Burkhard Linke
PEVZ-ID
33 Publikationen
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2730423Chakarov, N., Linke, B., Boerner, M., Goesmann, A., Krüger, O., & Hoffman, J. (2015). Apparent vector-mediated parent-to-offspring transmission in an avian malaria-like parasite. Molecular Ecology, 24(6), 1355-1363. doi:10.1111/mec.13115
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2615581Brinkrolf, K., Rupp, O., Laux, H., Kollin, F., Ernst, W., Linke, B., Kofler, R., et al. (2013). Chinese hamster genome sequenced from sorted chromosomes. Nature Biotechnology, 31(8), 694-695. doi:10.1038/nbt.2645
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490535Heinl, S., Wibberg, D., Eikmeyer, F. G., Szczepanowski, R., Blom, J., Linke, B., Goesmann, A., et al. (2012). Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage. Journal of Biotechnology, 161(2), 153-166. doi:10.1016/j.jbiotec.2012.03.007
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526281Zischka, M., Kuenne, C., Blom, J., Dabrowski, P. W., Linke, B., Hain, T., Nitsche, A., et al. (2012). Complete Genome Sequence of the Porcine Isolate Enterococcus faecalis D32. Journal of Bacteriology, 194(19), 5490-5491. doi:10.1128/JB.01298-12
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445Schneider, J., Blom, J., Jaenicke, S., Linke, B., Brinkrolf, K., Neuweger, H., Tauch, A., et al. (2011). RAPYD - Rapid Annotation Platform for Yeast Data. Journal of Biotechnology, 155(1), 118-126. https://doi.org/10.1016/j.jbiotec.2010.10.076
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2290032Joseph, B., Schwarz, R. F., Linke, B., Blom, J., Becker, A., Claus, H., Goesmann, A., et al. (2011). Virulence Evolution of the Human Pathogen Neisseria meningitidis by Recombination in the Core and Accessory Genome. PLoS ONE, 6(4), e18441. https://doi.org/10.1371/journal.pone.0018441
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2011 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2017892Schneiker-Bekel, S., Wibberg, D., Bekel, T., Blom, J., Linke, B., Neuweger, H., Stiens, M., et al. (In Press). The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome. Journal of Biotechnology, 155(1), 20-33. https://doi.org/10.1016/j.jbiotec.2010.12.018
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093578Linke, B., Giegerich, R., & Goesmann, A. (2011). Conveyor: a workflow engine for bioinformatic analyses. Bioinformatics, 27(7), 903-911. https://doi.org/10.1093/bioinformatics/btr040
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785275Trost, E., Götker, S., Schneider, J., Schneiker-Bekel, S., Szczepanowski, R., Tilker, A., Viehöver, P., et al. (2010). Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion. BMC Genomics, 11(1), 91. https://doi.org/10.1186/1471-2164-11-91
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2010 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1894907Mittard-Runte, V., Bekel, T., Blom, J., Dondrup, M., Henckel, K., Jaenicke, S., Krause, L., et al. (2010). Practical Guide: Genomic Techniques and How to Apply Them to Marine Questions. In J. M. Cock, K. Tessmar-Raible, C. Boyen, & F. Viard (Eds.), Introduction to Marine Genomics (Advances in Marine Genomics) (Vol. 1, pp. 315-396). Netherlands: Springer Netherlands. https://doi.org/10.1007/978-90-481-8639-6_9
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1930110Joseph, B., Schneiker-Bekel, S., Schramm-Glueck, A., Blom, J., Claus, H., Linke, B., Schwarz, R. F., et al. (2010). Comparative Genome Biology of a Serogroup B Carriage and Disease Strain Supports a Polygenic Nature of Meningococcal Virulence. JOURNAL OF BACTERIOLOGY, 192(20), 5363-5377. https://doi.org/10.1128/JB.00883-10
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634467Becker, A., Barnett, M. J., Capela, D., Dondrup, M., Kamp, P. - B., Krol, E., Linke, B., et al. (2009). A portal for rhizobial genomes: RhizoGATE integrates a Sinorhizobium meliloti genome annotation update with postgenome data. JOURNAL OF BIOTECHNOLOGY, 140(1-2), 45-50. https://doi.org/10.1016/j.jbiotec.2008.11.006
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635321Dondrup, M., Albaum, S., Griebel, T., Henckel, K., Jünemann, S., Kahlke, T., Kleindt, C. K., et al. (2009). EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data. BMC Bioinformatics, 10(1), 50. https://doi.org/10.1186/1471-2105-10-50
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783292Gross, R., Guzman, C. A., Sebaihia, M., Martins dos Santos, V. A. P., Pieper, D. H., Koebnik, R., Lechner, M., et al. (2008). The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae. BMC Genomics, 9(1), 449. https://doi.org/10.1186/1471-2164-9-449
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592024Vorhölter, F. - J., Schneiker-Bekel, S., Goesmann, A., Krause, L., Bekel, T., Kaiser, O., Linke, B., et al. (2008). The genome of Xanthomonas campestris pv. campestris B 100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis. Journal of Biotechnology, 134(1-2), 33-45. https://doi.org/10.1016/j.jbiotec.2007.12.013
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592257Schoen, C., Blom, J., Claus, H., Schramm-Glueck, A., Brandt, P., Mueller, T., Goesmann, A., et al. (2008). Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 105(9), 3473-3478. https://doi.org/10.1073/pnas.0800151105
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1631327Schneiker-Bekel, S., Perlova, O., Kaiser, O., Gerth, K., Alici, A., Altmeyer, M. O., Bartels, D., et al. (2007). Complete genome sequence of the myxobacterium Sorangium cellulosum. Nature Biotechnology, 25(11), 1281-1289. https://doi.org/10.1038/nbt1354
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1631047Meisinger-Henschel, C., Schmidt, M., Lukassen, S., Linke, B., Krause, L., Konietzny, S., Goesmann, A., et al. (2007). Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara. JOURNAL OF GENERAL VIROLOGY, 88(12), 3249-3259. https://doi.org/10.1099/vir.0.83156-0
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1632609Martens, M., Weidner, S., Linke, B., de Vos, P., Gillis, M., & Willems, A. (2007). A prototype taxonomic microarray targeting the rpsA housekeeping gene permits species identification within the rhizobial genus Ensifer. SYSTEMATIC AND APPLIED MICROBIOLOGY, 30(5), 390-400. https://doi.org/10.1016/j.syapm.2007.01.002
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596976Krause, A., Ramakumar, A., Bartels, D., Battistoni, F., Bekel, T., Boch, J., Boehm, M., et al. (2006). Complete genome of the mutualistic, N-2-fixing grass endophyte Azoarcus sp strain BH72. Nature Biotechnology, 24(11), 1385-1391. https://doi.org/10.1038/nbt1243
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598182Schneiker-Bekel, S., dos Santos, V. A. P. M., Bartels, D., Bekel, T., Brecht, M., Buhrmester, J., Chernikova, T. N., et al. (2006). Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis. Nature Biotechnology, 24(8), 997-1004. https://doi.org/10.1038/nbt1232
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2382786Linke, B., McHardy, A. C., Neuweger, H., Krause, L., & Meyer, F. (2006). The REGANOR gene prediction server for prokaryotic genomes and a database of high quality gene predictions for prokaryotes. Applied Bioinformatics, 5(3), 193-198. https://doi.org/10.2165/00822942-200605030-00008
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773652Overbeek, R., Begley, T., Butler, R. M., Choudhuri, J. V., Chuang, H. - Y., Cohoon, M., Crécy-Lagard, V. de, et al. (2005). The subsystems approach to genome annotation and its use in the Project to Annotate 1000 Genomes. Nucleic Acids Research, 33(17), 5691-5702. https://doi.org/10.1093/nar/gki866
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773644Goesmann, A., Linke, B., Bartels, D., Dondrup, M., Krause, L., Neuweger, H., Oehm, S., et al. (2005). BRIGEP - the BRIDGE-based genome-transcriptome-proteome browser. Nucleic Acids Research, 33(Web Server), W710-W716. https://doi.org/10.1093/nar/gki400
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605656Szczepanowski, R., Krahn, I., Linke, B., Goesmann, A., Pühler, A., & Schlüter, A. (2004). Antibiotic multiresistance plasmid pRSB101 isolated from a wastewater treatment plant is related to plasmids residing in phytopathogenic bacteria and carries eight different resistance determinants including a multidrug transport system. Microbiology, 150(11), 3613-3630. https://doi.org/10.1099/mic.0.27317-0
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609260Dondrup, M., Goesmann, A., Bartels, D., Kalinowski, J., Krause, L., Linke, B., Rupp, O., et al. (2003). EMMA: a platform for consistent storage and efficient analysis of microarray data. JOURNAL OF BIOTECHNOLOGY, 106(2-3), 135-146. https://doi.org/10.1016/j.jbiotec.2003.08.010
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609286Goesmann, A., Linke, B., Rupp, O., Krause, L., Bartels, D., Dondrup, M., McHardy, A. C., et al. (2003). Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology. JOURNAL OF BIOTECHNOLOGY, 106(2-3), 157-167. https://doi.org/10.1016/j.jbiotec.2003.08.007
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610023Baar, C., Eppinger, M., Raddatz, G., Simon, J., Lanz, C., Klimmek, O., Nandakumar, R., et al. (2003). Complete genome sequence and analysis of Wolinella succinogenes. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 100(20), 11690-11695. https://doi.org/10.1073/pnas.1932838100
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609328Rüberg, S., Tian, Z. X., Krol, E., Linke, B., Meyer, F., Wang, Y. P., Pühler, A., et al. (2003). Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: genome-wide profiling of osmoadaptive gene expression. JOURNAL OF BIOTECHNOLOGY, 106(2-3), 255-268. https://doi.org/10.1016/j.jbiotec.2003.08.005
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773880Meyer, F., Goesmann, A., McHardy, A. C., Bartels, D., Bekel, T., Clausen, J., Kalinowski, J., et al. (2003). GenDB - an open source genome annotation system for prokaryote genomes. Nucleic Acids Research, 31(8), 2187-2195. https://doi.org/10.1093/nar/gkg312
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612236Wulf, A., Manthey, K., Doll, J., Perlick, A. M., Linke, B., Bekel, T., Meyer, F., et al. (2003). Transcriptional changes in response to arbuscular mycorrhiza development in the model plant Medicago truncatula. Mol Plant Microbe Interact, 16(4), 306-314. https://doi.org/10.1094/MPMI.2003.16.4.306
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1895035Kalinowski, J., Bathe, B., Bartels, D., Bischoff, N., Bott, M., Burkovski, A., Dusch, N., et al. (2003). The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins. Journal of Biotechnology, 104(1-3), 5-25. https://doi.org/10.1016/S0168-1656(03)00154-8