Tim Wilhelm Nattkemper

tim.nattkemper@uni-bielefeld.de
ORCID logo https://orcid.org/0000-0002-7986-1158

PEVZ-ID
11602

207 Publikationen

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  • [207]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2984580
    A.D. Rogers, et al., “Accelerating ocean species discovery and laying the foundations for the future of marine biodiversity research and monitoring”, Frontiers in Marine Science , vol. 10, 2023, : 1224471.
    PUB | DOI | WoS
     
  • [206]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2981135 OA
    R. van Kevelaer, et al., “A data science approach for multi-sensor marine observatory data monitoring cold water corals (Paragorgia arborea) in two campaigns”, PLOS ONE, vol. 18, 2023, : e0282723.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [205]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979717
    A.W. Momber, et al., “The exploration and annotation of large amounts of visual inspection data for protective coating systems on stationary marine steel structures”, Ocean Engineering, vol. 278, 2023, : 114337.
    PUB | DOI | WoS
     
  • [204]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2969165 OA
    M. Kloster, et al., “Improving deep learning-based segmentation of diatoms in gigapixel-sized virtual slides by object-based tile positioning and object integrity constraint”, PLOS ONE, vol. 18, 2023, : e0272103.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [203]
    2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2968512
    A. Momber, et al., “Eine Online-Plattform für die Verarbeitung digitaler visueller Daten zur Zustandsbeschreibung von Beschichtungssystemen an maritimen Stahlbauten”, Stahlbau , 2023.
    PUB | DOI | WoS
     
  • [202]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965093 OA
    D. Langenkämper, et al., “Exploring time series of hyperspectral images for cold water coral stress response analysis”, PLoS ONE , vol. 17, 2022, : e0272408.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [201]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964556 OA
    M. Tan, D. Langenkämper, and T.W. Nattkemper, “The Impact of Data Augmentations on Deep Learning-Based Marine Object Classification in Benthic Image Transects”, Sensors, vol. 22, 2022, : 5383.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [200]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964311 OA
    K. Tzanakis, et al., “MetHoS: a platform for large-scale processing, storage and analysis of metabolomics data”, BMC Bioinformatics, vol. 23, 2022, : 267.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [199]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2966492 OA
    A.M. Burfeid-Castellanos, et al., “A Digital Light Microscopic Method for Diatom Surveys Using Embedded Acid-Cleaned Samples”, Water, vol. 14, 2022, : 3332.
    PUB | PDF | DOI | Download (ext.) | WoS | Preprint
     
  • [198]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964509
    T. Schoening, et al., “Making marine image data FAIR”, Scientific data, vol. 9, 2022, : 414.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [197]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964756
    T. Schoening, et al., “Publisher Correction: Making marine image data FAIR”, Scientific Data , vol. 9, 2022, : 445.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [196]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2962701
    A.W. Momber, et al., “Corrigendum to “A data-based model for condition monitoring and maintenance planning for protective coating systems for wind tower structures” [Renew. Energy 186 (2022) 957–973]”, Renewable Energy , vol. 188, 2022, pp. 1184.
    PUB | DOI | WoS
     
  • [195]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2960547
    A.W. Momber, et al., “A data-based model for condition monitoring and maintenance planning for protective coating systems for wind tower structures”, Renewable Energy, 2022.
    PUB | DOI
     
  • [194]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959631 OA
    M. Zurowietz and T.W. Nattkemper, “Current Trends and Future Directions of Large Scale Image and Video Annotation: Observations From Four Years of BIIGLE 2.0”, Frontiers in Marine Science, vol. 8, 2021, : 760036.
    PUB | Dateien verfügbar | DOI | Download (ext.) | WoS
     
  • [193]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952736 OA
    M. Canals, et al., “The quest for seafloor macrolitter: a critical review of background knowledge, current methods and future prospects”, Environmental Research Letters , vol. 16, 2021, : 023001.
    PUB | PDF | DOI | WoS
     
  • [192]
    2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2960196
    A.W. Momber, et al., “A Digital Twin concept for the prescriptive maintenance of protective coating systems on wind turbine structures”, Wind Engineering, 2021, : 0309524X211060550.
    PUB | DOI | WoS
     
  • [191]
    2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2949959
    L. Muskat, et al., “Image analysis-based quantification of fungal sporulation by automatic conidia counting and gray value correlation”, MethodsX, 2021, : 101218.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [190]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956291
    A. Momber, et al., “Digitalisierung und Verarbeitung von Sensordaten für die Zustandsbewertung von Oberflächenschutzsystemen stählerner Türme von Onshore-Windenergieanlagen”, Stahlbau, vol. 90, 2021, pp. 528-541.
    PUB | DOI | WoS
     
  • [189]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2951226 OA
    K. Wüllems, et al., “Fast Visual Exploration of Mass Spectrometry Images with Interactive Dynamic Spectral Similarity Pseudocoloring”, Scientific Reports, vol. 11, 2021, : 4606.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [188]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2950877 OA
    T. Möller and T.W. Nattkemper, “ALMI - A Generic Active Learning System for Computational Object Classification in Marine Observation Images”, Sensors, vol. 21, 2021, : 1134.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [187]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942079 OA
    B. Gemeinholzer, et al., “Data storage and data re-use in taxonomy-the need for improved storage and accessibility of heterogeneous data”, ORGANISMS DIVERSITY & EVOLUTION, vol. 20, 2020, pp. 1-8.
    PUB | PDF | DOI | WoS
     
  • [186]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945723 OA
    M. Kloster, et al., “Deep learning-based diatom taxonomy on virtual slides”, Scientific Reports, vol. 10, 2020, : 14416.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [185]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943901 OA
    M. Zurowietz and T.W. Nattkemper, “An Interactive Visualization for Feature Localization in Deep Neural Networks”, Frontiers in Artificial Intelligence - Machine Learning and Artificial Intelligence , vol. 3, 2020, : 49.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [184]
    2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2943127
    A. Miralles, et al., “Repositories for Taxonomic Data: Where We Are and What is Missing.”, Systematic biology, 2020.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [183]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945097 OA
    M. Zurowietz and T.W. Nattkemper, “Unsupervised Knowledge Transfer for Object Detection in Marine Environmental Monitoring and Exploration”, IEEE Access, vol. 8, 2020.
    PUB | PDF | DOI | Download (ext.) | WoS
     
  • [182]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948381
    D. Langenkämper, et al., “Corrigendum: BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections”, Frontiers in Marine Science, vol. 7, 2020, : 617268.
    PUB | DOI | Download (ext.) | WoS
     
  • [181]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944758 OA
    D. Langenkämper, et al., “Gear-Induced Concept Drift in Marine Images and Its Effect on Deep Learning Classification”, Frontiers in Marine Science, vol. 7, 2020, : 506.
    PUB | PDF | DOI | WoS
     
  • [180]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936089 OA
    K. Wüllems, et al., “Detection and visualization of communities in mass spectrometry imaging data.”, BMC Bioinformatics, vol. 20, 2019, : 303.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [179]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936069 OA
    D. Langenkämper, et al., “On the impact of Citizen Science-derived data quality on deep learning based classification in marine images”, PLOS ONE, vol. 14, 2019, : e0218086.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [178]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931637
    T.W. Nattkemper and G. Hattab, “SeeVis — 3D space-time cube rendering for visualization of microfluidics image data”, Bioinformatics, vol. 35, 2019, pp. 1802-1804.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [177]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935488 OA
    J. Osterloff, et al., “Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory.”, Scientific reports, vol. 9, 2019, : 6578.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [176]
    2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2935366
    M. Zurowietz, D. Langenkämper, and T.W. Nattkemper, “BIIGLE2Go - A scalable image annotation system for easy deployment on cruises”, Proceedings of IEEE OCEANS 2019, 2019.
    PUB | DOI | Download (ext.)
     
  • [175]
    2019 | Konferenzbeitrag | Im Druck | PUB-ID: 2937705
    T. Möller, D. Langenkämper, and T.W. Nattkemper, “Wind turbine segmentation performing kNN-clustering on superpixel segmentations”, Image and Signal Processing for Remote Sensing XXV, L. Bruzzone and F. Bovolo, eds., Image and Signal Processing for Remote Sensing XXV. Proceedings, vol. 11155, In Press.
    PUB
     
  • [174]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918218 OA
    G. Hattab, et al., “A Novel methodology for characterizing cell subpopulations in automated time-lapse microscopy”, Frontiers in Bioengineering and Biotechnology, vol. 6, 2018, : 17.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [173]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932066 OA
    M. Zurowietz, et al., “MAIA - A machine learning assisted image annotation method for environmental monitoring and exploration ”, PLoS ONE, vol. 13, 2018, : e0207498.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [172]
    2018 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2921040
    T. Möller, I. Nillsen, and T.W. Nattkemper, “Tracking Sponge Size and Behaviour with Fixed Underwater Observatories”, Pattern Recognition and Information Forensics. ICPR 2018 International Workshops, CVAUI, IWCF, and MIPPSNA, Beijing, China, August 20-24, 2018, Revised Selected Papers, Z. Zhang, et al., eds., Lecture Notes in Computer Science, vol. 11188, Cham: Springer, 2018, pp.45-54.
    PUB | DOI
     
  • [171]
    2018 | Konferenzbeitrag | Angenommen | PUB-ID: 2921039 OA
    D. Langenkämper, R. van Kevelaer, and T.W. Nattkemper, “Strategies for Tackling the Class Imbalance Problem in Marine Image Classification”, Presented at the International Conference on Pattern Recognition 2018, Computer Vision for Automated Analysis of Underwater Imagery Workshop, Beijing, Accepted.
    PUB | PDF
     
  • [170]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911830 OA
    G. Hattab, et al., “ViCAR: An Adaptive and Landmark-Free Registration of Time Lapse Image Data from Microfluidics Experiments”, Frontiers in Genetics, vol. 8, 2017, : 69.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [169]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909190 OA
    D. Langenkämper, et al., “BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections”, Frontiers in Marine Science, vol. 4, 2017, : 83.
    PUB | Dateien verfügbar | DOI | WoS
     
  • [168]
    2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2915349
    T. Möller, I. Nilssen, and T.W. Nattkemper, “Active learning for the classification of species in underwater images from a fixed observatory”, Proceedings of The IEEE International Conference on Computer Vision Workships (ICCVW), Piscataway, NJ: IEEE, 2017, pp.2891-2897.
    PUB
     
  • [167]
    2017 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2908753 OA
    J. Osterloff, et al., “Extracting Scalar Quantities from Underwater Images - a Toolbox for Image Data from Fixed Observatories.”, Presented at the Marine Imaging Workshop 2017, Kiel, 2017.
    PUB | PDF
     
  • [166]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901477
    S.E. Ahmed Raza, et al., “Robust normalization protocols for multiplexed fluorescence bioimage analysis”, BioData Mining, vol. 9, 2016, : 11.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [165]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900943
    D. Langenkämper, et al., “Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations”, Frontiers in Genetics, vol. 7, 2016, : 5.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [164]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903712 OA
    J. Osterloff, et al., “Computational Visual Stress Level Analysis of Calcareous Algae Exposed to Sedimentation”, PLOS ONE, vol. 11, 2016, : e0157329.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [163]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907705
    B. Brink, et al., “Omics Fusion - A Platform for Integrative Analysis of Omics Data”, Journal of Integrative Bioinformatics, vol. 13, 2016, : 296.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [162]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901413 OA
    K. Gorzolka, et al., “Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging”, PLOS ONE, vol. 11, 2016, : e0150208.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [161]
    2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2904671
    T. Möller, I. Nilssen, and T.W. Nattkemper, “Change Detection in Marine Observatory Image Streams using Bi-Domain Feature Clustering”, 2016 23rd International Conference on Pattern Recognition (ICPR), Piscataway, NJ: IEEE, 2016, pp.793-798.
    PUB | DOI
     
  • [160]
    2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2906524
    T. Möller, I. Nilssen, and T.W. Nattkemper, “Data-driven Long Term Change Analysis in Marine Observatory Image Streams”, 2016 ICPR 2nd Workshop on Computer Vision for Analysis of Underwater Imagery (CVAUI 2016) . Proceedings, Piscataway, NJ: IEEE, 2016, pp.13-18.
    PUB
     
  • [159]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902750 OA
    T. Schoening, J. Osterloff, and T.W. Nattkemper, “RecoMIA - Recommendations for marine image annotation: Lessons learned and future directions”, Frontiers in Marine Science, vol. 3, 2016, : 59.
    PUB | PDF | DOI | WoS
     
  • [158]
    2016 | Konferenzbeitrag | Angenommen | PUB-ID: 2904670
    D. Langenkämper and T.W. Nattkemper, “COATL - A Learning Architecture for Online Real-Time Detection and Classification Assistance for Environmental Data”, Proceedings of the International Conference on Pattern Recognition (ICPR), Accepted.
    PUB
     
  • [157]
    2016 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2903653
    J. Durden, et al., “Perspectives in Visual Imaging for Marine Biology and Ecology: From Acquisition to Understanding”, Oceanography and Marine Biology: An Annual Review, R.N. Hughes, et al., eds., 54, Boca Raton: CRC Press, 2016, pp.1-72.
    PUB | WoS
     
  • [156]
    2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2903711
    J. Osterloff, I. Nilssen, and T.W. Nattkemper, “Computational Coral Feature Monitoring for the fixed underwater Observatory LoVe”, Proceedings of IEEE OCEANS 2016, 2016.
    PUB | DOI
     
  • [155]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903363
    J.M. Durden, et al., “Comparison of image annotation data generated by multiple investigators for benthic ecology”, Marine Ecology Progress Series, vol. 552, 2016, pp. 61-70.
    PUB | DOI | WoS
     
  • [154]
    2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2906522
    J. Osterloff, et al., “Polyp activity estimation and monitoring for cold water corals with a deep learning approach”, Proceedigs of CVAUI 2016 (ICPR Workshop), 2016.
    PUB | DOI
     
  • [153]
    2016 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2902749
    J. Osterloff, I. Nilssen, and T.W. Nattkemper, “A computer vision approach for monitoring the spatial and temporal shrimp distribution at the LoVe observatory”, Methods in Oceanography, vol. 15-16, 2016, pp. 114-128.
    PUB | DOI
     
  • [152]
    2016 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2902857
    T. Schoening, et al., “Fully automated image segmentation for benthic resource assessment of poly-metallic nodules”, Methods in Oceanography, vol. 15-16, Accepted, pp. 78-89.
    PUB | DOI
     
  • [151]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905905
    J. Nuno Gomes-Pereira, et al., “Current and future trends in marine image annotation software”, Progress in Oceanography, vol. 149, 2016, pp. 106-129.
    PUB | DOI | WoS
     
  • [150]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722138 OA
    N. Kessler, et al., “Learning to classify organic and conventional wheat - a machine-learning driven approach using the MeltDB 2.0 metabolomics analysis platform”, Frontiers in Bioinformatics and Computational Biology, vol. 3, 2015, : 35.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [149]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2724431 OA
    T. Schoening, et al., “DELPHI - fast and adaptive computational laser point detection and visual footprint quantification for arbitrary underwater image collections”, Frontiers in Marine Science, vol. 2, 2015, : 20.
    PUB | PDF | DOI | WoS
     
  • [148]
    2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2775951 OA
    T. Möller, et al., “Change Detection in underwater time laps videos from stationary observatories”, Presented at the GEOHAB, Salvador, Brazil, 2015.
    PUB | PDF
     
  • [147]
    2015 | Datenpublikation | PUB-ID: 2777409 OA
    J.-P. Schlueter, et al., Phase Contrast and Fluorescence Bacterial Time-Lapse Microscopy Image Data, Bielefeld University, 2015.
    PUB | Dateien verfügbar | DOI
     
  • [146]
    2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2775956 OA
    B. Steinbrink, et al., “Integrated Digital Marine Image Analysis and Management - new solutions to handle large image collections in environmental monitoring and exploration”, Presented at the GEOHAB, Salvador, Brazil, 2015.
    PUB | PDF
     
  • [145]
    2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2735538 OA
    J. Osterloff, et al., “Computational analysis of spatial species distribution for integrated stationary environmental monitoring”, Presented at the Geohab 2015, Salvador, Bahia, Brazil, 2015.
    PUB | PDF
     
  • [144]
    2015 | Konferenzbeitrag | Im Druck | PUB-ID: 2775947
    T. Schoening, et al., “Rapid image processing and classification in underwater exploration using advanced high performance computing”, Proc. of the IEEE Oceans, Washington DC, USA: IEEE, In Press.
    PUB
     
  • [143]
    2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2655889
    J. Osterloff, et al., “An overview and rating of benthic image pre-processings for color constancy”, Presented at the Marine Imaging Workshop, National Oceanography Centre, Southampton, UK, 2014.
    PUB
     
  • [142]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705712 OA
    D. Langenkämper, A. Goesmann, and T.W. Nattkemper, “AKE - The Accelerated k-mer Exploration Web-Tool for Rapid Taxonomic Classification and Visualization”, BMC Bioinformatics, vol. 15, 2014, : 384.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [141]
    2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656048 OA
    T. Möller, I. Nilssen, and T.W. Nattkemper, “Introduction of image-based water transparency descriptors to quantify marine snow and turbidity features. A study with data from a stationary observatory”, Presented at the MIW 2014 - Marine Imaging Workshop, Southampton, 2014.
    PUB | PDF
     
  • [140]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2706029 OA
    N. Kessler, et al., “ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and Mass Isotopomer Ratio Analysis”, PLoS ONE, vol. 9, 2014, : e113909.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [139]
    2014 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2683648
    J. Osterloff, et al., “Ranking Color Correction Algorithms using Cluster Indices”, Presented at the ICPR Workshop on Computer Vision for Analysis of Underwater Imagery, Stockhom, 2014.
    PUB | DOI | Download (ext.)
     
  • [138]
    2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2690300
    J. Kölling, M. Zurowietz, and T.W. Nattkemper, “Interactive Exploration of Spatial Distribution in Mass Spectrometry Imaging”, Presented at the 4th Symposium on Biological Data Visualization (BioVis), Boston, MA, USA, 2014.
    PUB | Download (ext.)
     
  • [137]
    2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2676320 OA
    J. Osterloff, et al., “Automated Image based Biomass Quantification in Mesocosm Studies”, Presented at the Geohab 2014, Lorne, Victoria, Australia, 2014.
    PUB | PDF
     
  • [136]
    2014 | Konferenzbeitrag | Im Druck | PUB-ID: 2690335
    M. Rathke, et al., “Interactive and dynamic web-based visual exploration of high dimensional bioimages with real time clustering”, Presented at the German Conference on Bioinformatics (GCB), Bielefeld, Germany, In Press.
    PUB
     
  • [135]
    2014 | Kurzbeitrag Konferenz / Poster | Im Druck | PUB-ID: 2690436 OA
    J. Kölling, et al., “Spatio-temporal analysis of metabolite profiles during barley germination”, Presented at the German Conference on Bioinformatics (GCB), Bielefeld, Germany, In Press.
    PUB | PDF
     
  • [134]
    2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2690322
    J. Kölling, M. Zurowietz, and T.W. Nattkemper, “Interactive Exploration of Spatial Distribution in Mass Spectrometry Imaging”, Presented at the 22nd Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA, USA, ISCB, 2014.
    PUB | Download (ext.)
     
  • [133]
    2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2676334
    T. Möller, et al., “Novelty detection in time lapse image data”, Presented at the Geohab 2014, Lorne, Victoria, Australia, 2014.
    PUB
     
  • [132]
    2014 | Konferenzband | Veröffentlicht | PUB-ID: 2901695
    R. Giegerich, R. Hofestädt, and T.W. Nattkemper, eds., “German Conference on Bioinformatics 2014”, GI-Edition: lecture notes in informatics, vol. 235, 2014.
    PUB
     
  • [131]
    2014 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2717407
    T. Schoening, T. Kuhn, and T.W. Nattkemper, “Seabed Classification Using a Bag-of-Prototypes Feature Representation”, Computer Vision for Analysis of Underwater Imagery (CVAUI), 2014 ICPR Workshop on, 2014, pp.17-24.
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    2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2775961
    T. Schoening, et al., “Image-based marine resource exploration and biodiversity assessment with MAMAS (Marine data Asset Management and Analysis System)”, Presented at the UMI (Underwater Mining Institute), Lisbon, Portugal, 2014.
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2610505
    A. Purser, et al., “Microhabitat and shrimp abundance within a Norwegian cold-water coral ecosystem”, Biogeosciences, vol. 10, 2013, pp. 5779-5791.
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    2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2610134
    T. Schoening, et al., “Ultra-fast segmentation and quantification of poly-metallic nodule coverage in high-resolution digital images”, Proceedings of the UMI 2013, In Press.
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    2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2537912
    C.C. Rubiano Castellanos, T. Merkle, and T.W. Nattkemper, “Using random forest to find Nuclear Export Signals (NESs) in proteins of Arabidopsis thaliana”, Presented at the BIOINFORMATICS Conf., Barcelona, Spain, In Press.
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    2013 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656054
    T. Schoening, M. Bergmann, and T.W. Nattkemper, “A machine-learning system for the automated detection of megafauna and its applicability unseen footage”, Presented at the GEOHAB, Rome, 2013.
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2625914
    T. Bergmann, et al., “Categorization of two-photon microscopy images of human cartilage into states of osteoarthritis”, Osteoarthritis And Cartilage, vol. 21, 2013, pp. 1074-1082.
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    2013 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2610762
    T.W. Nattkemper, “Cluster Analysis”, Encyclopedia of Systems Biology, W. Dubitzky, et al., eds., New York, NY : Springer, 2013.
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    2013 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656093
    T. Kuhn, et al., “Application of Hydro-Acoustic and Video Data for the Exploration of Manganese Nodule Fields”, Presented at the ISOPE OMS, Szczecin, Poland, 2013.
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2610129
    N. Kessler, et al., “MeltDB 2.0 - Advances of the metabolomics software system”, Bioinformatics, vol. 29, 2013, pp. 2452-2459.
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2542584
    C. Held, et al., “Approaches to automatic parameter fitting in a microscopy image segmentation pipeline: An exploratory parameter space analysis”, Journal of Pathology Informatics, vol. 4, 2013, : 5.
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    2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2538625
    A. Bonte, et al., “Einsatz von Protein- und Metabolit-Profiling-Methoden zur Unterscheidung von ökologischem und konventionellem Weizen”, Presented at the 12. Wissenschaftstagung Ökologischer Landbau „Ideal und Wirklichkeit – Perspektiven Ökologischer Landbewirtschaftung“, Bonn, Germany, In Press.
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    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2494458 OA
    T. Schoening, et al., “Semi-automated image analysis for the assessment of megafaunal densities at the Arctic deep-sea observatory HAUSGARTEN”, PLoS ONE, vol. 7, 2012, : e38179.
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    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2455753 OA
    S.-E.-A. Raza, et al., “RAMTaB: Robust Alignment of Multi-Tag Bioimages”, PLoS ONE, vol. 7, 2012, : e30894.
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    2012 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656105
    M. Figueiredo Creed, et al., “Effects of drill cuttings on a deep water rhodolith bed: an integrated approach”, Presented at the V International Rhodolith Workshop, Granada, Spain, 2012.
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    2012 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2656050
    T. Schoening, T. Kuhn, and T.W. Nattkemper, “Estimation of poly-metallic nodule coverage in benthic images”, Proc. of the 41st Conference of the Underwater Mining Institute (UMI), 2012.
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    2012 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656067
    T. Schoening, et al., “The impact of experts’ inter- and intra-observer agreements on computational object classification in images from the deep seafloor of the HAUSGARTEN observatory.”, Presented at the 13th International Deep-Sea Biology Symposium, Wellington, New Zealand, 2012.
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    2012 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2515687 OA
    J. Kölling, et al., “Analyzing Multi-Tag Bioimages with BIOIMAX colocation mining tools”, Presented at the IEEE International Symposium on BIOMEDICAL IMAGING (ISBI), Barcelona, 2012.
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    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498232
    C. Trötschel, et al., “Protein turnover quantification in a multi-labeling approach - from data calculation to evaluation”, Molecular & Cellular Proteomics, vol. 11, 2012, pp. 512-526.
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    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2536156
    L. Zhou, et al., “Re-Expression of IGF-II Is Important for Beta Cell Regeneration in Adult Mice”, PLoS ONE, vol. 7, 2012, : e43623.
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    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2481783 OA
    J. Kölling, et al., “WHIDE - A web tool for visual data mining colocation patterns in multivariate bioimages”, Bioinformatics, vol. 28, 2012, pp. 1143-1150.
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  • [110]
    2012 | Konferenzbeitrag | Im Druck | PUB-ID: 2515596 OA
    T.W. Nattkemper, “Are we ready for Science 2.0?”, Presented at the 4th International Conference on Knowledge Management and Information Sharing (KMIS), Barcelona, In Press.
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    2012 | Konferenzbeitrag | PUB-ID: 2515700
    T. Schoening, et al., “Investigation of hidden parameters influencing the automated object detection in benthic images”, Presented at the IEEE OCEANS 2012 MTS/IEEE, Hampton Roads, Virginia, USA, 2012.
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    2012 | Konferenzbeitrag | PUB-ID: 2515671
    C. Held, T.W. Nattkemper, and T. Wittenberg, “Approaches to automatic parameter fitting in a microscopy image segmentation pipeline: An exploratory parameter space analysis”, Presented at the Histopathology Image Analysis (HIMA) workshop at MICCAI 2012, Nizza, 2012.
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300114
    C. Loyek, et al., “Web2.0 paves new ways for collaborative and exploratory analysis of Chemical Compounds in Spectrometry Data”, Journal of Integrative Bioinformatics, vol. 8, 2011, pp. 158.
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300063 OA
    S. Albaum, et al., “A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study”, Proteome Science, vol. 9, 2011, : 30.
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300073 OA
    C. Martin, et al., “A Normalized Tree Index for identification of correlated clinical parameters in microarray data”, BioData Mining, vol. 4, 2011, : 2.
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300082 OA
    C. Loyek, et al., “BIOIMAX - A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data”, BMC Bioinformatics, vol. 12, 2011, : 297.
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300092
    M. Bergmann, et al., “Megafaunal assemblages from two shelf stations west of Svalbard”, Marine Biology Research, vol. 7, 2011, pp. 525-539.
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    2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300232 OA
    C. Loyek, et al., “A Web2.0 Strategy for the Collaborative Analysis of Complex Bioimages”, Advances in Intelligent Data Analysis X: 10th International Symposium, IDA 2011, Porto, Portugal, October 29-31, 2011. Proceedings, J. Gama, E. Bradley, and J. Hollmén, eds., Lecture Notes in Computer Science, vol. 7014, Berlin, Heidelberg: Springer, 2011, pp.258-269.
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    2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300237 OA
    D. Langenkämper, et al., “Towards Protein Network Analysis using TIS Imaging and Exploratory Data Analysis”, Presented at the Workshop on Computational Systems Biology (WCSB), Zürich, Switzerland, 2011.
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    2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656082
    A. Purser, et al., “How to squeeze even more from your Terabytes of video data!”, Hermione Newsletter, 2011.
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    2011 | Konferenzbeitrag | Im Druck | PUB-ID: 2315356
    T. Bergmann, et al., “Categorization of 2-photon microscopy images of human articular cartilage into states of arthritis”, Presented at the Tagung der Biomedizinischen Technik (BMT), Freiburg, Germany, Freiburg, Germany: In Press.
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2373808
    J. Herold, C. Loyek, and T.W. Nattkemper, “Multivariate Image Mining”, Wiley Interdisciplinary Reviews: DATA MINING AND KNOWLEDGE DISCOVERY, vol. 1, 2011, pp. 2-13.
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300102
    M. Arif, et al., “Quantification of Cell Infection Caused by Listeria monocytogenes Invasion”, Journal of Biotechnology, vol. 154, 2011, pp. 76-83.
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    2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2323705 OA
    D. Langenkämper, et al., “TICAL - a web-tool for multivariate image clustering and data topology preserving visualization”, Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany, 2011.
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093532
    A. Scherbart and T.W. Nattkemper, “Looking inside self-organizing map ensembles with resampling and negative correlation learning”, Neural Networks, vol. 24, 2011, pp. 130-141.
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    2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300235
    T. Schoening, V. Hans, and T.W. Nattkemper, “Towards improved epilepsia diagnosis by unsupervised segmentation of neuropathology tissue sections using Ripley’s-L features”, Bildverarbeitung für die Medizin 2011:Algorithmen - Systeme - Anwendungen Proceedings des Workshops vom 20. - 22. März 2011 in Lübeck, Informatik aktuell, Berlin, Heidelberg: Springer, 2011, pp.44-48.
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    2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929340
    S. Burgemeister, et al., “CellViCAM-Cell viability classification for animal cell cultures using dark field micrographs”, JOURNAL OF BIOTECHNOLOGY, vol. 149, 2010, pp. 310-316.
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    2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1794419
    J. Herold, et al., “Integrating semantic annotation and information visualization for the analysis of multichannel fluorescence micrographs from pancreatic tissue”, Computerized Medical Imaging and Graphics, vol. 34, 2010, pp. 446-452.
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    2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929311
    A. Gölzhäuser, et al., “BioImaging: Contributions from biology, physics and informatics”, Journal of Biotechnology, vol. 149, 2010, pp. 227-228.
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    2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929335
    J. Herold, W. Schubert, and T.W. Nattkemper, “Automated detection and quantification of fluorescently labeled synapses in murine brain tissue sections for high throughput applications”, JOURNAL OF BIOTECHNOLOGY, vol. 149, 2010, pp. 299-309.
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    2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018390
    J. Herold, et al., “A way towards analyzing high-content bioimage data by means of semantic annotation and visual data mining”, SPIE Medical Imaging, SPIE, 2009.
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    2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018422
    J. Ontrup, et al., “BIIGLE - Web 2.0 enabled labelling and exploring of images from the Arctic deep-sea observatory HAUSGARTEN”, OCEANS 2009 - Europe, Bremen: 2009.
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    2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018427
    H. Qureshi, et al., “A Robust Adaptive Wavelet-based Method for Classification of Meningioma Histology Images”, MICCAI«2009 Workshop on Optical Tissue Image Analysis in Microscopy, Histology, and Endoscopy, 2009.
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    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635314 OA
    N.N. Diaz, et al., “TACOA - Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach”, BMC Bioinformatics, vol. 10, 2009, pp. 56.
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    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589531
    S. Albaum, et al., “Qupe-a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments”, Bioinformatics, vol. 25, 2009, pp. 3128-3134.
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    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588783
    A. Purser, et al., “Use of machine-learning algorithms for the automated detection of cold-water coral habitats: a pilot study”, Marine Ecology Progress Series, vol. 397, 2009, pp. 241-251.
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    2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1591448
    A. Saalbach, et al., “On the application of (topographic) independent and tree-dependent component analysis for the examination of DCE-MRI data”, Biomedical Signal Processing and Control, BIOMEDICAL SIGNAL PROCESSING AND CONTROL, vol. 4, ELSEVIER SCI LTD, 2009, pp.247-253.
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    2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018440
    T. Schoening, et al., “BIIGLE Tools - A Web 2.0 Approach for Visual Bioimage Database Mining”, IV 09 - Intl. Conference on Information Visualization, IEEE, 2009.
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    2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018405
    C. Loyek, F.G. Woermann, and T.W. Nattkemper, “Detection of Focal Cortical Dysplasia in MRI Using Textural Features”, Proceedings of BVM 2008, T. Tolxdorff, ed., Informatik aktuell, Berlin, Heidelberg: Springer Verlag, 2008, pp.432-436.
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    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636280 OA
    W. Timm, et al., “Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics”, BMC Bioinformatics, vol. 9, 2008, pp. 443.
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    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585611 OA
    N. Wei, et al., “A machine vision system for automated non-invasive assessment of cell viability via dark field microscopy, wavelet feature selection and classification”, BMC Bioinformatics, vol. 9, 2008, pp. 449.
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    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587052
    C. Martin, et al., “Hyperbolic SOM-based clustering of DNA fragment features for taxonomic visualization and classification”, Bioinformatics, vol. 24, 2008, pp. 1568-1574.
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    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588286
    T. Twellmann, et al., “Model-free visualization of suspicious lesions in breast MRI based on supervised and unsupervised learning”, ENGINEERING APPLICATIONS OF ARTIFICIAL INTELLIGENCE, vol. 21, 2008, pp. 129-140.
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    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783364 OA
    L. Krause, et al., “Phylogenetic classification of short environmental DNA fragments”, Nucleic Acids Research, vol. 36, 2008, pp. 2230-2239.
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    2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018409
    C. Martin and T.W. Nattkemper, “A Tree Index to Support Clustering Based Exploratory Data Analysis”, Bioinformatics Research and Development : Second International Conference, BIRD 2008 Vienna, Austria, July 7-9, 2008 Proceedings, Communications in Computer and Information Science, vol. 13, Berlin, Heidelberg: Springer, 2008, pp.1-15.
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    2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018435
    A. Scherbart, et al., “Improved Mass Spectrometry Peak Intensity Prediction by Adaptive Feature Weighting”, International Conference on Neural Information Processing, Auckland, New Zealand: 2008.
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    2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018381
    S. Albaum, et al., “ProSE - "Software as a Service" for Quantitative Proteomics (Poster abstract)”, HUPO 7th Annual World Congress, 2008.
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    2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018398
    J. Herold, et al., “Flexible Synapse Detection in Fluorescence Micrographs by Modeling Human Expert Grading”, Proc. of 2008 IEEE International Symposium on Biomedical Imaging, 2008.
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    2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018432
    A. Scherbart and T.W. Nattkemper, “The Diversity of Regression Ensembles Combining Bagging and Random Subspace Method”, International Conference on Neural Information Processing, 2008.
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    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630738
    N. Pobigaylo, et al., “Identification of genes relevant to symbiosis and competitiveness in Sinorhizobium meliloti using signature-tagged mutants”, MOLECULAR PLANT-MICROBE INTERACTIONS, vol. 21, 2008, pp. 219-231.
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    2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018412 OA
    C. Martin, et al., “Genome feature exploration using hyperbolic Self-Organizing Maps”, Proceedings of the 6th International Workshop on Self-Organizing Maps (WSOM 2007), Bielefeld: Bielefeld University, 2007.
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    2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714045 OA
    A. Scherbart, et al., “SOM-based Peptide Prototyping for Mass Spectrometry Peak Intensity Prediction”, Proceedings of the 6th Workshop on Self-Organizing Maps (WSOM 07), Bielefeld: Bielefeld University, 2007.
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    2007 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2714002
    B. Lessmann, et al., “Use of automated image analysis to detect changes in megafaunal densities at HAUSGARTEN (79°N west off Svalbard) between 2002 and 2004”, Presented at the EMBS - 42nd European Marine Biology Symposium, Kiel, Germany, 2007.
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    2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2714021
    T.W. Nattkemper, A. Degenhard, and T. Twellmann, “Breast Tumor Classification and Visualization with Machine-Learning Approaches”, Cancer Imaging - Lung and breast carcinomas, M.A. Hayat, ed., vol. 1, Amsterdam : Academic Press, 2007, pp.309-321.
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    2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2714040
    A. Scherbart, et al., “Neural Network Approach for Mass Spectrometry Prediction by Peptide Prototyping”, Artificial Neural Networks – ICANN 2007 - 17th International Conference, Porto, Portugal, September 9-13, 2007, Proceedings, Part II, J.M. Sá de, ed., Lecture Notes in Computer Science, vol. 4669, Berlin: Springer, 2007, pp.90-99.
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    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714032
    B. Lessmann, et al., “Multiscale Analysis of MR Mammography Data”, Zeitschrift für Medizinische Physik (german journal of medical physics), vol. 17, 2007, pp. 166-171.
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    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595739
    N. Wei, et al., “In situ dark field microscopy for on-line monitoring of yeast cultures”, BIOTECHNOLOGY LETTERS, vol. 29, 2007, pp. 373-378.
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    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593120
    N. Wei, et al., “An in situ probe for on-line monitoring of cell density and viability on the basis of dark field microscopy in conjunction with image processing and supervised machine learning”, Biotechnology and Bioengineering, vol. 97, 2007, pp. 1489-1500.
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    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630749
    B. Lessmann, et al., “A method for linking computed image features to histological semantics in neuropathology”, Journal of Biomedical Informatics, vol. 40, 2007, pp. 631-641.
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    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783345 OA
    L. Krause, et al., “GISMO - gene identification using a support vector machine for ORF classification”, Nucleic Acids Research, vol. 35, 2007, pp. 540-549.
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    2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2018416
    T.W. Nattkemper, A. Degenhard, and T. Twellmann, “Breas”, Cancer Imaging - Lung and breast carcinomas, M.A. Hayat, ed., vol. 1, Academic Press, 2007, pp.309-324.
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    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714075
    H. Deters grosse, W. Timm, and T.W. Nattkemper, “REEFSOM - A Metaphoric Data Display for Exploratory Data Mining : journal of new media in neural and cognitive science and education”, Brains, Minds and Media, vol. 2, 2006.
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    2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374232
    C. Varini, et al., “Visual Exploration of Pathology Images by a Discrete Wavelet Transform Preprocessed Locally Linear Embedding.”, Bildverarbeitung für die Medizin, H. Handels, et al., eds., Informatik aktuell, Berlin : Springer, 2006, pp.66-70.
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    2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714148
    T. Twellmann, et al., “Visualizations of Suspicious Lesions in Breast MRI Based on Intelligent Neural Systems”, Intelligent Computing: Theory and Applications IV, Proceedings of SPIE, vol. 6229, San Diego, CA: SPIE, 2006.
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    2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374254
    B. Lessmann, et al., “Content Based Image Retrieval for Dynamic Time Series Data”, Proceedings of BVM, 2006, pp.61-65.
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    2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374494
    W. Timm, et al., “Peak intensity prediction for pmf mass spectra using support vector regression”, Proc. of the 7th International FLINS Conference on Applied Artificial Intelligence, WORLD SCIENTIFIC, 2006, pp.565-572.
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    2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714060
    B. Lessmann, et al., “Feature space exploration of pathology images using Content-Based Database Visualization”, Medical Imaging 2006: Image Processing, Proceedings of SPIE, vol. 6144, San Diego, CA: SPIE, 2006.
    PUB | DOI
     
  • [52]
    2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714065
    C. Varini, A. Degenhard, and T.W. Nattkemper, “Histologic Characterization of DCE-MRI Tumors with Dimensional Data Reduction”, Medical Imaging 2006: Image Processing, Proceedings of SPIE, vol. 6144, San Diego, CA: SPIE, 2006.
    PUB | DOI
     
  • [51]
    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600329
    G. Miksch, et al., “A rapid reporter system using GFP as a reporter protein for identification and screening of synthetic stationary-phase promoters in Escherichia coli”, APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, vol. 70, 2006, pp. 229-236.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [50]
    2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1597259
    C. Martin, H. grosse Deters, and T.W. Nattkemper, “Fusing biomedical multi-modal data for exploratory data analysis”, ARTIFICIAL NEURAL NETWORKS - ICANN 2006, PT 2, S. Kollias, ed., vol. 4132, Berlin, Heidelberg: SPRINGER-VERLAG BERLIN, 2006, pp.798-807.
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    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598838
    N. Pobigaylo, et al., “Construction of a large signature-tagged mini-Tn5 transposon library and its application to mutagenesis of Sinorhizobium meliloti”, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, vol. 72, 2006, pp. 4329-4337.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [48]
    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596731
    C. Varini, A. Degenhard, and T.W. Nattkemper, “Visual exploratory analysis of DCE-MRI data in breast cancer by dimensional data reduction: A comparative study”, BIOMEDICAL SIGNAL PROCESSING AND CONTROL, vol. 1, 2006, pp. 56-63.
    PUB | DOI | WoS
     
  • [47]
    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598535
    C. Varini, A. Degenhard, and T.W. Nattkemper, “ISOLLE: LLE with geodesic distance”, NEUROCOMPUTING, vol. 69, 2006, pp. 1768-1771.
    PUB | DOI | WoS
     
  • [46]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603560
    T.W. Nattkemper, et al., “Evaluation of radiological features for breast tumour classification in clinical screening with machine learning methods”, ARTIFICIAL INTELLIGENCE IN MEDICINE, vol. 34, 2005, pp. 129-139.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714153
    B. Lessmann, et al., “Clustering approach for wavelet transformed MR image data”, Proceedings of the 14th International Conference of Medical Physics, 2005, pp.1412.
    PUB
     
  • [44]
    2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714331
    A. Saalbach, T. Twellmann, and T.W. Nattkemper, “Spectral Clustering for Data Categorization based on Self-Organizing Maps”, Applications of Neural Networks and Machine Learning in Image Processing IX, N. Nasser M., ed., vol. 5673, San Jose, CA: 2005, pp.12-18.
    PUB
     
  • [43]
    2005 | Monographie | PUB-ID: 2714309
    F. Bettenworth, et al., An Online Monitoring System for the Screening of Stationary-Phase Promoters in E. Coli using GFP as a Reporter Protein, 2005.
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  • [42]
    2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374666
    T. Twellmann, et al., “An Adaptive Colour Scale for Comparison of Pseudo Colouring Techniques for DCE-MRI Data”, Presented at the Workshop für Bildverarbeiteung für die Medzin, Workshop für Bildverarbeituing für die Medizin 2005, 2005.
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    2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374546
    A. Saalbach, et al., “A hyperbolic topographic mapping for proximity data”, Proc. of the IASTED International Conference of Artificial Intelligence and Applications, vol. 2005, 2005, pp.106-111.
    PUB
     
  • [40]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714263
    T. Twellmann, O. Lichte, and T.W. Nattkemper, “An Adaptive Tissue Characterisation Network for Model-Free Visualisation of Dynamic Contrast-Enhanced Magnetic Resonance Image Data”, IEEE Transactions on Medical Imaging, vol. 24, 2005, pp. 1256-1266.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [39]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714340
    T.W. Nattkemper and A. Wismüller, “Tumour feature analysis with unsupervised machine learning”, Medical Image Analysis, vol. 9, 2005, pp. 344-351.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [38]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2374187
    A. Saalbach, et al., “Image fusion based on topographic mappings using the hyperbolic space”, Information Visualization, vol. 4, 2005, pp. 266-275.
    PUB | DOI
     
  • [37]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603030
    T.W. Nattkemper and A. Wismuller, “Tumor feature visualization with unsupervised learning”, MEDICAL IMAGE ANALYSIS, vol. 9, 2005, pp. 344-351.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [36]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946602
    N. Wei, et al., “Reagent-free automatic cell viability determination using neural networks based machine vision and dark-field microscopy in Saccharomyces cerevisiae”, Conf Proc IEEE Eng Med Biol Soc, vol. 6, 2005, pp. 6305-6308.
    PUB | DOI | PubMed | Europe PMC
     
  • [35]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602344
    K. Prank, et al., “Machine learning approaches for phenotype-genotype mapping: predicting heterozygous mutations in the CYP21B gene from steroid profiles”, EUROPEAN JOURNAL OF ENDOCRINOLOGY, vol. 153, 2005, pp. 301-305.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [34]
    2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601519
    C. Varini, A. Degenhard, and T.W. Nattkemper, “ISOLLE: Locally linear embedding with geodesic distance”, KNOWLEDGE DISCOVERY IN DATABASES: PKDD 2005, A. Jorge, ed., Lecture notes in computer science ; 3721 : Lecture notes in artificial intelligence, vol. 3721, Berlin, Heidelberg: SPRINGER-VERLAG BERLIN, 2005, pp.331-342.
    PUB | DOI | WoS
     
  • [33]
    2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601848
    G. Miksch, et al., “Libraries of synthetic stationary-phase and stress promoters as a tool for fine-tuning of expression of recombinant proteins in Escherichia coli”, Journal of Biotechnology, JOURNAL OF BIOTECHNOLOGY, vol. 120, ELSEVIER SCIENCE BV, 2005, pp.25-37.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [32]
    2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601906
    B. Lessmann, et al., “SOM-based wavelet filtering for the exploration of medical images”, ARTIFICIAL NEURAL NETWORKS: BIOLOGICAL INSPIRATIONS - ICANN 2005, PT 1, PROCEEDINGS, W. Duch, ed., Lecture notes in computer science, vol. 3696, Berlin, Heidelberg: SPRINGER-VERLAG BERLIN, 2005, pp.671-676.
    PUB | DOI | WoS
     
  • [31]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602177
    T. Twellmann, O. Lichte, and T.W. Nattkemper, “An adaptive tissue characterization network for model-free visualization of dynamic contrast-enhanced magnetic resonance image data”, IEEE TRANSACTIONS ON MEDICAL IMAGING, vol. 24, 2005, pp. 1256-1266.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [30]
    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1666510 OA
    T. Twellmann, et al., “Image fusion for dynamic contrast enhanced magnetic resonance imaging”, Biomed Eng Online, vol. 3, 2004, : 35.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [29]
    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946892
    T.W. Nattkemper, “Automatic segmentation of digital micrographs: a survey”, Stud Health Technol Inform, vol. 107, 2004, pp. 847-851.
    PUB | PubMed | Europe PMC
     
  • [28]
    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946838
    T. Twellmann, et al., “Detection of suspicious lesions in dynamic contrast enhanced MRI data”, The 26th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, vol. 1, 2004, pp. 454-457.
    PUB | PubMed | Europe PMC
     
  • [27]
    2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714397
    T. Kämpfe, T.W. Nattkemper, and H. Ritter, “AQUISAR: Image Retrieval in Underwater Webcam Images”, WIAMIS 2004 : 5th International Workshop on Image Analysis for Multimedia Interactive Services, Lisboa, Portugal: 2004.
    PUB
     
  • [26]
    2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714346
    B. Lessmann, et al., “Wavelet features for improved tumour detection in DCE-MRI”, Proceedings of Medical Image Understanding and Analysis (MIUA), D. Rueckert, J. Hajnal, and G.-Z. Yang, eds., London, UK: BMVA, 2004, pp.93-96.
    PUB
     
  • [25]
    2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714369
    C. Varini, et al., “Breast MRI data analysis by LLE”, Proceedings of International Joint Conference on Neural Networks, vol. 3, Montreal, Canada: IEEE, 2004, pp.2449-2554.
    PUB | DOI
     
  • [24]
    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714465
    T.W. Nattkemper, “Multivariate image analysis in biomedicine: a methodological review”, Journal of Biomedical Informatics, vol. 37, 2004, pp. 380-391.
    PUB
     
  • [23]
    2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714382
    A. Saalbach, et al., “Visualization of Multivariate Image Data using Image Fusion and Perceptually Optimized Color Scales based on sRGB”, Medical Imaging 2004: Visualization, Image-Guided Procedures, and Display, J. Robert L. Galloway, ed., Proceedings of SPIE, vol. 5367, San Diego, CA: SPIE, 2004.
    PUB | DOI
     
  • [22]
    2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2375262
    C. Varini, et al., “Visualisation of Breast Tumour DCE-MRI Data using LLE”, Proc. Medical Image Understanding and Analysis (MIUA), BMVA, 2004, pp.97-100.
    PUB
     
  • [21]
    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606041
    T.W. Nattkemper, “Multivariate image analysis in biomedicine”, JOURNAL OF BIOMEDICAL INFORMATICS, vol. 37, 2004, pp. 380-391.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [20]
    2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2017550 OA
    T.W. Nattkemper, et al., “A Hybrid System for Cell Detection in Digital Micrographs”, Biomedical Engineering, Proc., B. Tilg, ed., vol. 417, Innsbruck, Austria: ACTA Press, 2004.
    PUB | PDF
     
  • [19]
    2003 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2017545 OA
    T.W. Nattkemper, et al., “Look & Listen: Sonification and Visualization of Multiparameter Micrographs”, Engineering in Medicine and Biology Society. Proceedings of the 25th Annual International Conference of the IEEE, vol. 2, Cancun, Mexico: IEEE, 2003, pp.1311-1314.
    PUB | PDF
     
  • [18]
    2003 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714487
    T. Twellmann, et al., “Artificial Neural Networks Machine Learning Approaches for Multivariate Image Analysis”, Proceedings Linking mathematical and biological models in cancer research, Magdeburg: 2003.
    PUB
     
  • [17]
    2003 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714496
    J. Ontrup, et al., “A MeSH Term based Distance Measure for Document Retrieval and Labeling Assistance”, Proc. of EMBC2003, Cancun, Mexico: IEEE EMBS, 2003.
    PUB
     
  • [16]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612741
    T.W. Nattkemper, et al., “Human vs. machine: evaluation of fluorescence micrographs”, Computers in Biology and Medicine, vol. 33, 2003, pp. 31-43.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [15]
    2002 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1613503
    T.W. Nattkemper, et al., “A neural network architecture for automatic segmentation of fluorescence micrographs”, Neurocomputing, NEUROCOMPUTING, vol. 48, ELSEVIER SCIENCE BV, 2002, pp.357-367.
    PUB | DOI | WoS
     
  • [14]
    2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1886441
    W. Schubert, et al., “Automatic recognition of muscle invasive T-lymphocytes expressing dipeptidyl-peptidase IV (CD26) and analysis of the associated cell surface phenotypes”, Journal of Theoretical Medicine, vol. 4, 2002, pp. 67-74.
    PUB | DOI
     
  • [13]
    2001 | Datenpublikation | PUB-ID: 2763993 OA
    T. Hermann and T.W. Nattkemper, Multi-Channel Image Data Analysis using Sonification, Bielefeld University, 2001.
    PUB | Dateien verfügbar | DOI
     
  • [12]
    2001 | Bielefelder E-Dissertation | PUB-ID: 2304068 OA
    T.W. Nattkemper, A neural network-based system for high throughput fluorescence micrograph evaluation, Bielefeld (Germany): Bielefeld University, 2001.
    PUB | Dateien verfügbar
     
  • [11]
    2001 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2375220
    T. Twellmann, et al., “Cell Detection in Micrographs of Tissue Sections Using Support Vector Machines”, Proc. of. ICANN 2001 Workshop on Kernel and Subspace Methods for Computer Vision, 2001.
    PUB
     
  • [10]
    2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1617028
    T.W. Nattkemper, H. Ritter, and W. Schubert, “A neural classifier enabling high-throughput topological analysis of lymphocytes in tissue sections”, IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE, vol. 5, 2001, pp. 138-149.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [9]
    2001 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1886493
    T. Kämpfe, T.W. Nattkemper, and H. Ritter, “Combining Independent Component Analysis and Self-organizing Maps for Cell Image Classification”, Pattern Recognition, B. Radig and S. Florczyk, eds., LNCS, vol. 2191, Berlin: Springer, 2001, pp.262-268.
    PUB
     
  • [8]
    2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2017374 OA
    T. Hermann, et al., “Sonification of Multi-Channel Image Data”, Proc. of the Mathematical and Engineering Techniques in Medical and Biological Sciences, V. Falavar, ed., Las Vegas: CSREA Press, 2000, pp.745-750.
    PUB | PDF
     
  • [7]
    2000 | Datenpublikation | PUB-ID: 2701103 OA
    T. Hermann, T.W. Nattkemper, and H. Ritter, Supplementary Material for "Sonification of Multi-Channel Image Data", Bielefeld University, 2000.
    PUB | Dateien verfügbar | DOI
     
  • [6]
    2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2375211
    T.W. Nattkemper, et al., “A Neural Network Architecture for Automatic Segmentation of Fluorescence Micrographs”, Proc. of the 8th Europ. Symp. on Art. Neur. Netw. (ESANN), M. Verleysen, ed., 2000.
    PUB
     
  • [5]
    2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374799
    T.W. Nattkemper, et al., “Fluorescence Micrograph Segmentation by Gestalt-Based Feature Binding”, Proc. of the Int. Joint Conf. on Neur. Netw. (IJCNN), vol. 1, Como, Italy: 2000, pp.248-254.
    PUB
     
  • [4]
    2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714744
    T.W. Nattkemper, et al., “Automatic Evaluation of Multi-Parameter Fluorescence Micrographs with a Neural Network Architecture”, Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, METMBS '00, vol. 2, Las Vegas, USA: 2000, pp.739-744.
    PUB
     
  • [3]
    1999 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374786
    T.W. Nattkemper, H. Ritter, and W. Schubert, “Extracting Patterns of Lymphocyte Fluorescence from Digital Microscope Images”, Intelligent Data Analysis in Medicine and Pharmacology (IDAMAP 99), Workshop Notes, AMIA 1999, Washington DC: 1999, pp.79-88.
    PUB
     
  • [2]
    1998 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2714985
    G. Heidemann, T.W. Nattkemper, and H. Ritter, “Farbe und Symmetrie für die datengetriebene Generierung prägnanter Fokuspunkte”, 4. Workshop Farbbildverarbeitung, V. Rehrmann, ed., Koblenzer Schriften zur Informatik, vol. 9, Koblenz: Fölbach, 1998, pp.65-71.
    PUB
     
  • [1]
    1996 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2715168
    G. Heidemann, et al., “Blicksteuerung durch präattentive Fokussierungspunkte”, Aktives Sehen in technischen und biologischen Systemen : Beiträge zum Workshop der GI-Fachgruppe 1.0.4 Bildverstehen, 3. und 4. Dezember 1996, Hamburg, B. Mertsching, ed., Proceedings in artificial intelligence, vol. 4, Sankt Augustin: Infix, 1996, pp.109-116.
    PUB
     
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