PUB - Publikationen an der Universität Bielefeld

Alle markieren

• [34]
  

  2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2988228

  Agrofoglio, Yamila Carla, Iglesias, Maria Jose, Perez-Santangelo, Soledad, de Leone, Maria Jose, Köster, Tino, Catala, Rafael, Salinas, Julio, Yanovsky, Marcelo, Staiger, Dorothee, and Mateos, Julieta. “Arginine methylation of SM-LIKE PROTEIN 4 antagonistically affects alternative splicing during Arabidopsis stress responses”. Plant Cell (2024): koae051.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [33]
  

  2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2986985

  Lewinski, Martin, Brüggemann, Mirko, Köster, Tino, Reichel, Marlene, Bergelt, Thorsten, Meyer, Katja, König, Julian, Zarnack, Kathi, and Staiger, Dorothee. “Mapping protein-RNA binding in plants with individual-nucleotide-resolution UV cross-linking and immunoprecipitation (plant iCLIP2)”. Nature Protocols (2024).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [32]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2978193

  Köster, Tino, and Sitte, Astrid. “Plant iCLIP — auf Spurensuche im Transkriptom der Pflanze”. BIOspektrum 29.2 (2023): 174-176.

  PUB | DOI
   
• [31]
  

  2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2985598

  Lewinski, Martin, Steffen, Alexander, Kachariya, Nitin, Elgner, Mareike, Schmal, Christoph, Messini, Niki, Köster, Tino, Reichel, Marlene, Sattler, Michael, Zarnack, Kathi, and Staiger, Dorothee. “Arabidopsis thaliana GLYCINE RICH RNA-BINDING PROTEIN 7 interaction with its iCLIP target LHCB1.1 correlates with changes in RNA stability and circadian oscillation”. Plant Journal (2023).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [30]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965202

  Lüders, Janina, Winkel, Andreas, Reichel, Marlene, Bitterer, Valentin, Scheibe, Marion, Widmann, Christiane, Butter, Falk, and Köster, Tino. “Identification of Pri-miRNA Stem-Loop Interacting Proteins in Plants Using a Modified Version of the Csy4 CRISPR Endonuclease”. International Journal of Molecular Sciences 23.16 (2022): 8961.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [29]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964517

  Zhang, Runxuan, Kuo, Richard, Coulter, Max, Calixto, Cristiane P G, Entizne, Juan Carlos, Guo, Wenbin, Marquez, Yamile, Milne, Linda, Riegler, Stefan, Matsui, Akihiro, Tanaka, Maho, Harvey, Sarah, Gao, Yubang, WieSSner-Kroh, Theresa, Paniagua, Alejandro, Crespi, Martin, Denby, Katherine, Hur, Asa Ben, Huq, Enamul, Jantsch, Michael, Jarmolowski, Artur, Köster, Tino, Laubinger, Sascha, Li, Qingshun Quinn, Gu, Lianfeng, Seki, Motoaki, Staiger, Dorothee, Sunkar, Ramanjulu, Szweykowska-Kulinska, Zofia, Tu, Shih-Long, Wachter, Andreas, Waugh, Robbie, Xiong, Liming, Zhang, Xiao-Ning, Conesa, Ana, Reddy, Anireddy S N, Barta, Andrea, Kalyna, Maria, and Brown, John W S. “A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis”. Genome biology 23.1 (2022): 149.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [28]
  

  2021 | Preprint | Veröffentlicht | PUB-ID: 2954082

  Arribas-Hernandez, Laura, Rennie, Sarah, Köster, Tino, Schon, Michael, Porcelli, Carlotta, Lewinski, Martin, Enugutti, Balaji, Nodine, Michael D, Staiger, Dorothee, Andersson, Robin, and Brodersen, Peter. “Principles of mRNA targeting and regulation via the Arabidopsis m6A-binding proteins ECT2 and ECT3”. bioRxiv (2021).

  PUB | DOI | Preprint
   
• [27]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959415

  Arribas-Hernández, Laura, Rennie, Sarah, Köster, Tino, Porcelli, Carlotta, Lewinski, Martin, Staiger, Dorothee, Andersson, Robin, and Brodersen, Peter. “Principles of mRNA targeting via the Arabidopsis m6A-binding protein ECT2”. eLife 10 (2021): e72375.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [26]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952670

  Hafner, Markus, Katsantoni, Maria, Köster, Tino, Marks, James, Mukherjee, Joyita, Staiger, Dorothee, Ule, Jernej, and Zavolan, Mihaela. “CLIP and complementary methods”. Nature Reviews Methods Primers 1.1 (2021): 20.

  PUB | DOI | WoS
   
• [25]
  

  2021 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2948744

  Köster, Tino, and Staiger, Dorothee. “RNA-Binding Protein Immunoprecipitation and High-Throughput Sequencing”. Arabidopsis Protocols . Ed. José J. Sanchez-Serrano and Julio Salinas. New York: Humana, 2021.Vol. 2200. Methods in molecular biology . 453-461.

  PUB | DOI | PubMed | Europe PMC
   
• [24]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942001

  Lewinski, Martin, Bramkamp, Yannik, Köster, Tino, and Staiger, Dorothee. “SEQing: web-based visualization of iCLIP and RNA-seq data in an interactive python framework.”. BMC bioinformatics 21.1 (2020): 113.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [23]
  

  2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2945219

  Köster, Tino, and Staiger, Dorothee. “Plant Individual Nucleotide Resolution Cross-Linking and Immunoprecipitation to Characterize RNA-Protein Complexes.”. Methods in molecular biology (Clifton, N.J.) 2166 (2020): 255-267.

  PUB | DOI | PubMed | Europe PMC
   
• [22]
  

  2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2937585

  Köster, Tino, Reichel, Marlene, and Staiger, Dorothee. “CLIP and RNA interactome studies to unravel genome-wide RNA-protein interactions in vivo in Arabidopsis thaliana.”. Methods (San Diego, Calif.) (2019).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [21]
  

  2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936720

  Reichel, Marlene, Köster, Tino, and Staiger, Dorothee. “Marking RNA: m6A writers, readers and functions in Arabidopsis”. Journal of molecular cell biology 11.10 (2019): 899-910.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [20]
  

  2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2934855

  Lewinski, Martin, and Köster, Tino. “Systems Approaches to Map In Vivo RNA–Protein Interactions in Arabidopsis thaliana”. Systems Biology. Ed. Nikolaus Rajewsky, Stefan Jurga, and Jan Barciszewski. Cham: Springer International Publishing, 2018. RNA Technologies. 77-95.

  PUB | DOI
   
• [19]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919118

  Johansson, Mikael, and Köster, Tino. “On the move through time - a historical review of plant clock research”. Plant Biology 21.S1 (2018): 13-20.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [18]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919455

  Köster, Tino. “miRNAs - der Hacker-Angriff der Parasiten”. Biologie in unserer Zeit 48.2 (2018): 87-88.

  PUB | DOI
   
• [17]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918314

  Köster, Tino, and Meyer, Katja. “Plant Ribonomics: Proteins in Search of RNA Partners”. Trends in Plant Science 23.4 (2018): 352-365.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [16]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914954

  Meyer, Katja, Köster, Tino, Nolte, Christine, Weinholdt, Claus, Lewinski, Martin, Grosse, Ivo, and Staiger, Dorothee. “Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7”. Genome Biology 18.1 (2017): 204.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [15]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914953

  Köster, Tino. “Volkszählung in der Zelle - wer bindet RNA?”. Biologie in unserer Zeit 47.4 (2017): 226-227.

  PUB | DOI
   
• [14]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911065

  Köster, Tino, Marondedze, Claudius, Meyer, Katja, and Staiger, Dorothee. “RNA-Binding Proteins Revisited – The Emerging Arabidopsis mRNA Interactome”. Trends in Plant Science 22.6 (2017): 512-526.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [13]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911046

  Foley, Shawn W., Gosai, Sager J., Wang, Dongxue, Selamoglu, Nur, Sollitti, Amelia C., Köster, Tino, Steffen, Alexander, Lyons, Eric, Daldal, Fevzi, Garcia, Benjamin A., Staiger, Dorothee, Deal, Roger B., and Gregory, Brian D. “A Global View of RNA-Protein Interactions Identifies Post-transcriptional Regulators of Root Hair Cell Fate”. Developmental Cell 41.2 (2017): 204-220.e5.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [12]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764695

  Meyer, Katja, Köster, Tino, and Staiger, Dorothee. “Pre-mRNA Splicing in Plants: In Vivo Functions of RNA-Binding Proteins Implicated in the Splicing Process”. Biomolecules 5.3 (2015): 1717-1740.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [11]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2629103

  Köster, Tino, and Staiger, Dorothee. “RNA-Binding Protein Immunoprecipitation from Whole-Cell Extracts”. Methods in molecular biology (Clifton, N.J.) 1062 (2014): 679-695.

  PUB | DOI | PubMed | Europe PMC
   
• [10]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2631517

  Hackmann, Christian, Korneli, Christin, Kutyniok, Magdalene, Köster, Tino, Wiedenlübbert, Matthias, Müller, Caroline, and Staiger, Dorothee. “Salicylic acid-dependent and -independent impact of an RNA-binding protein on plant immunity”. Plant, Cell & Environment 37.3 (2014): 696-706.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [9]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709993

  Meyer, Katja, Köster, Tino, and Staiger, Dorothee. “Unraveling post-transcriptional networks: Analysis of RNA-protein interactions with RNA immunoprecipitation”. Biotechnologia. Journal of Biotechnology, Computational Biology and Bionanotechnology 95.1 (2014): 43.

  PUB | DOI
   
• [8]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694724

  Köster, Tino, Meyer, Katja, Weinholdt, Claus, Smith, Lisa M., Lummer, Martina, Speth, Corinna, Grosse, Ivo, Weigel, Detlef, and Staiger, Dorothee. “Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in Arabidopsis”. Nucleic acids research 42.15 (2014): 9925-9936.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [7]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676604

  Köster, Tino, Haas, Meike, and Staiger, Dorothee. “The RIPper Case: Identification of RNA-Binding Protein Targets by RNA Immunoprecipitation”. Methods in molecular biology (Clifton, N.J.) 1158 (2014): 107-121.

  PUB | DOI | PubMed | Europe PMC
   
• [6]
  

  2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2709933

  Meyer, Katja, Köster, Tino, and Staiger, Dorothee. “Unraveling post-tramscriptional networks: Analysis of RNA-protein interactions with RNA immunoprecipitation”. BioTechnologia 95.1 (2014): 43-43.

  PUB
   
• [5]
  

  2014 | Dissertation | PUB-ID: 2717324

  Köster, Tino. Funktion von Ribonukleoproteinkomplexen in der posttranskriptionellen Regulation und microRNA-Biogenese. Bielefeld, 2014.

  PUB
   
• [4]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709991

  Köster, Tino, Brown, John WS, and Staiger, Dorothee. “Jenseits des Genoms – Alternatives Spleißen erhöht die Vielfalt des Transkriptoms”. Naturwissenschaftliche Rundschau 67.11 (2014): 566-571.

  PUB
   
• [3]
  

  2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548847

  Streitner, Corinna, Köster, Tino, Simpson, Craig G., Shaw, Paul, Danisman, Selahattin, Brown, John W. S., and Staiger, Dorothee. “An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana”. Nucleic acids research 40.22 (2012): 11240-11255.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [2]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003474

  Staiger, Dorothee, and Köster, Tino. “Spotlight on post-transcriptional control in the circadian system”. Cellular and Molecular Life Sciences 68.1 (2011): 71-83.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [1]
  

  2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2438856

  Staiger, Dorothee, and Köster, Tino. “Timing is everything - Die Innere Uhr der Pflanzen”. Labor & More 5 (2009): 40-41.

  PUB | PDF | Download (ext.)