Tim Wilhelm Nattkemper
tim.nattkemper@uni-bielefeld.dehttps://orcid.org/0000-0002-7986-1158
PEVZ-ID
207 Publikationen
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2984580Rogers, A. D., Appiah-Madson, H., Ardron, J. A., Bax, N. J., Bhadury, P., Brandt, A., Buttigieg, P. - L., et al. (2023). Accelerating ocean species discovery and laying the foundations for the future of marine biodiversity research and monitoring. Frontiers in Marine Science , 10, 1224471. https://doi.org/10.3389/fmars.2023.1224471PUB | DOI | WoS
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2981135van Kevelaer, R., Langenkämper, D., Nilssen, I., Buhl-Mortensen, P., & Nattkemper, T. W. (2023). A data science approach for multi-sensor marine observatory data monitoring cold water corals (Paragorgia arborea) in two campaigns. PLOS ONE, 18(7), e0282723. https://doi.org/10.1371/journal.pone.0282723PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979717Momber, A. W., Langenkämper, D., Möller, T., & Nattkemper, T. W. (2023). The exploration and annotation of large amounts of visual inspection data for protective coating systems on stationary marine steel structures. Ocean Engineering, 278, 114337. https://doi.org/10.1016/j.oceaneng.2023.114337PUB | DOI | WoS
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2969165Kloster, M., Burfeid-Castellanos, A. M., Langenkämper, D., Nattkemper, T. W., & Beszteri, B. (2023). Improving deep learning-based segmentation of diatoms in gigapixel-sized virtual slides by object-based tile positioning and object integrity constraint. PLOS ONE, 18(2), e0272103. https://doi.org/10.1371/journal.pone.0272103PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2968512Momber, A., Langenkämper, D., Möller, T., & Nattkemper, T. W. (2023). Eine Online-Plattform für die Verarbeitung digitaler visueller Daten zur Zustandsbeschreibung von Beschichtungssystemen an maritimen Stahlbauten. Stahlbau . https://doi.org/10.1002/stab.202200080PUB | DOI | WoS
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965093Langenkämper, D., Mogstad, A. A., Hansen, I. M., Baussant, T., Bergsagel, O., Nilssen, I., Frost, T. K., et al. (2022). Exploring time series of hyperspectral images for cold water coral stress response analysis. PLoS ONE , 17(8), e0272408. https://doi.org/10.1371/journal.pone.0272408PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964556Tan, M., Langenkämper, D., & Nattkemper, T. W. (2022). The Impact of Data Augmentations on Deep Learning-Based Marine Object Classification in Benthic Image Transects. Sensors, 22(14), 5383. https://doi.org/10.3390/s22145383PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964311Tzanakis, K., Nattkemper, T. W., Niehaus, K., & Albaum, S. (2022). MetHoS: a platform for large-scale processing, storage and analysis of metabolomics data. BMC Bioinformatics, 23(1), 267. https://doi.org/10.1186/s12859-022-04793-wPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2966492Burfeid-Castellanos, A. M., Kloster, M., Beszteri, S., Postel, U., Spyra, M., Zurowietz, M., Nattkemper, T. W., et al. (2022). A Digital Light Microscopic Method for Diatom Surveys Using Embedded Acid-Cleaned Samples. Water, 14(20), 3332. https://doi.org/10.3390/w14203332PUB | PDF | DOI | Download (ext.) | WoS | Preprint
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964509Schoening, T., Durden, J. M., Faber, C., Felden, J., Heger, K., Hoving, H. - J. T., Kiko, R., et al. (2022). Making marine image data FAIR. Scientific data, 9(1), 414. https://doi.org/10.1038/s41597-022-01491-3PUB | DOI | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964756Schoening, T., Durden, J. M., Faber, C., Felden, J., Heger, K., Hoving, H. - J. T., Kiko, R., et al. (2022). Publisher Correction: Making marine image data FAIR. Scientific Data , 9(1), 445. https://doi.org/10.1038/s41597-022-01567-0PUB | DOI | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2962701Momber, A. W., Nattkemper, T. W., Langenkämper, D., Möller, T., Bruen, D., Schaumann, P., & Shojai, S. (2022). Corrigendum to “A data-based model for condition monitoring and maintenance planning for protective coating systems for wind tower structures” [Renew. Energy 186 (2022) 957–973]. Renewable Energy , 188, 1184. https://doi.org/10.1016/j.renene.2022.02.079PUB | DOI | WoS
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2960547Momber, A. W., Nattkemper, T. W., Langenkämper, D., Möller, T., Brün, D., Schaumann, P., & Shojai, S. (2022). A data-based model for condition monitoring and maintenance planning for protective coating systems for wind tower structures. Renewable Energy. https://doi.org/10.1016/j.renene.2022.01.022PUB | DOI
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959631Zurowietz, M., & Nattkemper, T. W. (2021). Current Trends and Future Directions of Large Scale Image and Video Annotation: Observations From Four Years of BIIGLE 2.0. Frontiers in Marine Science, 8, 760036. https://doi.org/10.3389/fmars.2021.760036PUB | Dateien verfügbar | DOI | Download (ext.) | WoS
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952736Canals, M., Pham, C. K., Bergmann, M., Gutow, L., Hanke, G., van Sebille, E., Angiolillo, M., et al. (2021). The quest for seafloor macrolitter: a critical review of background knowledge, current methods and future prospects. Environmental Research Letters , 16(2), 023001. https://doi.org/10.1088/1748-9326/abc6d4PUB | PDF | DOI | WoS
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2960196Momber, A. W., Möller, T., Langenkämper, D., Nattkemper, T. W., & Bruen, D. (2021). A Digital Twin concept for the prescriptive maintenance of protective coating systems on wind turbine structures. Wind Engineering, 0309524X211060550. https://doi.org/10.1177/0309524X211060550PUB | DOI | WoS
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2949959Muskat, L., Kerkhoff, Y., Humbert, P., Nattkemper, T. W., Eilenberg, J., & Patel, A. V. (2021). Image analysis-based quantification of fungal sporulation by automatic conidia counting and gray value correlation. MethodsX, 101218. https://doi.org/10.1016/j.mex.2021.101218PUB | DOI | WoS | PubMed | Europe PMC
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956291Momber, A., Nattkemper, T. W., Langenkämper, D., Möller, T., Bruen, D., Schaumann, P., & Shojai, S. (2021). Digitalisierung und Verarbeitung von Sensordaten für die Zustandsbewertung von Oberflächenschutzsystemen stählerner Türme von Onshore-Windenergieanlagen. Stahlbau, 90(7), 528-541. https://doi.org/10.1002/stab.202100020PUB | DOI | WoS
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2951226Wüllems, K., Zurowietz, A., Zurowietz, M., Schneider, R., Bednarz, H., Niehaus, K., & Nattkemper, T. W. (2021). Fast Visual Exploration of Mass Spectrometry Images with Interactive Dynamic Spectral Similarity Pseudocoloring. Scientific Reports, 11, 4606. https://doi.org/10.1038/s41598-021-84049-4PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2950877Möller, T., & Nattkemper, T. W. (2021). ALMI - A Generic Active Learning System for Computational Object Classification in Marine Observation Images. Sensors, 21(4), 1134. https://doi.org/10.3390/s21041134PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942079Gemeinholzer, B., Vences, M., Beszteri, B., Bruy, T., Felden, J., Kostadinov, I., Mirailes, A., et al. (2020). Data storage and data re-use in taxonomy-the need for improved storage and accessibility of heterogeneous data. ORGANISMS DIVERSITY & EVOLUTION, 20(1), 1-8. https://doi.org/10.1007/s13127-019-00428-wPUB | PDF | DOI | WoS
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945723Kloster, M., Langenkämper, D., Zurowietz, M., Beszteri, B., & Nattkemper, T. W. (2020). Deep learning-based diatom taxonomy on virtual slides. Scientific Reports, 10(1), 14416. https://doi.org/10.1038/s41598-020-71165-wPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943901Zurowietz, M., & Nattkemper, T. W. (2020). An Interactive Visualization for Feature Localization in Deep Neural Networks. Frontiers in Artificial Intelligence - Machine Learning and Artificial Intelligence , 3, 49. https://doi.org/10.3389/frai.2020.00049PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2943127Miralles, A., Bruy, T., Wolcott, K., Scherz, M. D., Begerow, D., Beszteri, B., Bonkowski, M., et al. (2020). Repositories for Taxonomic Data: Where We Are and What is Missing. Systematic biology. https://doi.org/10.1093/sysbio/syaa026PUB | DOI | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945097Zurowietz, M., & Nattkemper, T. W. (2020). Unsupervised Knowledge Transfer for Object Detection in Marine Environmental Monitoring and Exploration. IEEE Access, 8. doi:10.1109/ACCESS.2020.3014441PUB | PDF | DOI | Download (ext.) | WoS
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948381Langenkämper, D., Zurowietz, M., Schoening, T., & Nattkemper, T. W. (2020). Corrigendum: BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections. Frontiers in Marine Science, 7, 617268. doi:10.3389/fmars.2020.617268PUB | DOI | Download (ext.) | WoS
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944758Langenkämper, D., van Kevelaer, R., Purser, A., & Nattkemper, T. W. (2020). Gear-Induced Concept Drift in Marine Images and Its Effect on Deep Learning Classification. Frontiers in Marine Science, 7, 506. doi:10.3389/fmars.2020.00506PUB | PDF | DOI | WoS
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936089Wüllems, K., Kölling, J., Bednarz, H., Niehaus, K., Hans, V. H., & Nattkemper, T. W. (2019). Detection and visualization of communities in mass spectrometry imaging data. BMC Bioinformatics, 20(1), 303. https://doi.org/10.1186/s12859-019-2890-6PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936069Langenkämper, D., Simon-Lledó, E., Hosking, B., Jones, D. O. B., & Nattkemper, T. W. (2019). On the impact of Citizen Science-derived data quality on deep learning based classification in marine images. PLOS ONE, 14(6), e0218086. https://doi.org/10.1371/journal.pone.0218086PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931637Nattkemper, T. W., & Hattab, G. (2019). SeeVis — 3D space-time cube rendering for visualization of microfluidics image data. Bioinformatics, 35(10), 1802-1804. https://doi.org/10.1093/bioinformatics/bty889PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935488Osterloff, J., Nilssen, I., Jarnegren, J., Van Engeland, T., Buhl-Mortensen, P., & Nattkemper, T. W. (2019). Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory. Scientific reports, 9(1), 6578. doi:10.1038/s41598-019-41275-1PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2935366Zurowietz, M., Langenkämper, D., & Nattkemper, T. W. (2019). BIIGLE2Go - A scalable image annotation system for easy deployment on cruises. Proceedings of IEEE OCEANS 2019. doi:10.1109/OCEANSE.2019.8867417PUB | DOI | Download (ext.)
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2019 | Konferenzbeitrag | Im Druck | PUB-ID: 2937705Möller, T., Langenkämper, D., & Nattkemper, T. W. (In Press). Wind turbine segmentation performing kNN-clustering on superpixel segmentations. In L. Bruzzone & F. Bovolo (Eds.), Image and Signal Processing for Remote Sensing XXV. Proceedings: Vol. 11155. Image and Signal Processing for Remote Sensing XXVPUB
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918218Hattab, G., Wiesmann, V., Becker, A., Munzner, T., & Nattkemper, T. W. (2018). A Novel methodology for characterizing cell subpopulations in automated time-lapse microscopy. Frontiers in Bioengineering and Biotechnology, 6, 17. https://doi.org/10.3389/fbioe.2018.00017PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932066Zurowietz, M., Langenkämper, D., Hosking, B., Ruhl, H., & Nattkemper, T. W. (2018). MAIA - A machine learning assisted image annotation method for environmental monitoring and exploration . PLoS ONE, 13(11), e0207498. doi:10.1371/journal.pone.0207498PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2018 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2921040Möller, T., Nillsen, I., & Nattkemper, T. W. (2018). Tracking Sponge Size and Behaviour with Fixed Underwater Observatories. In Z. Zhang, D. Suter, Y. Tian, A. Branzan Albu, N. Sidère, & H. Jair Escalante (Eds.), Lecture Notes in Computer Science: Vol. 11188. Pattern Recognition and Information Forensics. ICPR 2018 International Workshops, CVAUI, IWCF, and MIPPSNA, Beijing, China, August 20-24, 2018, Revised Selected Papers (pp. 45-54). Cham: Springer. doi:10.1007/978-3-030-05792-3_5PUB | DOI
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2018 | Konferenzbeitrag | Angenommen | PUB-ID: 2921039Langenkämper, D., van Kevelaer, R., & Nattkemper, T. W. (Accepted). Strategies for Tackling the Class Imbalance Problem in Marine Image Classification. Presented at the International Conference on Pattern Recognition 2018, Computer Vision for Automated Analysis of Underwater Imagery Workshop, Beijing.PUB | PDF
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911830Hattab, G., Schlüter, J. - P., Becker, A., & Nattkemper, T. W. (2017). ViCAR: An Adaptive and Landmark-Free Registration of Time Lapse Image Data from Microfluidics Experiments. Frontiers in Genetics, 8, 69. doi:10.3389/fgene.2017.00069PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909190Langenkämper, D., Zurowietz, M., Schoening, T., & Nattkemper, T. W. (2017). BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections. Frontiers in Marine Science, 4(March), 83. doi:10.3389/fmars.2017.00083PUB | Dateien verfügbar | DOI | WoS
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2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2915349Möller, T., Nilssen, I., & Nattkemper, T. W. (2017). Active learning for the classification of species in underwater images from a fixed observatory. Proceedings of The IEEE International Conference on Computer Vision Workships (ICCVW), 2891-2897. Piscataway, NJ: IEEE.PUB
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2017 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2908753Osterloff, J., Möller, T., Nilssen, I., & Nattkemper, T. W. (2017). Extracting Scalar Quantities from Underwater Images - a Toolbox for Image Data from Fixed Observatories.. Presented at the Marine Imaging Workshop 2017, Kiel.PUB | PDF
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901477Ahmed Raza, S. E., Langenkämper, D., Sirinukunwattana, K., Epstein, D., Nattkemper, T. W., & Rajpoot, N. M. (2016). Robust normalization protocols for multiplexed fluorescence bioimage analysis. BioData Mining, 9(1), 11. doi:10.1186/s13040-016-0088-2PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900943Langenkämper, D., Jakobi, T., Feld, D., Jelonek, L., Goesmann, A., & Nattkemper, T. W. (2016). Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations. Frontiers in Genetics, 7, 5. doi:10.3389/fgene.2016.00005PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903712Osterloff, J., Nilssen, I., Eide, I., de Oliveira Figueiredo, M. A., de Souza Tâmega, F. T., & Nattkemper, T. W. (2016). Computational Visual Stress Level Analysis of Calcareous Algae Exposed to Sedimentation. PLOS ONE, 11(6), e0157329. doi:10.1371/journal.pone.0157329PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907705Brink, B., Seidel, A., Kleinbölting, N., Nattkemper, T. W., & Albaum, S. (2016). Omics Fusion - A Platform for Integrative Analysis of Omics Data. Journal of Integrative Bioinformatics, 13(4: SI), 296. doi:10.2390/biecoll-jib-2016-296PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901413Gorzolka, K., Kölling, J., Nattkemper, T. W., & Niehaus, K. (2016). Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging. PLOS ONE, 11(3), e0150208. doi:10.1371/journal.pone.0150208PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2904671Möller, T., Nilssen, I., & Nattkemper, T. W. (2016). Change Detection in Marine Observatory Image Streams using Bi-Domain Feature Clustering. 2016 23rd International Conference on Pattern Recognition (ICPR), 793-798. Piscataway, NJ: IEEE. doi:10.1109/ICPR.2016.7899732PUB | DOI
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2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2906524Möller, T., Nilssen, I., & Nattkemper, T. W. (2016). Data-driven Long Term Change Analysis in Marine Observatory Image Streams. 2016 ICPR 2nd Workshop on Computer Vision for Analysis of Underwater Imagery (CVAUI 2016) . Proceedings, 13-18. Piscataway, NJ: IEEE.PUB
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902750Schoening, T., Osterloff, J., & Nattkemper, T. W. (2016). RecoMIA - Recommendations for marine image annotation: Lessons learned and future directions. Frontiers in Marine Science, 3, 59. doi:10.3389/fmars.2016.00059PUB | PDF | DOI | WoS
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2016 | Konferenzbeitrag | Angenommen | PUB-ID: 2904670Langenkämper, D., & Nattkemper, T. W. (Accepted). COATL - A Learning Architecture for Online Real-Time Detection and Classification Assistance for Environmental Data. Proceedings of the International Conference on Pattern Recognition (ICPR)PUB
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2016 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2903653Durden, J., Schoening, T., Althaus, F., Friedmann, A., Garica, R., Glover, A. G., Greinert, J., et al. (2016). Perspectives in Visual Imaging for Marine Biology and Ecology: From Acquisition to Understanding. In R. N. Hughes, D. J. Hughes, I. P. Smith, & A. C. Dale (Eds.), 54. Oceanography and Marine Biology: An Annual Review (pp. 1-72). Boca Raton: CRC Press.PUB | WoS
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903363Durden, J. M., Bett, B. J., Schoening, T., Morris, K. J., Ruhl, H. A., & Nattkemper, T. W. (2016). Comparison of image annotation data generated by multiple investigators for benthic ecology. Marine Ecology Progress Series, 552, 61-70. doi:10.3354/meps11775PUB | DOI | WoS
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2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2906522Osterloff, J., Nilssen, I., Järnegren, J., Buhl-Mortensen, P., & Nattkemper, T. W. (2016). Polyp activity estimation and monitoring for cold water corals with a deep learning approach. Proceedigs of CVAUI 2016 (ICPR Workshop). doi:10.1109/CVAUI.2016.013PUB | DOI
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2016 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2902749Osterloff, J., Nilssen, I., & Nattkemper, T. W. (2016). A computer vision approach for monitoring the spatial and temporal shrimp distribution at the LoVe observatory. Methods in Oceanography, 15-16, 114-128. doi:10.1016/j.mio.2016.03.002PUB | DOI
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2016 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2902857Schoening, T., Kuhn, T., Jones, D. O. B., Simon-Lledo, E., & Nattkemper, T. W. (Accepted). Fully automated image segmentation for benthic resource assessment of poly-metallic nodules. Methods in Oceanography, 15-16, 78-89. doi:10.1016/j.mio.2016.04.002PUB | DOI
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905905Nuno Gomes-Pereira, J., Auger, V., Beisiegel, K., Benjamin, R., Bergmann, M., Bowden, D., Buhl-Mortensen, P., et al. (2016). Current and future trends in marine image annotation software. Progress in Oceanography, 149, 106-129. doi:10.1016/j.pocean.2016.07.005PUB | DOI | WoS
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722138Kessler, N., Bonte, A., Albaum, S., Mäder, P., Messmer, M., Goesmann, A., Niehaus, K., et al. (2015). Learning to classify organic and conventional wheat - a machine-learning driven approach using the MeltDB 2.0 metabolomics analysis platform. Frontiers in Bioinformatics and Computational Biology, 3, 35. doi:10.3389/fbioe.2015.00035PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2724431Schoening, T., Kuhn, T., Bergmann, M., & Nattkemper, T. W. (2015). DELPHI - fast and adaptive computational laser point detection and visual footprint quantification for arbitrary underwater image collections. Frontiers in Marine Science, 2, 20. doi:10.3389/fmars.2015.00020PUB | PDF | DOI | WoS
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2015 | Datenpublikation | PUB-ID: 2777409Schlueter, J. - P., McIntosh, M., Hattab, G., Nattkemper, T. W., & Becker, A. (2015). Phase Contrast and Fluorescence Bacterial Time-Lapse Microscopy Image Data. Bielefeld University. doi:10.4119/unibi/2777409PUB | Dateien verfügbar | DOI
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2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2775956Steinbrink, B., Schoening, T., Brün, D., & Nattkemper, T. W. (2015). Integrated Digital Marine Image Analysis and Management - new solutions to handle large image collections in environmental monitoring and exploration. Presented at the GEOHAB, Salvador, Brazil.PUB | PDF
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2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2735538Osterloff, J., Nilssen, I., Möller, T., & Nattkemper, T. W. (2015). Computational analysis of spatial species distribution for integrated stationary environmental monitoring. Presented at the Geohab 2015, Salvador, Bahia, Brazil.PUB | PDF
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2015 | Konferenzbeitrag | Im Druck | PUB-ID: 2775947Schoening, T., Langenkämper, D., Steinbrink, B., Brün, D., & Nattkemper, T. W. (In Press). Rapid image processing and classification in underwater exploration using advanced high performance computing. Proc. of the IEEE OceansPUB
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2655889Osterloff, J., Schoening, T., Bergmann, M., & Nattkemper, T. W. (2014). An overview and rating of benthic image pre-processings for color constancy. Presented at the Marine Imaging Workshop, National Oceanography Centre, Southampton, UK.PUB
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705712Langenkämper, D., Goesmann, A., & Nattkemper, T. W. (2014). AKE - The Accelerated k-mer Exploration Web-Tool for Rapid Taxonomic Classification and Visualization. BMC Bioinformatics, 15(1), 384. doi:10.1186/s12859-014-0384-0PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656048Möller, T., Nilssen, I., & Nattkemper, T. W. (2014). Introduction of image-based water transparency descriptors to quantify marine snow and turbidity features. A study with data from a stationary observatory. Presented at the MIW 2014 - Marine Imaging Workshop, Southampton.PUB | PDF
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2706029Kessler, N., Walter, F., Persicke, M., Albaum, S., Kalinowski, J., Goesmann, A., Niehaus, K., et al. (2014). ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and Mass Isotopomer Ratio Analysis. PLoS ONE, 9(11), e113909. doi:10.1371/journal.pone.0113909PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2014 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2683648Osterloff, J., Schoening, T., Bergmann, M., Durden, J. M., Ruhl, H. A., & Nattkemper, T. W. (2014). Ranking Color Correction Algorithms using Cluster Indices. Presented at the ICPR Workshop on Computer Vision for Analysis of Underwater Imagery, Stockhom. doi:10.1109/CVAUI.2014.13PUB | DOI | Download (ext.)
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2690300Kölling, J., Zurowietz, M., & Nattkemper, T. W. (2014). Interactive Exploration of Spatial Distribution in Mass Spectrometry Imaging. Presented at the 4th Symposium on Biological Data Visualization (BioVis), Boston, MA, USAPUB | Download (ext.)
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2676320Osterloff, J., Nilssen, I., de Oliveira Figueiredo, M. A., de Souza Tâmega, F. T., Möller, T., & Nattkemper, T. W. (2014). Automated Image based Biomass Quantification in Mesocosm Studies. Presented at the Geohab 2014, Lorne, Victoria, Australia.PUB | PDF
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2014 | Konferenzbeitrag | Im Druck | PUB-ID: 2690335Rathke, M., Kölling, J., Gorzolka, K., Niehaus, K., & Nattkemper, T. W. (In Press). Interactive and dynamic web-based visual exploration of high dimensional bioimages with real time clustering. Presented at the German Conference on Bioinformatics (GCB), Bielefeld, GermanyPUB
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2014 | Kurzbeitrag Konferenz / Poster | Im Druck | PUB-ID: 2690436Kölling, J., Gorzolka, K., Niehaus, K., & Nattkemper, T. W. (In Press). Spatio-temporal analysis of metabolite profiles during barley germination. Presented at the German Conference on Bioinformatics (GCB), Bielefeld, Germany.PUB | PDF
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2690322Kölling, J., Zurowietz, M., & Nattkemper, T. W. (2014). Interactive Exploration of Spatial Distribution in Mass Spectrometry Imaging. Presented at the 22nd Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA, USA.PUB | Download (ext.)
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2676334Möller, T., Nilssen, I., Sumida, P. Y. G., Elbers, K. L., & Nattkemper, T. W. (2014). Novelty detection in time lapse image data. Presented at the Geohab 2014, Lorne, Victoria, Australia.PUB
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2014 | Konferenzband | Veröffentlicht | PUB-ID: 2901695Giegerich R., Hofestädt R., & Nattkemper T. W. (Eds.) (2014). German Conference on Bioinformatics 2014. GI-Edition: lecture notes in informatics, 235PUB
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2014 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2717407Schoening, T., Kuhn, T., & Nattkemper, T. W. (2014). Seabed Classification Using a Bag-of-Prototypes Feature Representation. Computer Vision for Analysis of Underwater Imagery (CVAUI), 2014 ICPR Workshop on, 17-24. doi:10.1109/CVAUI.2014.9PUB | DOI
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2775961Schoening, T., Brün, D., Kuhn, T., & Nattkemper, T. W. (2014). Image-based marine resource exploration and biodiversity assessment with MAMAS (Marine data Asset Management and Analysis System). Presented at the UMI (Underwater Mining Institute), Lisbon, PortugalPUB
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2610505Purser, A., Ontrup, J., Schoening, T., Thomsen, L., Tong, R., Unnithan, V., & Nattkemper, T. W. (2013). Microhabitat and shrimp abundance within a Norwegian cold-water coral ecosystem. Biogeosciences, 10(9), 5779-5791. doi:10.5194/bg-10-5779-2013PUB | DOI | WoS
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2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2610134Schoening, T., Steinbrink, B., Brün, D., Kuhn, T., & Nattkemper, T. W. (In Press). Ultra-fast segmentation and quantification of poly-metallic nodule coverage in high-resolution digital images. Proceedings of the UMI 2013PUB
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2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2537912Rubiano Castellanos, C. C., Merkle, T., & Nattkemper, T. W. (In Press). Using random forest to find Nuclear Export Signals (NESs) in proteins of Arabidopsis thaliana. Presented at the BIOINFORMATICS Conf., Barcelona, SpainPUB
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2013 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656054Schoening, T., Bergmann, M., & Nattkemper, T. W. (2013). A machine-learning system for the automated detection of megafauna and its applicability unseen footage. Presented at the GEOHAB, RomePUB
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2625914Bergmann, T., Maeder, U., Fiebich, M., Dickob, M., Nattkemper, T. W., & Anselmetti, D. (2013). Categorization of two-photon microscopy images of human cartilage into states of osteoarthritis. Osteoarthritis And Cartilage, 21(8), 1074-1082. doi:10.1016/j.joca.2013.04.019PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2610762Nattkemper, T. W. (2013). Cluster Analysis. In W. Dubitzky, O. Wolkenhauer, K. - H. Cho, & H. Yokota (Eds.), Encyclopedia of Systems Biology New York, NY : Springer.PUB
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2013 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656093Kuhn, T., Rühlemann, C., Wiedicke-Hombach, M., Schoening, T., & Nattkemper, T. W. (2013). Application of Hydro-Acoustic and Video Data for the Exploration of Manganese Nodule Fields. Presented at the ISOPE OMS, Szczecin, PolandPUB
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2610129Kessler, N., Bonte, A., Langenkämper, G., Niehaus, K., Goesmann, A., & Nattkemper, T. W. (2013). MeltDB 2.0 - Advances of the metabolomics software system. Bioinformatics, 29(19), 2452-2459. doi:10.1093/bioinformatics/btt414PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2542584Held, C., Nattkemper, T. W., Palmisano, R., & Wittenberg, T. (2013). Approaches to automatic parameter fitting in a microscopy image segmentation pipeline: An exploratory parameter space analysis. Journal of Pathology Informatics, 4(2), 5. doi:10.4103/2153-3539.109831PUB | DOI | PubMed | Europe PMC
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2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2538625Bonte, A., Kessler, N., Nattkemper, T. W., Goesmann, A., Cecile, T., Mäder, P., Niehaus, K., et al. (In Press). Einsatz von Protein- und Metabolit-Profiling-Methoden zur Unterscheidung von ökologischem und konventionellem Weizen. Presented at the 12. Wissenschaftstagung Ökologischer Landbau „Ideal und Wirklichkeit – Perspektiven Ökologischer Landbewirtschaftung“, Bonn, Germany.PUB
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2494458Schoening, T., Bergmann, M., Purser, A., Dannheim, J., Gutt, J., & Nattkemper, T. W. (2012). Semi-automated image analysis for the assessment of megafaunal densities at the Arctic deep-sea observatory HAUSGARTEN. PLoS ONE, 7(6), e38179. doi:10.1371/journal.pone.0038179PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2455753Raza, S. - E. - A., Epstein, D., Nattkemper, T. W., & Rajpoot, N. (2012). RAMTaB: Robust Alignment of Multi-Tag Bioimages. PLoS ONE, 7(2), e30894. doi:10.1371/journal.pone.0030894PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2012 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656105Figueiredo Creed, M., Coutinho, R., Reynier, M. V., Cesar Paiva, P., Villas, A. B., Bôas, A. B., Tapajó s de Souza Tâmega, F., et al. (2012). Effects of drill cuttings on a deep water rhodolith bed: an integrated approach. Presented at the V International Rhodolith Workshop, Granada, SpainPUB
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2012 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2656050Schoening, T., Kuhn, T., & Nattkemper, T. W. (2012). Estimation of poly-metallic nodule coverage in benthic images. Proc. of the 41st Conference of the Underwater Mining Institute (UMI)PUB
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2012 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656067Schoening, T., Bergmann, M., Purser, A., Gutt, J., Dannheim, J., Taylor, J., Nattkemper, T. W., et al. (2012). The impact of experts’ inter- and intra-observer agreements on computational object classification in images from the deep seafloor of the HAUSGARTEN observatory.. Presented at the 13th International Deep-Sea Biology Symposium, Wellington, New ZealandPUB
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498232Trötschel, C., Albaum, S., Wolff, D., Schröder, S., Goesmann, A., Nattkemper, T. W., & Poetsch, A. (2012). Protein turnover quantification in a multi-labeling approach - from data calculation to evaluation. Molecular & Cellular Proteomics, 11(8), 512-526. doi:10.1074/mcp.M111.014134PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2536156Zhou, L., Pelengaris, S., Abouna, S., Young, J., Epstein, D., Herold, J., Nattkemper, T. W., et al. (2012). Re-Expression of IGF-II Is Important for Beta Cell Regeneration in Adult Mice. PLoS ONE, 7(9), e43623. doi:10.1371/journal.pone.0043623PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2481783Kölling, J., Langenkämper, D., Sylvie, A., Michale, K., & Nattkemper, T. W. (2012). WHIDE - A web tool for visual data mining colocation patterns in multivariate bioimages. Bioinformatics, 28(8), 1143-1150. doi:10.1093/bioinformatics/bts104PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2012 | Konferenzbeitrag | PUB-ID: 2515700Schoening, T., Bergmann, M., Boetius, A., & Nattkemper, T. W. (2012). Investigation of hidden parameters influencing the automated object detection in benthic images. Presented at the IEEE OCEANS 2012 MTS/IEEE, Hampton Roads, Virginia, USA.PUB
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2012 | Konferenzbeitrag | PUB-ID: 2515671Held, C., Nattkemper, T. W., & Wittenberg, T. (2012). Approaches to automatic parameter fitting in a microscopy image segmentation pipeline: An exploratory parameter space analysis. Presented at the Histopathology Image Analysis (HIMA) workshop at MICCAI 2012, NizzaPUB
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300114Loyek, C., Bunkowski, A., Vautz, W., & Nattkemper, T. W. (2011). Web2.0 paves new ways for collaborative and exploratory analysis of Chemical Compounds in Spectrometry Data. Journal of Integrative Bioinformatics, 8(2), 158. https://doi.org/10.2390/biecoll-jib-2011-158PUB | DOI | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300063Albaum, S., Hahne, H., Otto, A., Haußmann, U., Becher, D., Poetsch, A., Goesmann, A., et al. (2011). A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study. Proteome Science, 9(1), 30. https://doi.org/10.1186/1477-5956-9-30PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300073Martin, C., Tauchen, A., Becker, A., & Nattkemper, T. W. (2011). A Normalized Tree Index for identification of correlated clinical parameters in microarray data. BioData Mining, 4(1), 2. https://doi.org/10.1186/1756-0381-4-2PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300082Loyek, C., Khan, M., Rajpoot, N., & Nattkemper, T. W. (2011). BIOIMAX - A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data. BMC Bioinformatics, 12(1), 297. https://doi.org/10.1186/1471-2105-12-297PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300092Bergmann, M., Langwald, N., Ontrup, J., Soltwedel, T., Schewe, I., Klages, M., & Nattkemper, T. W. (2011). Megafaunal assemblages from two shelf stations west of Svalbard. Marine Biology Research, 7(6), 525-539. https://doi.org/10.1080/17451000.2010.535834PUB | DOI | WoS
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300232Loyek, C., Kölling, J., Langenkämper, D., Niehaus, K., & Nattkemper, T. W. (2011). A Web2.0 Strategy for the Collaborative Analysis of Complex Bioimages. In J. Gama, E. Bradley, & J. Hollmén (Eds.), Lecture Notes in Computer Science: Vol. 7014. Advances in Intelligent Data Analysis X: 10th International Symposium, IDA 2011, Porto, Portugal, October 29-31, 2011. Proceedings (pp. 258-269). Berlin, Heidelberg: Springer. https://doi.org/10.1007/978-3-642-24800-9_25PUB | PDF | DOI
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300237Langenkämper, D., Kölling, J., Khan, M., Rajpoot, N., & Nattkemper, T. W. (2011). Towards Protein Network Analysis using TIS Imaging and Exploratory Data Analysis. Presented at the Workshop on Computational Systems Biology (WCSB), Zürich, Switzerland.PUB | PDF
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2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656082Purser, A., Ontrup, J., Schoening, T., Thomsen, L., Unnithan, V., & Nattkemper, T. W. (2011). How to squeeze even more from your Terabytes of video data!. Presented at thePUB
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2011 | Konferenzbeitrag | Im Druck | PUB-ID: 2315356Bergmann, T., Fiebich, T. M., Nattkemper, T. W., & Anselmetti, D. (In Press). Categorization of 2-photon microscopy images of human articular cartilage into states of arthritis. Presented at the Tagung der Biomedizinischen Technik (BMT), Freiburg, Germany.PUB
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2373808Herold, J., Loyek, C., & Nattkemper, T. W. (2011). Multivariate Image Mining. Wiley Interdisciplinary Reviews: DATA MINING AND KNOWLEDGE DISCOVERY, 1(1), 2-13. https://doi.org/10.1002/widm.4PUB | DOI | WoS
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300102Arif, M., Rajpoot, N., Technow, U., Chakraborty, T., Fisch, N., Jensen, N. A., Niehaus, K., et al. (2011). Quantification of Cell Infection Caused by Listeria monocytogenes Invasion. Journal of Biotechnology, 154(1), 76-83. https://doi.org/10.1016/j.jbiotec.2011.03.008PUB | DOI | PubMed | Europe PMC
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2323705Langenkämper, D., Kölling, J., Abouna, S., Khan, M., Niehaus, K., & Nattkemper, T. W. (2011). TICAL - a web-tool for multivariate image clustering and data topology preserving visualization. Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany.PUB | PDF | Download (ext.)
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093532Scherbart, A., & Nattkemper, T. W. (2011). Looking inside self-organizing map ensembles with resampling and negative correlation learning. Neural Networks, 24(1), 130-141. https://doi.org/10.1016/j.neunet.2010.08.004PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300235Schoening, T., Hans, V., & Nattkemper, T. W. (2011). Towards improved epilepsia diagnosis by unsupervised segmentation of neuropathology tissue sections using Ripley’s-L features. Bildverarbeitung für die Medizin 2011:Algorithmen - Systeme - Anwendungen Proceedings des Workshops vom 20. - 22. März 2011 in Lübeck, Informatik aktuell, 44-48. Berlin, Heidelberg: Springer. https://doi.org/10.1007/978-3-642-19335-4_11PUB | DOI
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929340Burgemeister, S., Nattkemper, T. W., Noll, T., Hoffrogge, R., & Flaschel, E. (2010). CellViCAM-Cell viability classification for animal cell cultures using dark field micrographs. JOURNAL OF BIOTECHNOLOGY, 149(4), 310-316. https://doi.org/10.1016/j.jbiotec.2010.07.020PUB | DOI | WoS | PubMed | Europe PMC
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1794419Herold, J., Zhou, L., Abouna, S., Pelengaris, S., Epstein, D., Khan, M., & Nattkemper, T. W. (2010). Integrating semantic annotation and information visualization for the analysis of multichannel fluorescence micrographs from pancreatic tissue. Computerized Medical Imaging and Graphics, 34(6), 446-452. https://doi.org/10.1016/j.compmedimag.2009.10.004PUB | DOI | WoS | PubMed | Europe PMC
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929311Gölzhäuser, A., Nattkemper, T. W., Niehaus, K., Pühler, A., & Sauer, M. (2010). BioImaging: Contributions from biology, physics and informatics. Journal of Biotechnology, 149(4), 227-228. https://doi.org/10.1016/j.jbiotec.2010.08.015PUB | DOI | WoS | PubMed | Europe PMC
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929335Herold, J., Schubert, W., & Nattkemper, T. W. (2010). Automated detection and quantification of fluorescently labeled synapses in murine brain tissue sections for high throughput applications. JOURNAL OF BIOTECHNOLOGY, 149(4), 299-309. https://doi.org/10.1016/j.jbiotec.2010.03.004PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018390Herold, J., Abouna, S., Zhou, L., Pelengaris, S., Epstein, D. B. A., Khan, M., & Nattkemper, T. W. (2009). A way towards analyzing high-content bioimage data by means of semantic annotation and visual data mining. SPIE Medical Imaging SPIE. https://doi.org/10.1117/12.811710PUB | DOI
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018422Ontrup, J., Ehnert, N., Bergmann, M., & Nattkemper, T. W. (2009). BIIGLE - Web 2.0 enabled labelling and exploring of images from the Arctic deep-sea observatory HAUSGARTEN. OCEANS 2009 - Europe Bremen. https://doi.org/10.1109/oceanse.2009.5278332PUB | DOI
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018427Qureshi, H., Rajpoot, N., Nattkemper, T. W., & Hans, V. (2009). A Robust Adaptive Wavelet-based Method for Classification of Meningioma Histology Images. MICCAI«2009 Workshop on Optical Tissue Image Analysis in Microscopy, Histology, and EndoscopyPUB
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635314Diaz, N. N., Krause, L., Goesmann, A., Niehaus, K., & Nattkemper, T. W. (2009). TACOA - Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach. BMC Bioinformatics, 10(1), 56. https://doi.org/10.1186/1471-2105-10-56PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589531Albaum, S., Neuweger, H., Fraenzel, B., Lange, S., Mertens, D., Troetschel, C., Wolters, D., et al. (2009). Qupe-a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments. Bioinformatics, 25(23), 3128-3134. https://doi.org/10.1093/bioinformatics/btp568PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588783Purser, A., Bergmann, M., Ontrup, J., & Nattkemper, T. W. (2009). Use of machine-learning algorithms for the automated detection of cold-water coral habitats: a pilot study. Marine Ecology Progress Series, 397, 241-251. https://doi.org/10.3354/meps08154PUB | DOI | WoS
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1591448Saalbach, A., Lange, O., Nattkemper, T. W., & Meyer-Baese, A. (2009). On the application of (topographic) independent and tree-dependent component analysis for the examination of DCE-MRI data. Biomedical Signal Processing and Control, BIOMEDICAL SIGNAL PROCESSING AND CONTROL, 4, 247-253. ELSEVIER SCI LTD. https://doi.org/10.1016/j.bspc.2009.03.010PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018440Schoening, T., Ehnert, N., Ontrup, J., & Nattkemper, T. W. (2009). BIIGLE Tools - A Web 2.0 Approach for Visual Bioimage Database Mining. IV 09 - Intl. Conference on Information Visualization IEEE. https://doi.org/10.1109/iv.2009.71PUB | DOI
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018405Loyek, C., Woermann, F. G., & Nattkemper, T. W. (2008). Detection of Focal Cortical Dysplasia in MRI Using Textural Features. In T. Tolxdorff (Ed.), Informatik aktuell. Proceedings of BVM 2008 (pp. 432-436). Berlin, Heidelberg: Springer Verlag. https://doi.org/10.1007/978-3-540-78640-5_87PUB | DOI
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636280Timm, W., Scherbart, A., Boecker, S., Kohlbacher, O., & Nattkemper, T. W. (2008). Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics. BMC Bioinformatics, 9(1), 443. https://doi.org/10.1186/1471-2105-9-443PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585611Wei, N., Flaschel, E., Friehs, K., & Nattkemper, T. W. (2008). A machine vision system for automated non-invasive assessment of cell viability via dark field microscopy, wavelet feature selection and classification. BMC Bioinformatics, 9(1), 449. https://doi.org/10.1186/1471-2105-9-449PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587052Martin, C., Diaz, N. N., Ontrup, J., & Nattkemper, T. W. (2008). Hyperbolic SOM-based clustering of DNA fragment features for taxonomic visualization and classification. Bioinformatics, 24(14), 1568-1574. https://doi.org/10.1093/bioinformatics/btn257PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588286Twellmann, T., Meyer-Baese, A., Lange, O., Foo, S., & Nattkemper, T. W. (2008). Model-free visualization of suspicious lesions in breast MRI based on supervised and unsupervised learning. ENGINEERING APPLICATIONS OF ARTIFICIAL INTELLIGENCE, 21(2), 129-140. https://doi.org/10.1016/j.engappai.2007.04.005PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783364Krause, L., Diaz, N. N., Goesmann, A., Kelley, S., Nattkemper, T. W., Rohwer, F., Edwards, R. A., et al. (2008). Phylogenetic classification of short environmental DNA fragments. Nucleic Acids Research, 36(7), 2230-2239. https://doi.org/10.1093/nar/gkn038PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018409Martin, C., & Nattkemper, T. W. (2008). A Tree Index to Support Clustering Based Exploratory Data Analysis. Bioinformatics Research and Development : Second International Conference, BIRD 2008 Vienna, Austria, July 7-9, 2008 Proceedings, Communications in Computer and Information Science, 13, 1-15. Berlin, Heidelberg: Springer. https://doi.org/10.1007/978-3-540-70600-7_1PUB | DOI
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018435Scherbart, A., Timm, W., Böcker, S., & Nattkemper, T. W. (2008). Improved Mass Spectrometry Peak Intensity Prediction by Adaptive Feature Weighting. International Conference on Neural Information Processing Auckland, New Zealand. https://doi.org/10.1007/978-3-642-02490-0_63PUB | DOI
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018381Albaum, S., Neuweger, H., Lange, S., Mertens, D., Runte, K., Kalinowski, J., Nattkemper, T. W., et al. (2008). ProSE - "Software as a Service" for Quantitative Proteomics (Poster abstract). HUPO 7th Annual World CongressPUB
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018398Herold, J., Friedenberger, M., Bode, M., Rajpoot, N., Schubert, W., & Nattkemper, T. W. (2008). Flexible Synapse Detection in Fluorescence Micrographs by Modeling Human Expert Grading. Proc. of 2008 IEEE International Symposium on Biomedical Imaging. https://doi.org/10.1109/isbi.2008.4541254PUB | DOI
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018432Scherbart, A., & Nattkemper, T. W. (2008). The Diversity of Regression Ensembles Combining Bagging and Random Subspace Method. International Conference on Neural Information Processing. https://doi.org/10.1007/978-3-642-03040-6_111PUB | DOI
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630738Pobigaylo, N., Szymczak, S., Nattkemper, T. W., & Becker, A. (2008). Identification of genes relevant to symbiosis and competitiveness in Sinorhizobium meliloti using signature-tagged mutants. MOLECULAR PLANT-MICROBE INTERACTIONS, 21(2), 219-231. https://doi.org/10.1094/MPMI-21-2-0219PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018412Martin, C., Díaz Solórzano, N. N., Ontrup, J., & Nattkemper, T. W. (2007). Genome feature exploration using hyperbolic Self-Organizing Maps. Proceedings of the 6th International Workshop on Self-Organizing Maps (WSOM 2007) Bielefeld: Bielefeld University. https://doi.org/10.2390/biecoll-wsom2007-140PUB | PDF | DOI
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2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714045Scherbart, A., Timm, W., Böcker, S., & Nattkemper, T. W. (2007). SOM-based Peptide Prototyping for Mass Spectrometry Peak Intensity Prediction. Proceedings of the 6th Workshop on Self-Organizing Maps (WSOM 07) Bielefeld: Bielefeld University. https://doi.org/10.2390/biecoll-wsom2007-157PUB | PDF | DOI
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2007 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2714002Lessmann, B., Wang, Y., Bergmann, M., Kämpfe, T., & Nattkemper, T. W. (2007). Use of automated image analysis to detect changes in megafaunal densities at HAUSGARTEN (79°N west off Svalbard) between 2002 and 2004. Presented at the EMBS - 42nd European Marine Biology Symposium, Kiel, Germany.PUB
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2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2714021Nattkemper, T. W., Degenhard, A., & Twellmann, T. (2007). Breast Tumor Classification and Visualization with Machine-Learning Approaches. In M. A. Hayat (Ed.), Cancer Imaging - Lung and breast carcinomas (Vol. 1, pp. 309-321). Amsterdam : Academic Press.PUB
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2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2714040Scherbart, A., Timm, W., Boecker, S., & Nattkemper, T. W. (2007). Neural Network Approach for Mass Spectrometry Prediction by Peptide Prototyping. In J. M. Sá de (Ed.), Lecture Notes in Computer Science: Vol. 4669. Artificial Neural Networks – ICANN 2007 - 17th International Conference, Porto, Portugal, September 9-13, 2007, Proceedings, Part II (pp. 90-99). Berlin: Springer. doi:10.1007/978-3-540-74695-9_10PUB | DOI
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714032Lessmann, B., Nattkemper, T. W., Kessar, P., Pointon, L., Khazen, M., Leach, M. O., & Degenhard, A. (2007). Multiscale Analysis of MR Mammography Data. Zeitschrift für Medizinische Physik (german journal of medical physics), 17(3), 166-171. doi:10.1016/j.zemedi.2006.11.009PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595739Wei, N., You, J., Friehs, K., Flaschel, E., & Nattkemper, T. W. (2007). In situ dark field microscopy for on-line monitoring of yeast cultures. BIOTECHNOLOGY LETTERS, 29(3), 373-378. https://doi.org/10.1007/s10529-006-9245-xPUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593120Wei, N., You, J., Friehs, K., Flaschel, E., & Nattkemper, T. W. (2007). An in situ probe for on-line monitoring of cell density and viability on the basis of dark field microscopy in conjunction with image processing and supervised machine learning. Biotechnology and Bioengineering, 97(6), 1489-1500. https://doi.org/10.1002/bit.21368PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630749Lessmann, B., Nattkemper, T. W., Hans, V. H., & Degenhard, A. (2007). A method for linking computed image features to histological semantics in neuropathology. Journal of Biomedical Informatics, 40(6), 631-641. https://doi.org/10.1016/j.jbi.2007.06.007PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783345Krause, L., McHardy, A. C., Nattkemper, T. W., Pühler, A., Stoye, J., & Meyer, F. (2007). GISMO - gene identification using a support vector machine for ORF classification. Nucleic Acids Research, 35(2), 540-549. https://doi.org/10.1093/nar/gkl1083PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2018416Nattkemper, T. W., Degenhard, A., & Twellmann, T. (2007). Breas. In M. A. Hayat (Ed.), Cancer Imaging - Lung and breast carcinomas (Vol. 1, pp. 309-324). Academic Press.PUB
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714075Deters grosse, H., Timm, W., & Nattkemper, T. W. (2006). REEFSOM - A Metaphoric Data Display for Exploratory Data Mining : journal of new media in neural and cognitive science and education. Brains, Minds and Media, 2(bmm305)PUB | Download (ext.)
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374232Varini, C., Lessmann, B., Degenhard, A., Hans, V. H., & Nattkemper, T. W. (2006). Visual Exploration of Pathology Images by a Discrete Wavelet Transform Preprocessed Locally Linear Embedding. In H. Handels, J. Ehrhardt, A. Horsch, H. - P. Meinzer, T. Tolxdorff, & Gesellschaft für Informatik (Eds.), Informatik aktuell. Bildverarbeitung für die Medizin (pp. 66-70). Berlin : Springer.PUB | Download (ext.)
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714148Twellmann, T., Lange, O., Nattkemper, T. W., & Meyer, A. (2006). Visualizations of Suspicious Lesions in Breast MRI Based on Intelligent Neural Systems. Intelligent Computing: Theory and Applications IV, 6229. doi:10.1117/12.668674PUB | DOI
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374254Lessmann, B., Nattkemper, T. W., Huth, J., Loyek, C., Kessar, P., Khazen, M., Pointon, L., et al. (2006). Content Based Image Retrieval for Dynamic Time Series Data. Proceedings of BVM, 61-65PUB
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374494Timm, W., Böcker, S., Twellmann, T., & Nattkemper, T. W. (2006). Peak intensity prediction for pmf mass spectra using support vector regression. Proc. of the 7th International FLINS Conference on Applied Artificial Intelligence, 565-572. WORLD SCIENTIFIC. https://doi.org/10.1142/9789812774118_0080PUB | DOI
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600329Miksch, G., Bettenworth, F., Friehs, K., Flaschel, E., Saalbach, A., & Nattkemper, T. W. (2006). A rapid reporter system using GFP as a reporter protein for identification and screening of synthetic stationary-phase promoters in Escherichia coli. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 70(2), 229-236. https://doi.org/10.1007/s00253-005-0060-4PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1597259Martin, C., Deters, H. grosse, & Nattkemper, T. W. (2006). Fusing biomedical multi-modal data for exploratory data analysis. In S. Kollias (Ed.), ARTIFICIAL NEURAL NETWORKS - ICANN 2006, PT 2 (Vol. 4132, pp. 798-807). Berlin, Heidelberg: SPRINGER-VERLAG BERLIN. https://doi.org/10.1007/11840930_83PUB | DOI | WoS
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598838Pobigaylo, N., Wetter, D., Szymczak, S., Schiller, U., Kurtz, S., Meyer, F., Nattkemper, T. W., et al. (2006). Construction of a large signature-tagged mini-Tn5 transposon library and its application to mutagenesis of Sinorhizobium meliloti. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 72(6), 4329-4337. https://doi.org/10.1128/AEM.03072-05PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596731Varini, C., Degenhard, A., & Nattkemper, T. W. (2006). Visual exploratory analysis of DCE-MRI data in breast cancer by dimensional data reduction: A comparative study. BIOMEDICAL SIGNAL PROCESSING AND CONTROL, 1(1), 56-63. https://doi.org/10.1016/j.bspc.2006.05.001PUB | DOI | WoS
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598535Varini, C., Degenhard, A., & Nattkemper, T. W. (2006). ISOLLE: LLE with geodesic distance. NEUROCOMPUTING, 69(13-15), 1768-1771. https://doi.org/10.1016/j.neucom.2005.12.120PUB | DOI | WoS
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603560Nattkemper, T. W., Arnrich, B., Lichte, O., Timm, W., Degenhard, A., Pointon, L., Hayes, C., et al. (2005). Evaluation of radiological features for breast tumour classification in clinical screening with machine learning methods. ARTIFICIAL INTELLIGENCE IN MEDICINE, 34(2), 129-139. https://doi.org/10.1016/j.artmed.2004.09.001PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714153Lessmann, B., Nattkemper, T. W., Degenhard, A., Pointon, L., Kessar, P., Khazen, M., & Leach, M. O. (2005). Clustering approach for wavelet transformed MR image data. Proceedings of the 14th International Conference of Medical Physics, 1412.PUB
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714331Saalbach, A., Twellmann, T., & Nattkemper, T. W. (2005). Spectral Clustering for Data Categorization based on Self-Organizing Maps. In N. Nasser M. (Ed.), Applications of Neural Networks and Machine Learning in Image Processing IX (Vol. 5673, pp. 12-18). San Jose, CA.PUB
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2005 | Monographie | PUB-ID: 2714309Bettenworth, F., Miksch, G., Fries, K., Flaschel, E., Saalbach, A., Eickmeyer, J., & Nattkemper, T. W. (2005). An Online Monitoring System for the Screening of Stationary-Phase Promoters in E. Coli using GFP as a Reporter Protein.PUB
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374666Twellmann, T., Lichte, O., Saalbach, A., Wismüller, A., & Nattkemper, T. W. (2005). An Adaptive Colour Scale for Comparison of Pseudo Colouring Techniques for DCE-MRI Data. Presented at the Workshop für Bildverarbeiteung für die MedzinPUB
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374546Saalbach, A., Twellmann, T., Nattkemper, T. W., Wismüller, A., Ontrup, J., & Ritter, H. (2005). A hyperbolic topographic mapping for proximity data. Proc. of the IASTED International Conference of Artificial Intelligence and Applications, 2005, 106-111.PUB
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714263Twellmann, T., Lichte, O., & Nattkemper, T. W. (2005). An Adaptive Tissue Characterisation Network for Model-Free Visualisation of Dynamic Contrast-Enhanced Magnetic Resonance Image Data. IEEE Transactions on Medical Imaging, 24(10), 1256-1266. doi:10.1109/TMI.2005.854517PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714340Nattkemper, T. W., & Wismüller, A. (2005). Tumour feature analysis with unsupervised machine learning. Medical Image Analysis, 9(4), 344-351. doi:10.1016/j.media.2005.01.004PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2374187Saalbach, A., Ontrup, J., Ritter, H., & Nattkemper, T. W. (2005). Image fusion based on topographic mappings using the hyperbolic space. Information Visualization, 4(4), 266-275. https://doi.org/10.1057/palgrave.ivs.9500106PUB | DOI
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603030Nattkemper, T. W., & Wismuller, A. (2005). Tumor feature visualization with unsupervised learning. MEDICAL IMAGE ANALYSIS, 9(4), 344-351. https://doi.org/10.1016/j.media.2005.01.004PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946602Wei, N., Flaschel, E., Saalbach, A., Twellmann, T., & Nattkemper, T. W. (2005). Reagent-free automatic cell viability determination using neural networks based machine vision and dark-field microscopy in Saccharomyces cerevisiae. Conf Proc IEEE Eng Med Biol Soc, 6, 6305-6308. https://doi.org/10.1109/iembs.2005.1615939PUB | DOI | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602344Prank, K., Schulze, E., Eckert, O., Nattkemper, T. W., Bettendorf, M., Maser-Gluth, C., Sejnowski, T. J., et al. (2005). Machine learning approaches for phenotype-genotype mapping: predicting heterozygous mutations in the CYP21B gene from steroid profiles. EUROPEAN JOURNAL OF ENDOCRINOLOGY, 153(2), 301-305. https://doi.org/10.1530/eje.1.01957PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601519Varini, C., Degenhard, A., & Nattkemper, T. W. (2005). ISOLLE: Locally linear embedding with geodesic distance. In A. Jorge (Ed.), Lecture notes in computer science ; 3721 : Lecture notes in artificial intelligence: Vol. 3721. KNOWLEDGE DISCOVERY IN DATABASES: PKDD 2005 (pp. 331-342). Berlin, Heidelberg: SPRINGER-VERLAG BERLIN. https://doi.org/10.1007/11564126_34PUB | DOI | WoS
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601848Miksch, G., Bettenworth, F., Friehs, K., Flaschel, E., Saalbach, A., Twellmann, T., & Nattkemper, T. W. (2005). Libraries of synthetic stationary-phase and stress promoters as a tool for fine-tuning of expression of recombinant proteins in Escherichia coli. Journal of Biotechnology, JOURNAL OF BIOTECHNOLOGY, 120, 25-37. ELSEVIER SCIENCE BV. https://doi.org/10.1016/j.jbiotec.2005.04.027PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601906Lessmann, B., Degenhard, A., Kessar, P., Pointon, L., Khazen, M., Leach, M. O., & Nattkemper, T. W. (2005). SOM-based wavelet filtering for the exploration of medical images. In W. Duch (Ed.), Lecture notes in computer science: Vol. 3696. ARTIFICIAL NEURAL NETWORKS: BIOLOGICAL INSPIRATIONS - ICANN 2005, PT 1, PROCEEDINGS (pp. 671-676). Berlin, Heidelberg: SPRINGER-VERLAG BERLIN. https://doi.org/10.1007/11550822_104PUB | DOI | WoS
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602177Twellmann, T., Lichte, O., & Nattkemper, T. W. (2005). An adaptive tissue characterization network for model-free visualization of dynamic contrast-enhanced magnetic resonance image data. IEEE TRANSACTIONS ON MEDICAL IMAGING, 24(10), 1256-1266. https://doi.org/10.1109/TMI.2005.854517PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1666510Twellmann, T., Saalbach, A., Gerstung, O., Leach, M. O., & Nattkemper, T. W. (2004). Image fusion for dynamic contrast enhanced magnetic resonance imaging. Biomed Eng Online, 3(1), 35. https://doi.org/10.1186/1475-925X-3-35PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946892Nattkemper, T. W. (2004). Automatic segmentation of digital micrographs: a survey. Stud Health Technol Inform, 107(Pt 2), 847-851.PUB | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946838Twellmann, T., Saalbach, A., Müller, C., Nattkemper, T. W., & Wismuller, A. (2004). Detection of suspicious lesions in dynamic contrast enhanced MRI data. The 26th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 1, 454-457.PUB | PubMed | Europe PMC
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2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714397Kämpfe, T., Nattkemper, T. W., & Ritter, H. (2004). AQUISAR: Image Retrieval in Underwater Webcam Images. WIAMIS 2004 : 5th International Workshop on Image Analysis for Multimedia Interactive ServicesPUB
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2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714346Lessmann, B., Twellmann, T., Degenhard, A., Nattkemper, T. W., & Leach, M. O. (2004). Wavelet features for improved tumour detection in DCE-MRI. In D. Rueckert, J. Hajnal, & G. - Z. Yang (Eds.), Proceedings of Medical Image Understanding and Analysis (MIUA) (pp. 93-96). London, UK: BMVA.PUB
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714465Nattkemper, T. W. (2004). Multivariate image analysis in biomedicine: a methodological review. Journal of Biomedical Informatics, 37(5), 380-391.PUB
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2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714382Saalbach, A., Twellmann, T., Nattkemper, T. W., White, M. J., Khazen, M., & Leach, M. O. (2004). Visualization of Multivariate Image Data using Image Fusion and Perceptually Optimized Color Scales based on sRGB. In J. Robert L. Galloway (Ed.), Proceedings of SPIE: Vol. 5367. Medical Imaging 2004: Visualization, Image-Guided Procedures, and Display San Diego, CA: SPIE. doi:10.1117/12.534419PUB | DOI
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2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2375262Varini, C., Nattkemper, T. W., Degenhard, A., & Wismüller, A. (2004). Visualisation of Breast Tumour DCE-MRI Data using LLE. Proc. Medical Image Understanding and Analysis (MIUA), 97-100. BMVA.PUB
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606041Nattkemper, T. W. (2004). Multivariate image analysis in biomedicine. JOURNAL OF BIOMEDICAL INFORMATICS, 37(5), 380-391. https://doi.org/10.1016/j.jbi.2004.07.010PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2017545Nattkemper, T. W., Hermann, T., Schubert, W., & Ritter, H. (2003). Look & Listen: Sonification and Visualization of Multiparameter Micrographs. Engineering in Medicine and Biology Society. Proceedings of the 25th Annual International Conference of the IEEE, 2, 1311-1314. Cancun, Mexico: IEEE.PUB | PDF
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2003 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714487Twellmann, T., Saalbach, A., Nattkemper, T. W., & Ritter, H. (2003). Artificial Neural Networks Machine Learning Approaches for Multivariate Image Analysis. Proceedings Linking mathematical and biological models in cancer research Magdeburg.PUB
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2003 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714496Ontrup, J., Nattkemper, T. W., Gerstung, O., & Ritter, H. (2003). A MeSH Term based Distance Measure for Document Retrieval and Labeling Assistance. Proc. of EMBC2003PUB
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612741Nattkemper, T. W., Twellmann, T., Ritter, H., & Schubert, W. (2003). Human vs. machine: evaluation of fluorescence micrographs. Computers in Biology and Medicine, 33(1), 31-43. https://doi.org/10.1016/S0010-4825(02)00060-4PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2002 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1613503Nattkemper, T. W., Wersing, H., Schubert, W., & Ritter, H. (2002). A neural network architecture for automatic segmentation of fluorescence micrographs. Neurocomputing, NEUROCOMPUTING, 48, 357-367. ELSEVIER SCIENCE BV. https://doi.org/10.1016/S0925-2312(01)00642-7PUB | DOI | WoS
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1886441Schubert, W., Friedenberger, M., Haars, R., Bode, M., Philipsen, L., Nattkemper, T. W., & Ritter, H. (2002). Automatic recognition of muscle invasive T-lymphocytes expressing dipeptidyl-peptidase IV (CD26) and analysis of the associated cell surface phenotypes. Journal of Theoretical Medicine, 4(1), 67-74. https://doi.org/10.1080/10273660290015189PUB | DOI
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2001 | Datenpublikation | PUB-ID: 2763993Hermann, T., & Nattkemper, T. W. (2001). Multi-Channel Image Data Analysis using Sonification. Bielefeld University. doi:10.4119/unibi/2763993PUB | Dateien verfügbar | DOI
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2001 | Bielefelder E-Dissertation | PUB-ID: 2304068Nattkemper, T. W. (2001). A neural network-based system for high throughput fluorescence micrograph evaluation. Bielefeld (Germany): Bielefeld University.PUB | Dateien verfügbar
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2001 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2375220Twellmann, T., Nattkemper, T. W., Schubert, W., & Ritter, H. (2001). Cell Detection in Micrographs of Tissue Sections Using Support Vector Machines. Proc. of. ICANN 2001 Workshop on Kernel and Subspace Methods for Computer VisionPUB
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1617028Nattkemper, T. W., Ritter, H., & Schubert, W. (2001). A neural classifier enabling high-throughput topological analysis of lymphocytes in tissue sections. IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE, 5(2), 138-149. https://doi.org/10.1109/4233.924804PUB | DOI | WoS | PubMed | Europe PMC
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2001 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1886493Kämpfe, T., Nattkemper, T. W., & Ritter, H. (2001). Combining Independent Component Analysis and Self-organizing Maps for Cell Image Classification. In B. Radig & S. Florczyk (Eds.), LNCS: Vol. 2191. Pattern Recognition (pp. 262-268). Berlin: Springer.PUB
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2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2017374Hermann, T., Nattkemper, T. W., Schubert, W., & Ritter, H. (2000). Sonification of Multi-Channel Image Data. In V. Falavar (Ed.), Proc. of the Mathematical and Engineering Techniques in Medical and Biological Sciences (pp. 745-750). Las Vegas: CSREA Press.PUB | PDF
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2000 | Datenpublikation | PUB-ID: 2701103Hermann, T., Nattkemper, T. W., & Ritter, H. (2000). Supplementary Material for "Sonification of Multi-Channel Image Data". Bielefeld University. doi:10.4119/unibi/2701103PUB | Dateien verfügbar | DOI
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2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2375211Nattkemper, T. W., Wersing, H., Schubert, W., & Ritter, H. (2000). A Neural Network Architecture for Automatic Segmentation of Fluorescence Micrographs. In M. Verleysen (Ed.), Proc. of the 8th Europ. Symp. on Art. Neur. Netw. (ESANN)PUB
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2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374799Nattkemper, T. W., Wersing, H., Schubert, W., & Ritter, H. (2000). Fluorescence Micrograph Segmentation by Gestalt-Based Feature Binding. Proc. of the Int. Joint Conf. on Neur. Netw. (IJCNN), 1, 248-254PUB
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2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714744Nattkemper, T. W., Wersing, H., Schubert, W., & Ritter, H. (2000). Automatic Evaluation of Multi-Parameter Fluorescence Micrographs with a Neural Network Architecture. Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, METMBS '00, 2, 739-744PUB
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1999 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374786Nattkemper, T. W., Ritter, H., & Schubert, W. (1999). Extracting Patterns of Lymphocyte Fluorescence from Digital Microscope Images. Intelligent Data Analysis in Medicine and Pharmacology (IDAMAP 99), Workshop Notes, 79-88. AMIA 1999, Washington DC.PUB
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1998 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2714985Heidemann, G., Nattkemper, T. W., & Ritter, H. (1998). Farbe und Symmetrie für die datengetriebene Generierung prägnanter Fokuspunkte. In V. Rehrmann (Ed.), Koblenzer Schriften zur Informatik: Vol. 9. 4. Workshop Farbbildverarbeitung (pp. 65-71). Koblenz: Fölbach.PUB
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1996 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2715168Heidemann, G., Nattkemper, T. W., Menkhaus, G., & Ritter, H. (1996). Blicksteuerung durch präattentive Fokussierungspunkte. In B. Mertsching (Ed.), Proceedings in artificial intelligence: Vol. 4. Aktives Sehen in technischen und biologischen Systemen : Beiträge zum Workshop der GI-Fachgruppe 1.0.4 Bildverstehen, 3. und 4. Dezember 1996, Hamburg (pp. 109-116). Sankt Augustin: Infix.PUB