33 Publikationen

Alle markieren

  • [33]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2730423
    Chakarov, Nayden, Linke, Burkhard, Boerner, Martina, Goesmann, Alexander, Krüger, Oliver, and Hoffman, Joseph. “Apparent vector-mediated parent-to-offspring transmission in an avian malaria-like parasite”. Molecular Ecology 24.6 (2015): 1355-1363.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [32]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2615581
    Brinkrolf, Karina, Rupp, Oliver, Laux, Holger, Kollin, Florian, Ernst, Wolfgang, Linke, Burkhard, Kofler, Rudolf, Romand, Sandrine, Hesse, Friedemann, Budach, Wolfgang E, Galosy, Sybille, Müller, Dethardt, Noll, Thomas, Wienberg, Johannes, Jostock, Thomas, Leonard, Mark, Grillari, Johannes, Tauch, Andreas, Goesmann, Alexander, Helk, Bernhard, Mott, John E, Pühler, Alfred, and Borth, Nicole. “Chinese hamster genome sequenced from sorted chromosomes”. Nature Biotechnology 31.8 (2013): 694-695.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [31]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490535
    Heinl, Stefan, Wibberg, Daniel, Eikmeyer, Felix Gregor, Szczepanowski, Rafael, Blom, Jochen, Linke, Burkhard, Goesmann, Alexander, Grabherr, Reingard, Schwab, Helmut, Pühler, Alfred, and Schlüter, Andreas. “Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage”. Journal of Biotechnology 161.2 (2012): 153-166.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [30]
    2012 | Bielefelder E-Dissertation | PUB-ID: 2472937 OA
    Linke, Burkhard. Conveyor - a workflow engine for bioinformatics analyses. Bielefeld: Universität, 2012.
    PUB | PDF
     
  • [29]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526281
    Zischka, M., Kuenne, C., Blom, Jochen, Dabrowski, P. W., Linke, Burkhard, Hain, T., Nitsche, A., Goesmann, Alexander, Larsen, J., Jensen, L. B., Witte, W., and Werner, G. “Complete Genome Sequence of the Porcine Isolate Enterococcus faecalis D32”. Journal of Bacteriology 194.19 (2012): 5490-5491.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [28]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445
    Schneider, Jessica, Blom, Jochen, Jaenicke, Sebastian, Linke, Burkhard, Brinkrolf, Karina, Neuweger, Heiko, Tauch, Andreas, and Goesmann, Alexander. “RAPYD - Rapid Annotation Platform for Yeast Data”. Journal of Biotechnology 155.1 (2011): 118-126.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [27]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2290032
    Joseph, Biju, Schwarz, Roland F., Linke, Burkhard, Blom, Jochen, Becker, Anke, Claus, Heike, Goesmann, Alexander, Frosch, Matthias, Mueller, Tobias, Vogel, Ulrich, and Schoen, Christoph. “Virulence Evolution of the Human Pathogen Neisseria meningitidis by Recombination in the Core and Accessory Genome”. PLoS ONE 6.4 (2011): e18441.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [26]
    2011 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2017892
    Schneiker-Bekel, Susanne, Wibberg, Daniel, Bekel, Thomas, Blom, Jochen, Linke, Burkhard, Neuweger, Heiko, Stiens, Michael, Vorhölter, Frank-Jörg, Weidner, Stefan, Goesmann, Alexander, Pühler, Alfred, and Schlüter, Andreas. “The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome”. Journal of Biotechnology 155.1 (In Press): 20-33.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [25]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093578
    Linke, Burkhard, Giegerich, Robert, and Goesmann, Alexander. “Conveyor: a workflow engine for bioinformatic analyses”. Bioinformatics 27.7 (2011): 903-911.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [24]
    2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785275 OA
    Trost, Eva, Götker, Susanne, Schneider, Jessica, Schneiker-Bekel, Susanne, Szczepanowski, Rafael, Tilker, Alexandra, Viehöver, Prisca, Arnold, Walter, Bekel, Thomas, Blom, Jochen, Gartemann, Karl-Heinz, Linke, Burkhard, Goesmann, Alexander, Pühler, Alfred, Shukla, Sanjay K., and Tauch, Andreas. “Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion”. BMC Genomics 11.1 (2010): 91.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [23]
    2010 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1894907
    Mittard-Runte, Virginie, Bekel, Thomas, Blom, Jochen, Dondrup, Michael, Henckel, Kolja, Jaenicke, Sebastian, Krause, Lutz, Linke, Burkhard, Neuweger, Heiko, Schneiker-Bekel, Susanne, and Goesmann, Alexander. “Practical Guide: Genomic Techniques and How to Apply Them to Marine Questions”. Introduction to Marine Genomics (Advances in Marine Genomics). Ed. J. Mark Cock, Kristin Tessmar-Raible, Catherine Boyen, and Frédérique Viard. Netherlands: Springer Netherlands, 2010.Vol. 1. 315-396.
    PUB | DOI
     
  • [22]
    2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1930110
    Joseph, Biju, Schneiker-Bekel, Susanne, Schramm-Glueck, Anja, Blom, Jochen, Claus, Heike, Linke, Burkhard, Schwarz, Roland F., Becker, Anke, Goesmann, Alexander, Frosch, Matthias, and Schoen, Christoph. “Comparative Genome Biology of a Serogroup B Carriage and Disease Strain Supports a Polygenic Nature of Meningococcal Virulence”. JOURNAL OF BACTERIOLOGY 192.20 (2010): 5363-5377.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [21]
    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634467
    Becker, Anke, Barnett, Melanie J., Capela, Delphine, Dondrup, Michael, Kamp, Paul-Bertram, Krol, Elizaveta, Linke, Burkhard, Rüberg, Silvia, Runte, Kai, Schroeder, Brenda K., Weidner, Stefan, Yurgel, Svetlana N., Batut, Jacques, Long, Sharon R., Pühler, Alfred, and Goesmann, Alexander. “A portal for rhizobial genomes: RhizoGATE integrates a Sinorhizobium meliloti genome annotation update with postgenome data”. JOURNAL OF BIOTECHNOLOGY 140.1-2 (2009): 45-50.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [20]
    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635321 OA
    Dondrup, Michael, Albaum, Stefan, Griebel, Thasso, Henckel, Kolja, Jünemann, Sebastian, Kahlke, Tim, Kleindt, Christiane Katja, Kuester, Helge, Linke, Burkhard, Mertens, Dominik, Mittard-Runte, Virginie, Neuweger, Heiko, Runte, Kai J., Tauch, Andreas, Tille, Felix, Pühler, Alfred, and Goesmann, Alexander. “EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data”. BMC Bioinformatics 10.1 (2009): 50.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [19]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783292 OA
    Gross, Roy, Guzman, Carlos A., Sebaihia, Mohammed, Martins dos Santos, Vítor A. P., Pieper, Dietmar H., Koebnik, Ralf, Lechner, Melanie, Bartels, Daniela, Buhrmester, Jens, Choudhuri, Jomuna V., Ebensen, Thomas, Gaigalat, Lars, Herrmann, Stefanie, Khachane, Amit N., Larisch, Christof, Link, Stefanie, Linke, Burkhard, Meyer, Folker, Mormann, Sascha, Nakunst, Diana, Rückert, Christian, Schneiker-Bekel, Susanne, Schulze, Kai, Vorhölter, Frank-Jörg, Yevsa, Tetyana, Engle, Jacquelyn T., Goldman, William E., Pühler, Alfred, Göbel, Ulf B., Goesmann, Alexander, Blöcker, Helmut, Kaiser, Olaf, and Martinez-Arias, Rosa. “The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae”. BMC Genomics 9.1 (2008): 449.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [18]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592024
    Vorhölter, Frank-Jörg, Schneiker-Bekel, Susanne, Goesmann, Alexander, Krause, Lutz, Bekel, Thomas, Kaiser, Olaf, Linke, Burkhard, Patschkowski, Thomas, Rückert, Christian, Schmid, Joachim, Sidhu, Vishaldeep Kaur, Sieber, Volker, Tauch, Andreas, Watt, Steven Alexander, Weisshaar, Bernd, Becker, Anke, Niehaus, Karsten, and Pühler, Alfred. “The genome of Xanthomonas campestris pv. campestris B 100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis”. Journal of Biotechnology 134.1-2 (2008): 33-45.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [17]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592257
    Schoen, Christoph, Blom, Jochen, Claus, Heike, Schramm-Glueck, Anja, Brandt, Petra, Mueller, Tobias, Goesmann, Alexander, Joseph, Biju, Konietzny, Sebastian, Kurzai, Oliver, Schmitt, Corinna, Friedrich, Torben, Linke, Burkhard, Vogel, Ulrich, and Frosch, Matthias. “Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis”. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 105.9 (2008): 3473-3478.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [16]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1631327
    Schneiker-Bekel, Susanne, Perlova, Olena, Kaiser, Olaf, Gerth, Klaus, Alici, Aysel, Altmeyer, Matthias O., Bartels, Daniela, Bekel, Thomas, Beyer, Stefan, Bode, Edna, Bode, Helge B., Bolten, Christoph J., Choudhuri, Jomuna V., Doss, Sabrina, Elnakady, Yasser A., Frank, Bettina, Gaigalat, Lars, Goesmann, Alexander, Groeger, Carolin, Gross, Frank, Jelsbak, Lars, Jelsbak, Lotte, Kalinowski, Jörn, Kegler, Carsten, Knauber, Tina, Konietzny, Sebastian, Kopp, Maren, Krause, Lutz, Krug, Daniel, Linke, Burkhard, Mahmud, Taifo, Martinez-Arias, Rosa, McHardy, Alice C., Merai, Michelle, Meyer, Folker, Mormann, Sascha, Munoz-Dorado, Jose, Perez, Juana, Pradella, Silke, Rachid, Shwan, Raddatz, Guenter, Rosenau, Frank, Rückert, Christian, Sasse, Florenz, Scharfe, Maren, Schuster, Stephan C., Suen, Garret, Treuner-Lange, Anke, Velicer, Gregory J., Vorhölter, Frank-Jörg, Weissman, Kira J., Welch, Roy D., Wenzel, Silke C., Whitworth, David E., Wilhelm, Susanne, Wittmann, Christoph, Bloecker, Helmut, Pühler, Alfred, and Mueller, Rolf. “Complete genome sequence of the myxobacterium Sorangium cellulosum”. Nature Biotechnology 25.11 (2007): 1281-1289.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [15]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1631047
    Meisinger-Henschel, Christine, Schmidt, Michaela, Lukassen, Susanne, Linke, Burkhard, Krause, Lutz, Konietzny, Sebastian, Goesmann, Alexander, Howley, Paul, Chaplin, Paul, Suter, Mark, and Hausmann, Juergen. “Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara”. JOURNAL OF GENERAL VIROLOGY 88.12 (2007): 3249-3259.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [14]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1632609
    Martens, Miet, Weidner, Stefan, Linke, Burkhard, de Vos, Paul, Gillis, Monique, and Willems, Anne. “A prototype taxonomic microarray targeting the rpsA housekeeping gene permits species identification within the rhizobial genus Ensifer”. SYSTEMATIC AND APPLIED MICROBIOLOGY 30.5 (2007): 390-400.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [13]
    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596976
    Krause, Andrea, Ramakumar, Adarsh, Bartels, Daniela, Battistoni, Federico, Bekel, Thomas, Boch, Jens, Boehm, Melanie, Friedrich, Frauke, Hurek, Thomas, Krause, Lutz, Linke, Burkhard, McHardy, Alice C., Sarkar, Abhijit, Schneiker-Bekel, Susanne, Syed, Arshad Ali, Thauer, Rudolf, Vorhölter, Frank-Jörg, Weidner, Stefan, Pühler, Alfred, Reinhold-Hurek, Barbara, Kaiser, Olaf, and Goesmann, Alexander. “Complete genome of the mutualistic, N-2-fixing grass endophyte Azoarcus sp strain BH72”. Nature Biotechnology 24.11 (2006): 1385-1391.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [12]
    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598182
    Schneiker-Bekel, Susanne, dos Santos, Vitor A. P. Martins, Bartels, Daniela, Bekel, Thomas, Brecht, Martina, Buhrmester, Jens, Chernikova, Tatyana N., Denaro, Renata, Ferrer, Manuel, Gertler, Christoph, Goesmann, Alexander, Golyshina, Olga V., Kaminski, Filip, Khachane, Amit N., Lang, Siegmund, Linke, Burkhard, McHardy, Alice C., Meyer, Folker, Nechitaylo, Taras, Pühler, Alfred, Regenhardt, Daniela, Rupp, Oliver, Sabirova, Julia S., Selbitschka, Werner, Yakimov, Michail M., Timmis, Kenneth N., Vorhölter, Frank-Jörg, Weidner, Stefan, Kaiser, Olaf, and Golyshin, Peter N. “Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis”. Nature Biotechnology 24.8 (2006): 997-1004.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [11]
    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2382786
    Linke, Burkhard, McHardy, Alice Carolyn, Neuweger, Heiko, Krause, Lutz, and Meyer, Folker. “The REGANOR gene prediction server for prokaryotic genomes and a database of high quality gene predictions for prokaryotes”. Applied Bioinformatics 5.3 (2006): 193-198.
    PUB | DOI
     
  • [10]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773652 OA
    Overbeek, Ross, Begley, Tadhg, Butler, Ralph M., Choudhuri, Jomuna V., Chuang, Han-Yu, Cohoon, Matthew, Crécy-Lagard, Valérie de, Diaz, Naryttza N., Disz, Terry, Edwards, Robert, Fonstein, Michael, Frank, Ed D., Gerdes, Svetlana, Glass, Elizabeth M., Goesmann, Alexander, Hanson, Andrew, Iwata-Reuyl, Dirk, Jensen, Roy, Jamshidi, Neema, Krause, Lutz, Kubal, Michael, Larsen, Niels, Linke, Burkhard, McHardy, Alice C., Meyer, Folker, Neuweger, Heiko, Olsen, Gary, Olson, Robert, Osterman, Andrei, Portnoy, Vasiliy, Pusch, Gordon D., Rodionov, Dmitry A., Rückert, Christian, Steiner, Jason, Stevens, Rick, Thiele, Ines, Vassieva, Olga, Ye, Yuzhen, Zagnitko, Olga, and Vonstein, Veronika. “The subsystems approach to genome annotation and its use in the Project to Annotate 1000 Genomes”. Nucleic Acids Research 33.17 (2005): 5691-5702.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [9]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773644 OA
    Goesmann, Alexander, Linke, Burkhard, Bartels, Daniela, Dondrup, Michael, Krause, Lutz, Neuweger, Heiko, Oehm, Sebastian, Paczian, Tobias, Wilke, Andreas, and Meyer, Folker. “BRIGEP - the BRIDGE-based genome-transcriptome-proteome browser”. Nucleic Acids Research 33.Web Server (2005): W710-W716.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [8]
    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605656
    Szczepanowski, Rafael, Krahn, Irene, Linke, Burkhard, Goesmann, Alexander, Pühler, Alfred, and Schlüter, Andreas. “Antibiotic multiresistance plasmid pRSB101 isolated from a wastewater treatment plant is related to plasmids residing in phytopathogenic bacteria and carries eight different resistance determinants including a multidrug transport system”. Microbiology 150.11 (2004): 3613-3630.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [7]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609260
    Dondrup, M., Goesmann, Alexander, Bartels, D., Kalinowski, Jörn, Krause, L., Linke, Burkhard, Rupp, O., Sczyrba, Alexander, Pühler, Alfred, and Meyer, F. “EMMA: a platform for consistent storage and efficient analysis of microarray data”. JOURNAL OF BIOTECHNOLOGY 106.2-3 (2003): 135-146.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [6]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609286
    Goesmann, Alexander, Linke, Burkhard, Rupp, O, Krause, L, Bartels, D, Dondrup, M, McHardy, AC, Wilke, A, Pühler, Alfred, and Meyer, F. “Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology”. JOURNAL OF BIOTECHNOLOGY 106.2-3 (2003): 157-167.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [5]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610023
    Baar, C., Eppinger, M., Raddatz, G., Simon, J., Lanz, C., Klimmek, O., Nandakumar, R., Gross, R., Rosinus, A., Keller, H., Jagtap, P., Linke, Burkhard, Meyer, F., Lederer, H., and Schuster, S. C. “Complete genome sequence and analysis of Wolinella succinogenes”. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 100.20 (2003): 11690-11695.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [4]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609328
    Rüberg, Silvia, Tian, Z. X., Krol, E., Linke, Burkhard, Meyer, F., Wang, Y. P., Pühler, Alfred, Weidner, Stefan, and Becker, Anke. “Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: genome-wide profiling of osmoadaptive gene expression”. JOURNAL OF BIOTECHNOLOGY 106.2-3 (2003): 255-268.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [3]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773880 OA
    Meyer, Folker, Goesmann, Alexander, McHardy, Alice C., Bartels, Daniela, Bekel, Thomas, Clausen, Jörn, Kalinowski, Jörn, Linke, Burkhard, Rupp, Oliver, Giegerich, Robert, and Pühler, Alfred. “GenDB - an open source genome annotation system for prokaryote genomes”. Nucleic Acids Research 31.8 (2003): 2187-2195.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [2]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612236
    Wulf, A., Manthey, Katja, Doll, J., Perlick, A.M., Linke, Burkhard, Bekel, Thomas, Meyer, F., Franken, P., Küster, Helge, and Krajinski, F. “Transcriptional changes in response to arbuscular mycorrhiza development in the model plant Medicago truncatula”. Mol Plant Microbe Interact 16.4 (2003): 306-314.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [1]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1895035
    Kalinowski, Jörn, Bathe, B., Bartels, D., Bischoff, N., Bott, M., Burkovski, A., Dusch, N., Eggeling, L., Eikmanns, B. J., Gaigalat, L., Goesmann, Alexander, Hartmann, M., Huthmacher, K., Kramer, R., Linke, Burkhard, McHardy, A. C., Meyer, F., Mockel, B., Pfefferle, W., Pühler, Alfred, Rey, D. A., Rückert, Christian, Rupp, O., Sahm, H., Wendisch, Volker F., Wiegrabe, I., and Tauch, Andreas. “The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins”. Journal of Biotechnology 104.1-3 (2003): 5-25.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     

Suche

Publikationen filtern

Darstellung / Sortierung

Export / Einbettung