PUB - Publikationen an der Universität Bielefeld

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• [65]
  

  2023 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2980346

  Röchter M, Thiesbrummel S, Marchi H, Fuchs C, Rudwaleit M. Changes in diagnosing giant cell arteritis of the temporal artery over a 7.7 year period. Annals of the Rheumatic Diseases. 2023;82(Suppl. 1):1579.

  PUB | DOI | WoS
   
• [64]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2981131

  Reinkemeyer C, Khazaei Y, Weigert M, et al. The Prospective COVID-19 Post-Immunization Serological Cohort in Munich (KoCo-Impf): Risk Factors and Determinants of Immune Response in Healthcare Workers. Viruses. 2023;15(7): 1574.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [63]
  

  2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2969305

  Marchi H, Fuchs C. Hurdle-QAP models overcome dependency and sparsity in scientific collaboration count networks. The Journal of Mathematical Sociology. 2023:1-28.

  PUB | DOI | Download (ext.) | WoS
   
• [62]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979171

  Wille K, Brouka M, Bernhardt J, et al. Outcome of 129 Pregnancies in Polycythemia Vera Patients: A Report of the European LeukemiaNET. HemaSphere. 2023;7(5): e882.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [61]
  

  2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2984094

  Wille K, Deventer E, Sadjadian P, et al. Arterial and Venous Thromboembolic Complications in 832 Patients with BCR-ABL-Negative Myeloproliferative Neoplasms. Hämostaseologie . 2023.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [60]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2980935

  Le Gleut R, Plank M, Pütz P, et al. The representative COVID-19 cohort Munich (KoCo19): from the beginning of the pandemic to the Delta virus variant. BMC Infectious Diseases. 2023;23(1): 466.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [59]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2980348

  Pedron S, Laxy M, Radon K, et al. Socioeconomic and risk-related drivers of compliance with measures to prevent SARS-CoV-2 infection: evidence from the Munich-based KoCo19 study. BMC Public Health. 2023;23(1): 860.

  PUB | DOI
   
• [58]
  

  2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2958646

  Contento L, Castelletti N, Raimúndez E, et al. Integrative modelling of reported case numbers and seroprevalence reveals time-dependent test efficiency and infection rates. Epidemics. 2023;43: 100681.

  PUB | DOI | WoS | PubMed | Europe PMC | Preprint
   
• [57]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2958644

  Wille K, Huenerbein K, Jagenberg E, et al. Bleeding complications in bcr-abl negative myeloproliferative neoplasms (MPN): a retrospective single-center study of 829 MPN patients. European Journal of Haematology. 2022;108(2):154-162.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [56]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2980363

  Puchinger K, Castelletti N, Rubio-Acero R, et al. The interplay of viral loads, clinical presentation, and serological responses in SARS-CoV-2 – Results from a prospective cohort of outpatient COVID-19 cases. Virology. 2022;569:37-43.

  PUB | DOI
   
• [55]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2963169

  Pieschner S, Hasenauer J, Fuchs C. Identifiability analysis for models of the translation kinetics after mRNA transfection. Journal of Mathematical Biology. 2022;84(7): 56.

  PUB | DOI | WoS | PubMed | Europe PMC | Preprint
   
• [54]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2988024

  Brand I, Gilberg L, Bruger J, et al. Broad T Cell Targeting of Structural Proteins After SARS-CoV-2 Infection: High Throughput Assessment of T Cell Reactivity Using an Automated Interferon Gamma Release Assay. Frontiers in Immunology. 2021;12.

  PUB | DOI
   
• [53]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959082

  Stegelmann F, Wille K, Marchi H, et al. Publisher Correction: Significant association of cutaneous adverse events with hydroxyurea: results from a prospective non-interventional study in BCR-ABL1-negative myeloproliferative neoplasms (MPN) - on behalf of the German Study Group-MPN. Leukemia. 2021;35:3635.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [52]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944734

  Stegelmann F, Wille K, Busen H, et al. Significant association of cutaneous adverse events with hydroxyurea: results from a prospective non-interventional study in BCR-ABL1-negative myeloproliferative neoplasms (MPN) - on behalf of the German Study Group-MPN. Leukemia. 2021;35:628-631.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [51]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957095

  Sekhri R, Sadjadian P, Becker T, et al. Ruxolitinib-treated polycythemia vera patients and their risk of secondary malignancies. Annals of Hematology. 2021;100(11):2707-2716.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [50]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956797

  Radon K, Bakuli A, Pütz P, et al. From first to second wave: follow-up of the prospective Covid-19 cohort (KoCo19) in Munich (Germany). BMC Infectious Diseases. 2021;21(1): 925.

  PUB | DOI | WoS | PubMed | Europe PMC | Preprint
   
• [49]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944735

  Amrhein L, Fuchs C. stochprofML: Stochastic Profiling Using Maximum Likelihood Estimation in R. BMC Bioinformatics. 2021;22: 123.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC | arXiv
   
• [48]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957769

  Olbrich L, Castelletti N, Schälte Y, et al. Head-to-head evaluation of seven different seroassays including direct viral neutralisation in a representative cohort for SARS-CoV-2. Journal of General Virology. 2021;102(10).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [47]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957809

  Rubio-Acero R, Beyerl J, Muenchhoff M, et al. Spatially resolved qualified sewage spot sampling to track SARS-CoV-2 dynamics in Munich - One year of experience. Science of The Total Environment. 2021;797: 149031.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [46]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957811

  Beyerl J, Rubio-Acero R, Castelletti N, et al. A dried blood spot protocol for high throughput analysis of SARS-CoV-2 serology based on the Roche Elecsys anti-N assay. EBioMedicine. 2021;70: 103502.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [45]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946318

  Krautenbacher N, Kabesch M, Horak E, et al. Asthma in farm children is more determined by genetic polymorphisms and in non-farm children by environmental factors. Pediatric allergy and immunology . 2021;32(2):295-304.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [44]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955537

  Brand I, Gilberg L, Bruger J, et al. Broad T Cell Targeting of Structural Proteins After SARS-CoV-2 Infection: High Throughput Assessment of T Cell Reactivity Using an Automated Interferon Gamma Release Assay. Frontiers in Immunology. 2021;12: 688436.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [43]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2951201

  Pritsch M, Radon K, Bakuli A, et al. Prevalence and Risk Factors of Infection in the Representative COVID-19 Cohort Munich. International journal of environmental research and public health. 2021;18(7): 3572.

  PUB | PDF | DOI | Download (ext.) | PubMed | Europe PMC | Preprint
   
• [42]
  

  2021 | Preprint | Veröffentlicht | PUB-ID: 2951202

  Olbrich L, Castelletti N, Schälte Y, et al. A Serology Strategy for Epidemiological Studies Based on the Comparison of the Performance of Seven Different Test Systems - The Representative COVID-19 Cohort Munich. bioRxiv. 2021.

  PUB | DOI | Preprint
   
• [41]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946421

  Pieschner S, Fuchs C. Bayesian inference for diffusion processes: using higher-order approximations for transition densities. Royal Society Open Science. 2020;7(10): 200270.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [40]
  

  2020 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2943872

  Marchi H, Fuchs C. Modelling the impact of spatial proximity on scientific collaboration networks. In: Proceedings of the 35th International Workshop on Statistical Modelling (IWSM) 2020. 2020.

  PUB
   
• [39]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944733

  Radon K, Saathoff E, Pritsch M, et al. Protocol of a population-based prospective COVID-19 cohort study Munich, Germany (KoCo19). BMC Public Health. 2020;20(1): 1036.

  PUB | DOI | WoS | PubMed | Europe PMC | Preprint
   
• [38]
  

  2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2943893

  Becker M, Noll-Puchta H, Amend D, et al. CLUE: a bioinformatic and wet-lab pipeline for multiplexed cloning of custom sgRNA libraries. Nucleic acids research. 2020;48(13).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [37]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2950212

  Fuetterer C, Augustin T, Fuchs C. Adapted single-cell consensus clustering (adaSC3). Advances in Data Analysis and Classification volume. 2020;14(4):885–896.

  PUB | DOI | WoS
   
• [36]
  

  2020 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2943873

  Amrhein L, Fuchs C. Stochastic profiling of mRNA counts using HMC. In: Proceedings of the 35th International Workshop on Statistical Modelling (IWSM) 2020. 2020.

  PUB
   
• [35]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937239

  Tirier SM, Park J, Preusser F, et al. Pheno-seq - linking visual features and gene expression in 3D cell culture systems. Scientific reports. 2019;9(1): 12367.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint
   
• [34]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938376

  Hibbah EH, El Maroufy H, Fuchs C, Ziad T. An MCMC computational approach for a continuous time state-dependent regime switching diffusion process. JOURNAL OF APPLIED STATISTICS. 2019;47:1354-1374.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [33]
  

  2019 | Preprint | Veröffentlicht | PUB-ID: 2944732

  Amrhein L, Harsha K, Fuchs C. A mechanistic model for the negative binomial distribution of single-cell mRNA counts. bioRxiv. 2019.

  PUB | DOI | Preprint
   
• [32]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934063

  Krautenbacher N, Flach N, Bock A, et al. A strategy for high-dimensional multivariable analysis classifies childhood asthma phenotypes from genetic, immunological and environmental factors. Allergy. 2019;74(7):1364-1373.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [31]
  

  2019 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2946521

  Wille K, Stegelmann F, Busen H, et al. Cutaneous adverse events (CAE) in MPN patients with cytoreductive therapy are strongly associated with hydroxyurea (HU): results from a prospective non-interventional study. In: ONCOLOGY RESEARCH AND TREATMENT. Vol 42. Basel: Karger; 2019: 96.

  PUB | WoS
   
• [30]
  

  2019 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2946520

  Wille K, Sadjadian P, Becker T, Kolatzki V, Fuchs C, Griesshammer M. No evidence for Ruxolitinib treatment being a potential risk factor for secondary primary malignancies (SPM) in 201 BCR/ABL-negative myeloproliferative neoplasm patients. In: ONCOLOGY RESEARCH AND TREATMENT. Vol 42. Basel: Karger; 2019: 71.

  PUB | WoS
   
• [29]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936607

  El Omari M, El Maroufy H, Fuchs C. Non parametric estimation for fractional diffusion processes with random effects. STATISTICS. 2019;53(4):753-769.

  PUB | DOI | WoS
   
• [28]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933522

  Wille K, Sadjadian P, Becker T, et al. High risk of recurrent venous thromboembolism in BCR-ABL-negative myeloproliferative neoplasms after termination of anticoagulation. ANNALS OF HEMATOLOGY. 2019;98(1):93-100.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [27]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933094

  Neschen S, Wu M, Fuchs C, et al. Impact of Brain Fatty Acid Signaling on Peripheral Insulin Action in Mice. Experimental and Clinical Endocrinology & Diabetes. 2018;128(01):20-29.

  PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
   
• [26]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933892

  Dirmeier S, Fuchs C, Mueller NS, Theis FJ. netReg: network-regularized linear models for biological association studies. Bioinformatics. 2017;34(5):896-898.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [25]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934011

  Krautenbacher N, Theis FJ, Fuchs C. Correcting Classifiers for Sample Selection Bias in Two-Phase Case-Control Studies. Computational and Mathematical Methods in Medicine. 2017;2017: 7847531.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [24]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934012

  Seyednasrollah F, Koestler DC, Wang T, et al. A DREAM challenge to build prediction models for short-term discontinuation of docetaxel in metastatic castration-resistant prostate cancer patients. JCO Clinical Cancer Informatics. 2017;1(1):1-15.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [23]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934014

  Kondofersky I, Laimighofer M, Kurz C, et al. Three general concepts to improve risk prediction: good data, wisdom of the crowd, recalibration. F1000Research. 2016;5: 2671.

  PUB | DOI
   
• [22]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934015

  Köferle A, Worf K, Breunig C, et al. CORALINA. A universal method for the generation of gRNA libraries for CRISPR-based screening. BMC Genomics. 2016;17(1): 917.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [21]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934017

  Kondofersky I, Theis FJ, Fuchs C. Inferring catalysis in biological systems. IET Systems Biology. 2016;10(6):210-218.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [20]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934013

  Guinney J, Wang T, Laajala TD, et al. Prediction of overall survival for patients with metastatic castration-resistant prostate cancer. Development of a prognostic model through a crowdsourced challenge with open clinical trial data. The Lancet Oncology. 2016;18(1):132-142.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [19]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934021

  Kaufmann S, Fuchs C, Gonik M, Khrameeva EE, Mironov AA, Frishman D. Inter-Chromosomal Contact Networks Provide Insights into Mammalian Chromatin Organization. PLOS ONE. 2015;10(5): e0126125.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [18]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934023

  Sadic D, Schmidt K, Groh S, et al. Atrx promotes heterochromatin formation at retrotransposons. EMBO reports. 2015;16(7):836-850.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [17]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934024

  Illner K, Miettinen J, Fuchs C, et al. Model selection using limiting distributions of second-order blind source separation algorithms. Signal Processing. 2015;113:95-103.

  PUB | DOI | WoS
   
• [16]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934025

  Kondofersky I, Fuchs C, Theis FJ. Identifying latent dynamic components in biological systems. IET Systems Biology. 2015;9(5):193-203.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [15]
  

  2015 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2934045

  Illner K, Fuchs C, Theis FJ. Bayesian blind source separation applied to the lymphocyte pathway. In: Gilli M, ed. 21st International Conference on Computational Statistics (COMPSTAT 2014). Proceedings of COMPSTAT 2014. Red Hook, NJ; 2015: 625-632.

  PUB
   
• [14]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934027

  Illner K, Fuchs C, Theis FJ. Bayesian Blind Source Separation for Data with Network Structure. Journal of Computational Biology. 2014;21(11):855-865.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [13]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934046

  Bajikar SS, Fuchs C, Roller A, Theis FJ, Janes KA. Parameterizing cell-to-cell regulatory heterogeneities via stochastic transcriptional profiles. Proceedings of the National Academy of Sciences. 2014;111(5):E626-E635.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [12]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934029

  Illner K, Fuchs C, Theis FJ. Single-cell analysis. Biology at high resolution. Separation - Science & Applications. 2014;34:24-26.

  PUB
   
• [11]
  

  2014 | Zeitungsartikel | Veröffentlicht | PUB-ID: 2934026

  Illner K, Fuchs C, Theis FJ. Einzelzellanalysen. Biologie in Hochauflösung. GIT Laborportal. 20.10.2014.

  PUB
   
• [10]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934030

  Fuchs C. Mische und herrsche. Zelluläre Genexpression statistisch unterstützt analysieren. Laborpraxis. 2014;2014(5):20-22.

  PUB
   
• [9]
  

  2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934048

  Albrecht E, Waldenberger M, Krumsiek J, et al. Metabolite profiling reveals new insights into the regulation of serum urate in humans. Metabolomics. 2013;10(1):141-151.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [8]
  

  2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934072

  Schneider K, Fuchs C, Dobay A, et al. Dissection of cell cycle–dependent dynamics of Dnmt1 by FRAP and diffusion-coupled modeling. Nucleic Acids Research. 2013;41(9):4860-4876.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [7]
  

  2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934050

  Wahl S, Holzapfel C, Yu Z, et al. Metabolomics reveals determinants of weight loss during lifestyle intervention in obese children. Metabolomics. 2013;9(6):1157-1167.

  PUB | DOI | WoS
   
• [6]
  

  2013 | Monographie | Veröffentlicht | PUB-ID: 2934079

  Fuchs C. Inference for Diffusion Processes. With Applications in Life Sciences. Berlin, Heidelberg: Springer; 2013.

  PUB | DOI
   
• [5]
  

  2012 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2934073

  Illner K, Fuchs C, Theis FJ. Blind source separation using latent Gaussian graphical models. In: Larjo A, Schober S, Farhan M, Bossert M, Yli-Harja O, Tampere International Center for Signal Processing., eds. Ninth International Workshop on Computational Systems Biology, WCSB 2012. Vol TICSP series. Tampere, Finland; 2012: 43-50.

  PUB
   
• [4]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934075

  Treu G, Fuchs F, Dargatz C. Implicit Authorization for Social Location Disclosure. Journal of Software. 2008;3(1):18-26.

  PUB
   
• [3]
  

  2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2934076

  Treu G, Fuchs F, Dargatz C. Implicit Authorization for Accessing Location Data in a Social Context. In: The Second International Conference on Availability, Reliability and Security (ARES'07). Piscataway, NJ: IEEE; 2007: 263-272.

  PUB | DOI
   
• [2]
  

  2006 | Diskussionspapier | Veröffentlicht | PUB-ID: 2934077

  Dargatz C. A Diffusion Approximation for an Epidemic Model. Sonderforschungsbereich 386, Discussion Paper. Vol 517. München: Ludwig-Maximilians-Universität; 2006.

  PUB | DOI
   
• [1]
  

  2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934078

  Dargatz C, Georgescu V, Held L. Stochastic Modelling of the Spatial Spread of Influenza in Germany. Austrian Journal of Statistics. 2005;35(1):5-20.

  PUB | DOI