Tino Köster

tino.koester@uni-bielefeld.de
ORCID logo https://orcid.org/0000-0003-3984-9813

PEVZ-ID
13028045

34 Publikationen

Alle markieren

  • [34]
    2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2988228
    Agrofoglio YC, Iglesias MJ, Perez-Santangelo S, de Leone MJ, Köster T, Catala R, Salinas J, Yanovsky M, Staiger D, Mateos J (2024)
    Arginine methylation of SM-LIKE PROTEIN 4 antagonistically affects alternative splicing during Arabidopsis stress responses.
    Plant Cell: koae051.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [33]
    2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2986985
    Lewinski M, Brüggemann M, Köster T, Reichel M, Bergelt T, Meyer K, König J, Zarnack K, Staiger D (2024)
    Mapping protein-RNA binding in plants with individual-nucleotide-resolution UV cross-linking and immunoprecipitation (plant iCLIP2).
    Nature Protocols.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [32]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2978193
    Köster T, Sitte A (2023)
    Plant iCLIP — auf Spurensuche im Transkriptom der Pflanze.
    BIOspektrum 29(2): 174-176.
    PUB | DOI
     
  • [31]
    2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2985598
    Lewinski M, Steffen A, Kachariya N, Elgner M, Schmal C, Messini N, Köster T, Reichel M, Sattler M, Zarnack K, Staiger D (2023)
    Arabidopsis thaliana GLYCINE RICH RNA-BINDING PROTEIN 7 interaction with its iCLIP target LHCB1.1 correlates with changes in RNA stability and circadian oscillation.
    Plant Journal.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [30]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965202 OA
    Lüders J, Winkel A, Reichel M, Bitterer V, Scheibe M, Widmann C, Butter F, Köster T (2022)
    Identification of Pri-miRNA Stem-Loop Interacting Proteins in Plants Using a Modified Version of the Csy4 CRISPR Endonuclease.
    International Journal of Molecular Sciences 23(16): 8961.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [29]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964517
    Zhang R, Kuo R, Coulter M, Calixto CPG, Entizne JC, Guo W, Marquez Y, Milne L, Riegler S, Matsui A, Tanaka M, Harvey S, Gao Y, WieSSner-Kroh T, Paniagua A, Crespi M, Denby K, Hur AB, Huq E, Jantsch M, Jarmolowski A, Köster T, Laubinger S, Li QQ, Gu L, Seki M, Staiger D, Sunkar R, Szweykowska-Kulinska Z, Tu S-L, Wachter A, Waugh R, Xiong L, Zhang X-N, Conesa A, Reddy ASN, Barta A, Kalyna M, Brown JWS (2022)
    A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis.
    Genome biology 23(1): 149.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [28]
    2021 | Preprint | Veröffentlicht | PUB-ID: 2954082
    Arribas-Hernandez L, Rennie S, Köster T, Schon M, Porcelli C, Lewinski M, Enugutti B, Nodine MD, Staiger D, Andersson R, Brodersen P (2021)
    Principles of mRNA targeting and regulation via the Arabidopsis m6A-binding proteins ECT2 and ECT3.
    bioRxiv.
    PUB | DOI | Preprint
     
  • [27]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959415
    Arribas-Hernández L, Rennie S, Köster T, Porcelli C, Lewinski M, Staiger D, Andersson R, Brodersen P (2021)
    Principles of mRNA targeting via the Arabidopsis m6A-binding protein ECT2.
    eLife 10: e72375.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [26]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952670
    Hafner M, Katsantoni M, Köster T, Marks J, Mukherjee J, Staiger D, Ule J, Zavolan M (2021)
    CLIP and complementary methods.
    Nature Reviews Methods Primers 1(1): 20.
    PUB | DOI | WoS
     
  • [25]
    2021 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2948744
    Köster T, Staiger D (2021)
    RNA-Binding Protein Immunoprecipitation and High-Throughput Sequencing.
    In: Arabidopsis Protocols . Sanchez-Serrano JJ, Salinas J (Eds); Methods in molecular biology , 2200. New York: Humana: 453-461.
    PUB | DOI | PubMed | Europe PMC
     
  • [24]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942001 OA
    Lewinski M, Bramkamp Y, Köster T, Staiger D (2020)
    SEQing: web-based visualization of iCLIP and RNA-seq data in an interactive python framework.
    BMC bioinformatics 21(1): 113.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [23]
    2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2945219
    Köster T, Staiger D (2020)
    Plant Individual Nucleotide Resolution Cross-Linking and Immunoprecipitation to Characterize RNA-Protein Complexes.
    Methods in molecular biology (Clifton, N.J.) 2166: 255-267.
    PUB | DOI | PubMed | Europe PMC
     
  • [22]
    2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2937585
    Köster T, Reichel M, Staiger D (2019)
    CLIP and RNA interactome studies to unravel genome-wide RNA-protein interactions in vivo in Arabidopsis thaliana.
    Methods (San Diego, Calif.).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [21]
    2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936720
    Reichel M, Köster T, Staiger D (2019)
    Marking RNA: m6A writers, readers and functions in Arabidopsis.
    Journal of molecular cell biology 11(10): 899-910.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [20]
    2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2934855
    Lewinski M, Köster T (2018)
    Systems Approaches to Map In Vivo RNA–Protein Interactions in Arabidopsis thaliana.
    In: Systems Biology. Rajewsky N, Jurga S, Barciszewski J (Eds); RNA Technologies, Cham: Springer International Publishing: 77-95.
    PUB | DOI
     
  • [19]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919118
    Johansson M, Köster T (2018)
    On the move through time - a historical review of plant clock research.
    Plant Biology 21(S1): 13-20.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [18]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919455
    Köster T (2018)
    miRNAs - der Hacker-Angriff der Parasiten.
    Biologie in unserer Zeit 48(2): 87-88.
    PUB | DOI
     
  • [17]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918314
    Köster T, Meyer K (2018)
    Plant Ribonomics: Proteins in Search of RNA Partners.
    Trends in Plant Science 23(4): 352-365.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [16]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914954 OA
    Meyer K, Köster T, Nolte C, Weinholdt C, Lewinski M, Grosse I, Staiger D (2017)
    Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7.
    Genome Biology 18(1): 204.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [15]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914953
    Köster T (2017)
    Volkszählung in der Zelle - wer bindet RNA?
    Biologie in unserer Zeit 47(4): 226-227.
    PUB | DOI
     
  • [14]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911065
    Köster T, Marondedze C, Meyer K, Staiger D (2017)
    RNA-Binding Proteins Revisited – The Emerging Arabidopsis mRNA Interactome.
    Trends in Plant Science 22(6): 512-526.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [13]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911046
    Foley SW, Gosai SJ, Wang D, Selamoglu N, Sollitti AC, Köster T, Steffen A, Lyons E, Daldal F, Garcia BA, Staiger D, Deal RB, Gregory BD (2017)
    A Global View of RNA-Protein Interactions Identifies Post-transcriptional Regulators of Root Hair Cell Fate.
    Developmental Cell 41(2): 204-220.e5.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [12]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764695 OA
    Meyer K, Köster T, Staiger D (2015)
    Pre-mRNA Splicing in Plants: In Vivo Functions of RNA-Binding Proteins Implicated in the Splicing Process.
    Biomolecules 5(3): 1717-1740.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [11]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2629103
    Köster T, Staiger D (2014)
    RNA-Binding Protein Immunoprecipitation from Whole-Cell Extracts.
    Methods in molecular biology (Clifton, N.J.) 1062: 679-695.
    PUB | DOI | PubMed | Europe PMC
     
  • [10]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2631517
    Hackmann C, Korneli C, Kutyniok M, Köster T, Wiedenlübbert M, Müller C, Staiger D (2014)
    Salicylic acid-dependent and -independent impact of an RNA-binding protein on plant immunity.
    Plant, Cell & Environment 37(3): 696-706.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [9]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709993
    Meyer K, Köster T, Staiger D (2014)
    Unraveling post-transcriptional networks: Analysis of RNA-protein interactions with RNA immunoprecipitation.
    Biotechnologia. Journal of Biotechnology, Computational Biology and Bionanotechnology 95(1): 43.
    PUB | DOI
     
  • [8]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694724
    Köster T, Meyer K, Weinholdt C, Smith LM, Lummer M, Speth C, Grosse I, Weigel D, Staiger D (2014)
    Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in Arabidopsis.
    Nucleic acids research 42(15): 9925-9936.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [7]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676604
    Köster T, Haas M, Staiger D (2014)
    The RIPper Case: Identification of RNA-Binding Protein Targets by RNA Immunoprecipitation.
    Methods in molecular biology (Clifton, N.J.) 1158: 107-121.
    PUB | DOI | PubMed | Europe PMC
     
  • [6]
    2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2709933
    Meyer K, Köster T, Staiger D (2014)
    Unraveling post-tramscriptional networks: Analysis of RNA-protein interactions with RNA immunoprecipitation.
    BioTechnologia 95(1): 43-43.
    PUB
     
  • [5]
    2014 | Dissertation | PUB-ID: 2717324
    Köster T (2014)
    Funktion von Ribonukleoproteinkomplexen in der posttranskriptionellen Regulation und microRNA-Biogenese.
    Bielefeld.
    PUB
     
  • [4]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709991
    Köster T, Brown JWS, Staiger D (2014)
    Jenseits des Genoms – Alternatives Spleißen erhöht die Vielfalt des Transkriptoms.
    Naturwissenschaftliche Rundschau 67(11): 566-571.
    PUB
     
  • [3]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548847
    Streitner C, Köster T, Simpson CG, Shaw P, Danisman S, Brown JWS, Staiger D (2012)
    An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana.
    Nucleic acids research 40(22): 11240-11255.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [2]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003474
    Staiger D, Köster T (2011)
    Spotlight on post-transcriptional control in the circadian system.
    Cellular and Molecular Life Sciences 68(1): 71-83.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [1]
    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2438856 OA
    Staiger D, Köster T (2009)
    Timing is everything - Die Innere Uhr der Pflanzen.
    Labor & More 5: 40-41.
    PUB | PDF | Download (ext.)
     
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