24 Publikationen

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  • [24]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694652
    Bonte, A., Neuweger, H., Goesmann, A., Thonar, C., Mäder, P., Langenkämper, G., Niehaus, K.: Metabolite profiling on wheat grain to enable a distinction of samples from organic and conventional farming systems. Journal of the science of food and agriculture. 94, 2605-2612 (2014).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [23]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2699819
    Schatschneider, S., Huber, C., Neuweger, H., Watt, T., Pühler, A., Eisenreich, W., Wittmann, C., Niehaus, K., Vorhölter, F.-J.: Metabolic flux pattern of glucose utilization by Xanthomonas campestris pv. campestris: prevalent role of the Entner-Doudoroff pathway and minor fluxes through the pentose phosphate pathway and glycolysis. Molecular BioSystems. 10, 2663-2676 (2014).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [22]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517239 OA
    Hoffmann, N., Keck, M., Neuweger, H., Wilhelm, M., Högy, P., Niehaus, K., Stoye, J.: Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets. BMC Bioinformatics. 13, : 21 (2012).
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [21]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500990
    Rose, M.T., Rose, T.J., Pariasca-Tanaka, J., Yoshihashi, T., Neuweger, H., Goesmann, A., Frei, M., Wissuwa, M.: Root metabolic response of rice (Oryza sativa L.) genotypes with contrasting tolerance to zinc deficiency and bicarbonate excess. Planta. 236, 959-973 (2012).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [20]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2405255
    Persicke, M., Rückert, C., Plassmeier, J., Stutz, L., Kessler, N., Kalinowski, J., Goesmann, A., Neuweger, H.: MSEA: metabolite set enrichment analysis in the MeltDB metabolomics software platform: metabolic profiling of Corynebacterium glutamicum as an example. Metabolomics. 8, 310-322 (2012).
    PUB | DOI | WoS
     
  • [19]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944855
    Persicke, M., Plassmeier, J., Neuweger, H., Rückert, C., Pühler, A., Kalinowski, J.: Erratum to “Size exclusion chromatography—An improved method to harvest Corynebacterium glutamicum cells for the analysis of cytosolic metabolites” [J. Biotechnol. 154 (2–3) (2011) 171–178]. Journal of Biotechnology. 155, 266-267 (2011).
    PUB | DOI | WoS
     
  • [18]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289494
    Persicke, M., Plassmeier, J., Neuweger, H., Rückert, C., Pühler, A., Kalinowski, J.: Size exclusion chromatography-An improved method to harvest Corynebacterium glutamicum cells for the analysis of cytosolic metabolites. Journal of Biotechnology. 154, 171-178 (2011).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [17]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445
    Schneider, J., Blom, J., Jaenicke, S., Linke, B., Brinkrolf, K., Neuweger, H., Tauch, A., Goesmann, A.: RAPYD - Rapid Annotation Platform for Yeast Data. Journal of Biotechnology. 155, 118-126 (2011).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [16]
    2011 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2017892
    Schneiker-Bekel, S., Wibberg, D., Bekel, T., Blom, J., Linke, B., Neuweger, H., Stiens, M., Vorhölter, F.-J., Weidner, S., Goesmann, A., Pühler, A., Schlüter, A.: The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome. Journal of Biotechnology. 155, 20-33 (In Press).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [15]
    2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929692
    Schneider, J., Vorhölter, F.-J., Trost, E., Blom, J., Musa, Y.R., Neuweger, H., Niehaus, K., Schatschneider, S., Tauch, A., Goesmann, A.: CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks. Genetics and Molecular Research. 9, 1660-1672 (2010).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [14]
    2010 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1894907
    Mittard-Runte, V., Bekel, T., Blom, J., Dondrup, M., Henckel, K., Jaenicke, S., Krause, L., Linke, B., Neuweger, H., Schneiker-Bekel, S., Goesmann, A.: Practical Guide: Genomic Techniques and How to Apply Them to Marine Questions. In: Cock, J.M., Tessmar-Raible, K., Boyen, C., and Viard, F. (eds.) Introduction to Marine Genomics (Advances in Marine Genomics). 1, p. 315-396. Springer Netherlands, Netherlands (2010).
    PUB | DOI
     
  • [13]
    2009 | Bielefelder E-Dissertation | PUB-ID: 2301318 OA
    Neuweger, H.: MeltDB : a software platform for the analysis and integration of metabolomics experiment data. Bielefeld University, Bielefeld (Germany) (2009).
    PUB | PDF
     
  • [12]
    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783813 OA
    Neuweger, H., Persicke, M., Albaum, S., Bekel, T., Dondrup, M., Hüser, A.T., Winnebald, J., Schneider, J., Kalinowski, J., Goesmann, A.: Visualizing post genomics data-sets on customized pathway maps by ProMeTra – aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example. BMC Systems Biology. 3, : 82 (2009).
    PUB | PDF | DOI | PubMed | Europe PMC
     
  • [11]
    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635321 OA
    Dondrup, M., Albaum, S., Griebel, T., Henckel, K., Jünemann, S., Kahlke, T., Kleindt, C.K., Kuester, H., Linke, B., Mertens, D., Mittard-Runte, V., Neuweger, H., Runte, K.J., Tauch, A., Tille, F., Pühler, A., Goesmann, A.: EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data. BMC Bioinformatics. 10, : 50 (2009).
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [10]
    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589531
    Albaum, S., Neuweger, H., Fraenzel, B., Lange, S., Mertens, D., Troetschel, C., Wolters, D., Kalinowski, J., Nattkemper, T.W., Goesmann, A.: Qupe-a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments. Bioinformatics. 25, 3128-3134 (2009).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [9]
    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634447
    Bekel, T., Henckel, K., Küster, H., Meyer, F., Mittard-Runte, V., Neuweger, H., Paarmann, D., Rupp, O., Zakrzewski, M., Pühler, A., Stoye, J., Goesmann, A.: The Sequence Analysis and Management System - SAMS-2.0: Data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies. Journal of Biotechnology. 140, 3-12 (2009).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [8]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636699
    Neuweger, H., Albaum, S., Dondrup, M., Persicke, M., Watt, T., Niehaus, K., Stoye, J., Goesmann, A.: MeltDB: a software platform for the analysis and integration of metabolomics experiment data. Bioinformatics. 24, 2726-2732 (2008).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [7]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586009
    Krause, L., Diaz, N.N., Edwards, R.A., Gartemann, K.-H., Krömeke, H., Neuweger, H., Pühler, A., Runte, K.J., Schlüter, A., Stoye, J., Szczepanowski, R., Tauch, A., Goesmann, A.: Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor. JOURNAL OF BIOTECHNOLOGY. 136, 91-101 (2008).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [6]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585987
    Schlüter, A., Bekel, T., Diaz, N.N., Dondrup, M., Eichenlaub, R., Gartemann, K.-H., Krahn, I., Krause, L., Kroemeke, H., Kruse, O., Mussgnug, J.H., Neuweger, H., Niehaus, K., Pühler, A., Runte, K.J., Szczepanowski, R., Tauch, A., Tilker, A., Viehöver, P., Goesmann, A.: The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology. Journal of Biotechnology. 136, 77-90 (2008).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [5]
    2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018381
    Albaum, S., Neuweger, H., Lange, S., Mertens, D., Runte, K., Kalinowski, J., Nattkemper, T.W., Goesmann, A.: ProSE - "Software as a Service" for Quantitative Proteomics (Poster abstract). HUPO 7th Annual World Congress. (2008).
    PUB
     
  • [4]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783754 OA
    Neuweger, H., Baumbach, J., Albaum, S., Bekel, T., Dondrup, M., Hüser, A.T., Kalinowski, J., Oehm, S., Pühler, A., Rahmann, S., Weile, J., Goesmann, A.: CoryneCenter: an online resource for the integrated analysis of corynebacterial genome and transcriptome data. BMC Systems Biology. 1, : 55 (2007).
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [3]
    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2382786
    Linke, B., McHardy, A.C., Neuweger, H., Krause, L., Meyer, F.: The REGANOR gene prediction server for prokaryotic genomes and a database of high quality gene predictions for prokaryotes. Applied Bioinformatics. 5, 193-198 (2006).
    PUB | DOI
     
  • [2]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773652 OA
    Overbeek, R., Begley, T., Butler, R.M., Choudhuri, J.V., Chuang, H.-Y., Cohoon, M., Crécy-Lagard, V. de, Diaz, N.N., Disz, T., Edwards, R., Fonstein, M., Frank, E.D., Gerdes, S., Glass, E.M., Goesmann, A., Hanson, A., Iwata-Reuyl, D., Jensen, R., Jamshidi, N., Krause, L., Kubal, M., Larsen, N., Linke, B., McHardy, A.C., Meyer, F., Neuweger, H., Olsen, G., Olson, R., Osterman, A., Portnoy, V., Pusch, G.D., Rodionov, D.A., Rückert, C., Steiner, J., Stevens, R., Thiele, I., Vassieva, O., Ye, Y., Zagnitko, O., Vonstein, V.: The subsystems approach to genome annotation and its use in the Project to Annotate 1000 Genomes. Nucleic Acids Research. 33, 5691-5702 (2005).
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [1]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773644 OA
    Goesmann, A., Linke, B., Bartels, D., Dondrup, M., Krause, L., Neuweger, H., Oehm, S., Paczian, T., Wilke, A., Meyer, F.: BRIGEP - the BRIDGE-based genome-transcriptome-proteome browser. Nucleic Acids Research. 33, W710-W716 (2005).
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     

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