158 Publikationen

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  • [158]
    2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2986391 OA
    Höhn D, Masello J, Kümmel MN, Griep S, Goesmann A, Quillfeldt P. Nestling Diet of Two Sympatric Insectivorous Passerines in Different Habitats—A Metabarcoding Study. Birds. 2024;5(1):67-89.
    PUB | PDF | DOI
     
  • [157]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957996 OA
    Wibberg D, Genzel F, Verwaaijen B, et al. Genome Analyses of the Less Aggressive Rhizoctonia solani AG1-IB Isolates 1/2/21 and O8/2 Compared to the Reference AG1-IB Isolate 7/3/14. Journal of Fungi. 2021;7(10): 832.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [156]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919320
    Cardoso SD, Goncalves D, Goesmann A, Canario AVM, Oliveira RF. Temporal variation in brain transcriptome is associated with the expression of female mimicry as a sequential male alternative reproductive tactic in fish. MOLECULAR ECOLOGY. 2018;27(3):789-803.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [155]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916526
    Golyshina OV, Tran H, Reva ON, et al. Metabolic and evolutionary patterns in the extremely acidophilic archaeon Ferroplasma acidiphilum Y-T. SCIENTIFIC REPORTS. 2017;7(1): 3682.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [154]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904976 OA
    Blifernez-Klassen O, Wibberg D, Winkler A, et al. Complete Chloroplast and Mitochondrial Genome Sequences of the Hydrocarbon Oil-Producing Green MicroalgaBotryococcus brauniiRace B (Showa). Genome Announcements. 2016;4(3): e00524-16.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [153]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2731279
    Huja S, Oren Y, Trost E, et al. Genomic Avenue to Avian Colisepticemia. mBio. 2015;6(1): e01681-14.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [152]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2761035
    Arnold M, Wibberg D, Blom J, et al. Draft Genome Sequence of Pseudomonas aeruginosa Strain WS136, a Highly Cytotoxic ExoS-Positive Wound Isolate Recovered from Pyoderma Gangrenosum. Genome announcements. 2015;3(4): e00680-15.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [151]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900131 OA
    Pauli M, Chakarov N, Rupp O, et al. De novo assembly of the dual transcriptomes of a polymorphic raptor species and its malarial parasite. BMC Genomics. 2015;16(1): 1038.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [150]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782605
    Rupp O, Brinkrolf K, Buerth C, et al. The structure of the Cyberlindnera jadinii genome and its relation to Candida utilis analyzed by the occurrence of single nucleotide polymorphisms. Journal of Biotechnology. 2015;211:20-30.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [149]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2730423
    Chakarov N, Linke B, Boerner M, Goesmann A, Krüger O, Hoffman J. Apparent vector-mediated parent-to-offspring transmission in an avian malaria-like parasite. Molecular Ecology. 2015;24(6):1355-1363.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [148]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2651944
    Tielen P, Wibberg D, Blom J, et al. Genome Sequence of the Small-Colony Variant Pseudomonas aeruginosa MH27, Isolated from a Chronic Urethral Catheter Infection. Genome announcements. 2014;2(1).
    PUB | DOI | PubMed | Europe PMC
     
  • [147]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643946
    Dohm JC, Minoche AE, Holtgräwe D, et al. The genome of the recently domesticated crop plant sugar beet (Beta vulgaris). Nature. 2014;505(7484):546-549.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [146]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2690174
    Christiansen G, Goesmann A, Kurmayer R. Elucidation of insertion elements carried on plasmids and in vitro construction of shuttle vectors from the toxic cyanobacterium planktothrix. Applied and environmental microbiology. 2014;80(16):4887-4897.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [145]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694652
    Bonte A, Neuweger H, Goesmann A, et al. Metabolite profiling on wheat grain to enable a distinction of samples from organic and conventional farming systems. Journal of the science of food and agriculture. 2014;94(13):2605-2612.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [144]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676552
    Becker J, Timmermann C, Rupp O, et al. Transcriptome analyses of CHO cells with the next-generation microarray CHO41K: Development and validation by analysing the influence of the growth stimulating substance IGF-1 substitute LongR(3.). Journal of biotechnology. 2014;178:23-31.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [143]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2656773
    Rupp O, Becker J, Brinkrolf K, et al. Construction of a Public CHO Cell Line Transcript Database Using Versatile Bioinformatics Analysis Pipelines. PLoS ONE. 2014;9(1): e85568.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [142]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694682
    Wegmann U, Louis P, Goesmann A, Henrissat B, Duncan SH, Flint HJ. Complete genome of a new Firmicutes species belonging to the dominant human colonic microbiota ('Ruminococcus bicirculans') reveals two chromosomes and a selective capacity to utilize plant glucans. Environmental microbiology. 2014;16(9):2879-2890.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [141]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2691732
    Klippel B, Sahm K, Basner A, et al. Carbohydrate-active enzymes identified by metagenomic analysis of deep-sea sediment bacteria. Extremophiles. 2014;18(5):853-863.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [140]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2664976
    Rückert C, Szczepanowski R, Albersmeier A, et al. Complete Genome Sequence of the Actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycin. Journal of biotechnology. 2014;178:41-42.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [139]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2554079
    Kuenne C, Billion A, Mraheil MA, et al. Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome. BMC Genomics. 2013;14(1): 47.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [138]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2560837
    Fritzenwanker M, Kuenne C, Billion A, et al. Complete Genome Sequence of the Probiotic Enterococcus faecalis Symbioflor 1 Clone DSM 16431. Genome Announcements. 2013;1(1):e00165-12.
    PUB | DOI | PubMed | Europe PMC
     
  • [137]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2564601
    Riedel T, Gómez-Consarnau L, Tomasch J, et al. Genomics and Physiology of a Marine Flavobacterium Encoding a Proteorhodopsin and a Xanthorhodopsin-Like Protein. PLOS ONE. 2013;8(3): e57487.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [136]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529309
    Bolzan de Campos S, Youn J-W, Farina R, et al. Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (Brassica napus L. var oleifera) Evaluated through Next-Generation Sequencing. Microbial Ecology. 2013;65(3):593-601.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [135]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2549908
    Wibberg D, Jelonek L, Rupp O, et al. Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14. Journal of Biotechnology. 2013;167(2):142-155.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [134]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2606943
    Vences M, Hauswaldt S, Steinfartz S, et al. Radically different phylogeographies and patterns of genetic variation in two European brown frogs, genus Rana. Molecular phylogenetics and evolution. 2013;68(3):657-670.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [133]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2602756
    Smits THM, Rezzonico F, López MM, et al. Phylogenetic position and virulence apparatus of the pear flower necrosis pathogen Erwinia piriflorinigrans CFBP 5888(T) as assessed by comparative genomics. Systematic and applied microbiology. 2013;36(7):449-456.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [132]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641228
    Jünemann S, Sedlazeck FJ, Prior K, et al. Corrigendum: Updating benchtop sequencing performance comparison. Nature biotechnology. 2013;31(12):1148.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [131]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2632946
    Köhler KAK, Rückert C, Schatschneider S, et al. Complete genome sequence of Pseudomonas sp. strain VLB120 a solvent tolerant, styrene degrading bacterium, isolated from forest soil. Journal of Biotechnology. 2013;168(4):729-730.
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  • [130]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2622238
    Barbe S, Llop P, Blom J, et al. Complete sequence of Erwinia piriflorinigrans plasmids pEPIR37 and pEPIR5 and role of pEPIR37 in pathogen virulence. Plant Pathology. 2013;62(4):786-798.
    PUB | DOI | WoS
     
  • [129]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2615581
    Brinkrolf K, Rupp O, Laux H, et al. Chinese hamster genome sequenced from sorted chromosomes. Nature Biotechnology. 2013;31(8):694-695.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [128]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2576080
    Toepel J, Illmer-Kephalides M, Jaenicke S, et al. New insights into Chlamydomonas reinhardtii hydrogen production processes by combined microarray/RNA-seq transcriptomics. Plant Biotechnology Journal. 2013;11(6):717-733.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [127]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2631956
    Rückert C, Szczepanowski R, Albersmeier A, et al. Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids. Journal of Biotechnology. 2013;168(4):739-740.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [126]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2566922
    Jünemann S, Sedlazeck FJ, Prior K, et al. Updating benchtop sequencing performance comparison. Nature Biotechnology. 2013;31(4):294-296.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [125]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2557938
    Mann RA, Smits THM, Bühlmann A, et al. Comparative Genomics of 12 Strains of Erwinia amylovora Identifies a Pan-Genome with a Large Conserved Core. PLOS ONE. 2013;8(2): e55644.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [124]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645668 OA
    Bogen C, Al-Dilaimi A, Albersmeier A, et al. Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production. BMC Genomics. 2013;14(1): 926.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [123]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2610129
    Kessler N, Bonte A, Langenkämper G, Niehaus K, Goesmann A, Nattkemper TW. MeltDB 2.0 - Advances of the metabolomics software system. Bioinformatics. 2013;29(19):2452-2459.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [122]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529202
    Zakrzewski M, Bekel T, Ander C, et al. MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets. Journal of Biotechnology. 2013;167(2):156-165.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [121]
    2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2538625
    Bonte A, Kessler N, Nattkemper TW, et al. Einsatz von Protein- und Metabolit-Profiling-Methoden zur Unterscheidung von ökologischem und konventionellem Weizen. Presented at the 12. Wissenschaftstagung Ökologischer Landbau „Ideal und Wirklichkeit – Perspektiven Ökologischer Landbewirtschaftung“, Bonn, Germany.
    PUB
     
  • [120]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517230
    Jünemann S, Prior K, Szczepanowski R, et al. Bacterial Community Shift in Treated Periodontitis Patients Revealed by Ion Torrent 16S rRNA Gene Amplicon Sequencing. PLoS ONE. 2012;7(8): e41606.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [119]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500959
    Kahlke T, Goesmann A, Hjerde E, Willassen NP, Haugen P. Unique core genomes of the bacterial family vibrionaceae: Insights into niche adaptation and speciation. BMC genomics. 2012;13(1): 179.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [118]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500966
    Hain T, Ghai R, Billion A, et al. Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes. BMC Genomics. 2012;13(1): 144.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [117]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2484618
    Zakrzewski M, Goesmann A, Jaenicke S, et al. Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing. Journal of Biotechnology. 2012;158(4):248-258.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [116]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500990
    Rose MT, Rose TJ, Pariasca-Tanaka J, et al. Root metabolic response of rice (Oryza sativa L.) genotypes with contrasting tolerance to zinc deficiency and bicarbonate excess. Planta. 2012;236(4):959-973.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [115]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490949
    Zschuttig A, Zimmermann K, Blom J, Goesmann A, Pohlmann C, Gunzer F. Identification and Characterization of Microcin S, a New Antibacterial Peptide Produced by Probiotic Escherichia coli G3/10. PLoS ONE. 2012;7(3): e33351.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [114]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471858
    Ausec L, Zakrzewski M, Goesmann A, Schlüter A, Mandic-Mulec I. Correction: bioinformatic analysis reveals high diversity of bacterial genes for laccase-like enzymes. PLoS ONE. 2012;7(1).
    PUB | DOI | PubMed | Europe PMC
     
  • [113]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490535
    Heinl S, Wibberg D, Eikmeyer FG, et al. Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage. Journal of Biotechnology. 2012;161(2):153-166.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [112]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471681
    Rademacher A, Zakrzewski M, Schlüter A, et al. Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing. FEMS Microbiology Ecology. 2012;79(3):785-799.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [111]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513256
    Filippini M, Qi W, Blom J, Goesmann A, Smits THM, Bagheri HC. Genome Sequence of Fibrella aestuarina BUZ 2T, a Filamentous Marine Bacterium. Journal of bacteriology. 2012;194(13):3555.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [110]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498232
    Trötschel C, Albaum S, Wolff D, et al. Protein turnover quantification in a multi-labeling approach - from data calculation to evaluation. Molecular & Cellular Proteomics. 2012;11(8):512-526.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [109]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2487853
    Brankatschk K, Blom J, Goesmann A, Smits THM, Duffy B. Comparative genomic analysis of Salmonella enterica subsp. enterica serovar Weltevreden foodborne strains with other serovars. International journal of food microbiology. 2012;155(3):247-256.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [108]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2474002
    Schneider J, Rupp O, Trost E, et al. Genome sequence of Wickerhamomyces anomalus DSM 6766 reveals genetic basis of biotechnologically important antimicrobial activities. FEMS Yeast Research. 2012;12(3):382-386.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [107]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2478526
    Hackl M, Jadhav V, Jakobi T, et al. Computational identification of microRNA gene loci and precursor microRNA sequences in CHO cell lines. Journal of Biotechnology. 2012;158(3):151-155.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [106]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2405255
    Persicke M, Rückert C, Plassmeier J, et al. MSEA: metabolite set enrichment analysis in the MeltDB metabolomics software platform: metabolic profiling of Corynebacterium glutamicum as an example. Metabolomics. 2012;8(2):310-322.
    PUB | DOI | WoS
     
  • [105]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2544774
    Schneider J, Andrea H, Blom J, et al. Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10. Eukaryotic Cell. 2012;11(12):1582-1583.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [104]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500937
    Rezzonico F, Braun-Kiewnick A, Mann RA, et al. Lipopolysaccharide biosynthesis genes discriminate between Rubus- and Spiraeoideae-infective genotypes of Erwinia amylovora. Molecular plant pathology. 2012;13(8):975-984.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [103]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2501081
    De Maayer P, Chan WY, Rezzonico F, et al. Complete genome sequence of clinical isolate Pantoea ananatis LMG 5342. Journal of Bacteriology. 2012;194(6):1615-1616.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [102]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529610
    Schork S, Schlüter A, Blom J, et al. Genome Sequence of a Neisseria meningitidis Capsule Null Locus Strain from the Clonal Complex of Sequence Type 198. Journal of Bacteriology. 2012;194(18):5144-5145.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [101]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526281
    Zischka M, Kuenne C, Blom J, et al. Complete Genome Sequence of the Porcine Isolate Enterococcus faecalis D32. Journal of Bacteriology. 2012;194(19):5490-5491.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [100]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500946
    Mann RA, Blom J, Bühlmann A, et al. Comparative analysis of the Hrp pathogenicity island of Rubus- and Spiraeoideae-infecting Erwinia amylovora strains identifies the IT region as a remnant of an integrative conjugative element. Gene. 2012;504(1):6-12.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [99]
    2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2453768
    Becker J, Timmermann C, Jakobi T, et al. Next-generation sequencing of the CHO cell transcriptome. BMC Proceedings. 2011;5(Suppl. 8):P6.
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  • [98]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093398
    Brankatschk K, Blom J, Goesmann A, Smits THM, Duffy B. Genome of a European Fresh-Vegetable Food Safety Outbreak Strain of Salmonella enterica subsp enterica Serovar Weltevreden. Journal of Bacteriology. 2011;193(8):2066.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [97]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003276
    Jaenicke S, Ander C, Bekel T, et al. Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing. PLoS ONE. 2011;6(1): e14519.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [96]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2411830
    Ausec L, Zakrzewski M, Goesmann A, Schlüter A, Mandic-Mulec I. Bioinformatic analysis reveals high diversity of bacterial genes for laccase-like enzymes. PLoS ONE. 2011;6(10): e25724.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [95]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300063 OA
    Albaum S, Hahne H, Otto A, et al. A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study. Proteome Science. 2011;9(1): 30.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [94]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2451800 OA
    Toepel J, Albaum S, Arvidsson S, et al. Construction and evaluation of a whole genome microarray of Chlamydomonas reinhardtii. BMC Genomics. 2011;12(1): 579.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [93]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375634
    Pothier JF, Vorhölter F-J, Blom J, et al. The ubiquitous plasmid pXap41 in the invasive phytopathogen Xanthomonas arboricola pv. pruni: complete sequence and comparative genomic analysis. FEMS Microbiology Letters. 2011;323(1):52-60.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [92]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354731
    Wibberg D, Blom J, Jaenicke S, et al. Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid. Journal of Biotechnology. 2011;155(1):50-62.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [91]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317371
    Küberl A, Schneider J, Thallinger GG, et al. High-quality genome sequence of Pichia pastoris CBS7435. Journal of Biotechnology. 2011;154(4):312-320.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [90]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396576
    Becker J, Hackel M, Jakobi T, et al. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Journal of Biotechnology. 2011;156(3):227-235.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1868701
    Tauch A, Trost E, Bekel T, Goesmann A, Ludewig U, Pühler A. Ultrafast de novo sequencing of Corynebacterium urealyticum using the Genome Sequencer 20 System. Biochemica. 2006;4:4-6.
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  • [19]
    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597316
    Hain T, Steinweg C, Kuenne CT, et al. Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes. Journal of Bacteriology. 2006;188(23):8299-8302.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [18]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773302 OA
    Bartels D, Kespohl S, Albaum S, et al. BACCardI - a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison. Bioinformatics. 2005;21(7):853-859.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [17]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601712
    Thieme F, Koebnik R, Bekel T, et al. Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence. JOURNAL OF BACTERIOLOGY. 2005;187(21):7254-7266.
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  • [16]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773652 OA
    Overbeek R, Begley T, Butler RM, et al. The subsystems approach to genome annotation and its use in the Project to Annotate 1000 Genomes. Nucleic Acids Research. 2005;33(17):5691-5702.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [15]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603317
    Tauch A, Kaiser O, Hain T, et al. Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora. Journal of Bacteriology. 2005;187(13):4671-4682.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [14]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773644 OA
    Goesmann A, Linke B, Bartels D, et al. BRIGEP - the BRIDGE-based genome-transcriptome-proteome browser. Nucleic Acids Research. 2005;33(Web Server):W710-W716.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [13]
    2004 | Bielefelder E-Dissertation | PUB-ID: 2301314 OA
    Goesmann A. BRIDGE : a bioinformatics software platform for the integration of heterogeneous data from genomic explorations. Bielefeld (Germany): Bielefeld University; 2004.
    PUB | PDF
     
  • [12]
    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608756
    Westberg J, Persson A, Holmberg A, et al. The genome sequence of Mycoplasma mycoides subsp mycoides SC type strain PG1(T), the causative agent of contagious bovine pleuropneumonia (CBPP). GENOME RESEARCH. 2004;14(2):221-227.
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  • [11]
    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608953
    Rendulic S, Jagtap P, Rosinus A, et al. A predator unmasked: Life cycle of Bdellovibrio bacteriovorus from a genomic perspective. SCIENCE. 2004;303(5658):689-692.
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  • [10]
    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605656
    Szczepanowski R, Krahn I, Linke B, Goesmann A, Pühler A, Schlüter A. Antibiotic multiresistance plasmid pRSB101 isolated from a wastewater treatment plant is related to plasmids residing in phytopathogenic bacteria and carries eight different resistance determinants including a multidrug transport system. Microbiology. 2004;150(11):3613-3630.
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  • [9]
    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607424
    McHardy AC, Goesmann A, Pühler A, Meyer F. Development of joint application strategies for two microbial gene finders. BIOINFORMATICS. 2004;20(10):1622-1631.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [8]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609260
    Dondrup M, Goesmann A, Bartels D, et al. EMMA: a platform for consistent storage and efficient analysis of microarray data. JOURNAL OF BIOTECHNOLOGY. 2003;106(2-3):135-146.
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  • [7]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609286
    Goesmann A, Linke B, Rupp O, et al. Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology. JOURNAL OF BIOTECHNOLOGY. 2003;106(2-3):157-167.
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  • [6]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609251
    Kaiser O, Bartels D, Bekel T, et al. Whole genome shotgun sequencing guided-by bioinformatics pipelines - An optimized approach for an established technique. JOURNAL OF BIOTECHNOLOGY. 2003;106(2-3):121-133.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [5]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609272
    Wilke A, Rückert C, Bartels D, et al. Bioinformatics support for high-throughput proteomics. JOURNAL OF BIOTECHNOLOGY. 2003;106(2-3):147-156.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [4]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612324 OA
    Tauch A, Schlüter A, Bischoff N, Goesmann A, Meyer F, Pühler A. The 79,370-bp conjugative plasmid pB4 consists of an IncP-1 beta backbone loaded with a chromate resistance transposon, the strA-strB streptomycin resistance gene pair, the oxacillinase gene bla(NPS-1), and a tripartite antibiotic efflux system of the resistance-nodulation-division family. Molecular Genetics and Genomics. 2003;268(5):570-584.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [3]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773880 OA
    Meyer F, Goesmann A, McHardy AC, et al. GenDB - an open source genome annotation system for prokaryote genomes. Nucleic Acids Research. 2003;31(8):2187-2195.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [2]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1895035
    Kalinowski J, Bathe B, Bartels D, et al. The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins. Journal of Biotechnology. 2003;104(1-3):5-25.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [1]
    2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1615366
    Goesmann A, Haubrock M, Meyer F, Kalinowski J, Giegerich R. PathFinder: reconstruction and dynamic visualization of metabolic pathways. BIOINFORMATICS. 2002;18(1):124-129.
    PUB | DOI | WoS | PubMed | Europe PMC
     

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