant clinical isolate Corynebacterium striatum M82B is composed of DNA segments initially identified in soil bacteria and in plant, animal, and human pathogens”. MOLECULAR AND GENERAL GENETICS 263 (1): 1-11.
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1618501Tauch, Andreas, Pühler, Alfred, Kalinowski, Jörn, and Thierbach, G. 2000. “TetZ, a new tetracycline resistance determinant discovered in gram-positive bacteria, shows high homology to gram-negative regulated efflux systems”. PLASMID 44 (3): 285-291.
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1623329Tauch, Andreas, Krieft, S, Pühler, Alfred, and Kalinowski, Jörn. 1999. “The tetAB genes of the Corynebacterium striatum R-plasmid pTP10 encode an ABC transporter and confer tetracycline, oxytetracycline and oxacillin resistance in Corynebacterium glutamicum”. FEMS Microbiol Lett 173 (1): 203-209.
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1624721Tauch, Andreas, Zheng, ZX, Pühler, Alfred, and Kalinowski, Jörn. 1998. “Corynebacterium striatum chloramphenicol resistance transposon Tn5564: Genetic organization and transposition in Corynebacterium glutamicum”. Plasmid 40 (2): 126-139.
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1626635Schäfer, A, Tauch, Andreas, Droste, N, Pühler, Alfred, and Kalinowski, Jörn. 1997. “The Corynebacterium glutamicum cglIM gene encoding a 5-cytosine methyltransferase enzyme confers a specific DNA methylation pattern in an McrBC-deficient Escherichia coli strain”. Gene 203 (2): 95-101.
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1640693Tauch, Andreas, Kassing, F, Kalinowski, Jörn, and Pühler, Alfred. 1995. “The erythromycin resistance gene of the Corynebacterium xerosis R-plasmid pTP10 also carrying chloramphenicol, kanamycin, and tetracycline resistances is capable of transposition in Corynebacterium glutamicum”. PLASMID 33 (3): 168-179.
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1639972Tauch, Andreas, KASSING, F, Kalinowski, Jörn, and Pühler, Alfred. 1995. “The Corynebacterium xerosis composite transposon Tn5432 consists of two identical insertion sequences, designated IS1249, flanking the erythromycin resistance gene ermCX”. Plasmid 34 (2): 119-131.
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1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1642272Tauch, Andreas, Kirchner, O, Wehmeier, L, Kalinowski, Jörn, and Pühler, Alfred. 1994. “Corynebacterium glutamicum DNA is subjected to methylation-restriction in Escherichia coli”. FEMS MICROBIOLOGY LETTERS 123 (3): 343-347.
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1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1643046SCHAEFER, A, Tauch, Andreas, JAEGER, W, Kalinowski, Jörn, THIERBACH, G, and Pühler, Alfred. 1994. “Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum”. Gene 145 (1): 69-73.