Tim Wilhelm Nattkemper
tim.nattkemper@uni-bielefeld.dehttps://orcid.org/0000-0002-7986-1158
PEVZ-ID
207 Publikationen
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2984580Rogers, Alex David, Appiah-Madson, Hannah, Ardron, Jeff A., Bax, Nicholas J., Bhadury, Punyasloke, Brandt, Angelika, Buttigieg, Pier-Luigi, et al. 2023. “Accelerating ocean species discovery and laying the foundations for the future of marine biodiversity research and monitoring”. Frontiers in Marine Science 10: 1224471.
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2981135van Kevelaer, Robin, Langenkämper, Daniel, Nilssen, Ingunn, Buhl-Mortensen, Pål, and Nattkemper, Tim Wilhelm. 2023. “A data science approach for multi-sensor marine observatory data monitoring cold water corals (Paragorgia arborea) in two campaigns”. PLOS ONE 18 (7): e0282723.
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979717Momber, Andreas W., Langenkämper, Daniel, Möller, Torben, and Nattkemper, Tim Wilhelm. 2023. “The exploration and annotation of large amounts of visual inspection data for protective coating systems on stationary marine steel structures”. Ocean Engineering 278: 114337.
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2969165Kloster, Michael, Burfeid-Castellanos, Andrea M., Langenkämper, Daniel, Nattkemper, Tim Wilhelm, and Beszteri, Bánk. 2023. “Improving deep learning-based segmentation of diatoms in gigapixel-sized virtual slides by object-based tile positioning and object integrity constraint”. PLOS ONE 18 (2): e0272103.
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2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2968512Momber, Andreas, Langenkämper, Daniel, Möller, Torben, and Nattkemper, Tim Wilhelm. 2023. “Eine Online-Plattform für die Verarbeitung digitaler visueller Daten zur Zustandsbeschreibung von Beschichtungssystemen an maritimen Stahlbauten”. Stahlbau .
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965093Langenkämper, Daniel, Mogstad, Aksel Alstad, Hansen, Ingrid Myrnes, Baussant, Thierry, Bergsagel, Oystein, Nilssen, Ingunn, Frost, Tone Karin, and Nattkemper, Tim Wilhelm. 2022. “Exploring time series of hyperspectral images for cold water coral stress response analysis”. PLoS ONE 17 (8): e0272408.
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964556Tan, Mingkun, Langenkämper, Daniel, and Nattkemper, Tim Wilhelm. 2022. “The Impact of Data Augmentations on Deep Learning-Based Marine Object Classification in Benthic Image Transects”. Sensors 22 (14): 5383.
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964311Tzanakis, Konstantinos, Nattkemper, Tim Wilhelm, Niehaus, Karsten, and Albaum, Stefan. 2022. “MetHoS: a platform for large-scale processing, storage and analysis of metabolomics data”. BMC Bioinformatics 23 (1): 267.
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2966492Burfeid-Castellanos, Andrea M., Kloster, Michael, Beszteri, Sára, Postel, Ute, Spyra, Marzena, Zurowietz, Martin, Nattkemper, Tim Wilhelm, and Beszteri, Bánk. 2022. “A Digital Light Microscopic Method for Diatom Surveys Using Embedded Acid-Cleaned Samples”. Water 14 (20): 3332.
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964509Schoening, Timm, Durden, Jennifer M, Faber, Claas, Felden, Janine, Heger, Karl, Hoving, Henk-Jan T, Kiko, Rainer, et al. 2022. “Making marine image data FAIR”. Scientific data 9 (1): 414.
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964756Schoening, Timm, Durden, Jennifer M, Faber, Claas, Felden, Janine, Heger, Karl, Hoving, Henk-Jan T, Kiko, Rainer, et al. 2022. “Publisher Correction: Making marine image data FAIR”. Scientific Data 9 (1): 445.
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2962701Momber, Andreas W., Nattkemper, Tim Wilhelm, Langenkämper, Daniel, Möller, Torben, Bruen, Daniel, Schaumann, Peter, and Shojai, Sulaiman. 2022. “Corrigendum to “A data-based model for condition monitoring and maintenance planning for protective coating systems for wind tower structures” [Renew. Energy 186 (2022) 957–973]”. Renewable Energy 188: 1184.
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2960547Momber, Andreas W., Nattkemper, Tim Wilhelm, Langenkämper, Daniel, Möller, Torben, Brün, Daniel, Schaumann, Peter, and Shojai, Suleiman. 2022. “A data-based model for condition monitoring and maintenance planning for protective coating systems for wind tower structures”. Renewable Energy.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959631Zurowietz, Martin, and Nattkemper, Tim Wilhelm. 2021. “Current Trends and Future Directions of Large Scale Image and Video Annotation: Observations From Four Years of BIIGLE 2.0”. Frontiers in Marine Science 8: 760036.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952736Canals, Miquel, Pham, Christopher K., Bergmann, Melanie, Gutow, Lars, Hanke, Georg, van Sebille, Erik, Angiolillo, Michela, et al. 2021. “The quest for seafloor macrolitter: a critical review of background knowledge, current methods and future prospects”. Environmental Research Letters 16 (2): 023001.
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2960196Momber, Andreas W., Möller, Torben, Langenkämper, Daniel, Nattkemper, Tim Wilhelm, and Bruen, Daniel. 2021. “A Digital Twin concept for the prescriptive maintenance of protective coating systems on wind turbine structures”. Wind Engineering: 0309524X211060550.
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2949959Muskat, Linda, Kerkhoff, Yannic, Humbert, Pascal, Nattkemper, Tim Wilhelm, Eilenberg, Jørgen, and Patel, Anant V. 2021. “Image analysis-based quantification of fungal sporulation by automatic conidia counting and gray value correlation”. MethodsX: 101218.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956291Momber, Andreas, Nattkemper, Tim Wilhelm, Langenkämper, Daniel, Möller, Torben, Bruen, Daniel, Schaumann, Peter, and Shojai, Sulaiman. 2021. “Digitalisierung und Verarbeitung von Sensordaten für die Zustandsbewertung von Oberflächenschutzsystemen stählerner Türme von Onshore-Windenergieanlagen”. Stahlbau 90 (7): 528-541.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2951226Wüllems, Karsten, Zurowietz, Annika, Zurowietz, Martin, Schneider, Roland, Bednarz, Hanna, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. 2021. “Fast Visual Exploration of Mass Spectrometry Images with Interactive Dynamic Spectral Similarity Pseudocoloring”. Scientific Reports 11: 4606.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2950877Möller, Torben, and Nattkemper, Tim Wilhelm. 2021. “ALMI - A Generic Active Learning System for Computational Object Classification in Marine Observation Images”. Sensors 21 (4): 1134.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942079Gemeinholzer, Birgit, Vences, Miguel, Beszteri, Bank, Bruy, Teddy, Felden, Janine, Kostadinov, Ivaylo, Mirailes, Aurelien, et al. 2020. “Data storage and data re-use in taxonomy-the need for improved storage and accessibility of heterogeneous data”. ORGANISMS DIVERSITY & EVOLUTION 20 (1): 1-8.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945723Kloster, Michael, Langenkämper, Daniel, Zurowietz, Martin, Beszteri, Bánk, and Nattkemper, Tim Wilhelm. 2020. “Deep learning-based diatom taxonomy on virtual slides”. Scientific Reports 10 (1): 14416.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943901Zurowietz, Martin, and Nattkemper, Tim Wilhelm. 2020. “An Interactive Visualization for Feature Localization in Deep Neural Networks”. Frontiers in Artificial Intelligence - Machine Learning and Artificial Intelligence 3: 49.
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2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2943127Miralles, Aurelien, Bruy, Teddy, Wolcott, Katherine, Scherz, Mark D, Begerow, Dominik, Beszteri, Bank, Bonkowski, Michael, et al. 2020. “Repositories for Taxonomic Data: Where We Are and What is Missing.”. Systematic biology.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945097Zurowietz, Martin, and Nattkemper, Tim Wilhelm. 2020. “Unsupervised Knowledge Transfer for Object Detection in Marine Environmental Monitoring and Exploration”. IEEE Access 8.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948381Langenkämper, Daniel, Zurowietz, Martin, Schoening, Timm, and Nattkemper, Tim Wilhelm. 2020. “Corrigendum: BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections”. Frontiers in Marine Science 7: 617268.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944758Langenkämper, Daniel, van Kevelaer, Robin, Purser, Autun, and Nattkemper, Tim Wilhelm. 2020. “Gear-Induced Concept Drift in Marine Images and Its Effect on Deep Learning Classification”. Frontiers in Marine Science 7: 506.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936089Wüllems, Karsten, Kölling, Jan, Bednarz, Hanna, Niehaus, Karsten, Hans, Volkmar H., and Nattkemper, Tim Wilhelm. 2019. “Detection and visualization of communities in mass spectrometry imaging data.”. BMC Bioinformatics 20 (1): 303.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936069Langenkämper, Daniel, Simon-Lledó, Erik, Hosking, Brett, Jones, Daniel O. B., and Nattkemper, Tim Wilhelm. 2019. “On the impact of Citizen Science-derived data quality on deep learning based classification in marine images”. PLOS ONE 14 (6): e0218086.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931637Nattkemper, Tim Wilhelm, and Hattab, Georges. 2019. “SeeVis — 3D space-time cube rendering for visualization of microfluidics image data”. Bioinformatics 35 (10): 1802-1804.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935488Osterloff, Jonas, Nilssen, Ingunn, Jarnegren, Johanna, Van Engeland, Tom, Buhl-Mortensen, Pal, and Nattkemper, Tim Wilhelm. 2019. “Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory.”. Scientific reports 9 (1): 6578.
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2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2935366Zurowietz, Martin, Langenkämper, Daniel, and Nattkemper, Tim Wilhelm. 2019. “BIIGLE2Go - A scalable image annotation system for easy deployment on cruises”. In Proceedings of IEEE OCEANS 2019.
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2019 | Konferenzbeitrag | Im Druck | PUB-ID: 2937705Möller, Torben, Langenkämper, Daniel, and Nattkemper, Tim Wilhelm. In Press. “Wind turbine segmentation performing kNN-clustering on superpixel segmentations”. In Image and Signal Processing for Remote Sensing XXV, ed. Lorenzo Bruzzone and Francesca Bovolo. Vol. 11155. Image and Signal Processing for Remote Sensing XXV. Proceedings.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918218Hattab, Georges, Wiesmann, Veit, Becker, Anke, Munzner, Tamara, and Nattkemper, Tim Wilhelm. 2018. “A Novel methodology for characterizing cell subpopulations in automated time-lapse microscopy”. Frontiers in Bioengineering and Biotechnology 6: 17.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932066Zurowietz, Martin, Langenkämper, Daniel, Hosking, Brett, Ruhl, Henry, and Nattkemper, Tim Wilhelm. 2018. “MAIA - A machine learning assisted image annotation method for environmental monitoring and exploration ”. PLoS ONE 13 (11): e0207498.
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2018 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2921040Möller, Torben, Nillsen, Ingunn, and Nattkemper, Tim Wilhelm. 2018. “Tracking Sponge Size and Behaviour with Fixed Underwater Observatories”. In Pattern Recognition and Information Forensics. ICPR 2018 International Workshops, CVAUI, IWCF, and MIPPSNA, Beijing, China, August 20-24, 2018, Revised Selected Papers, ed. Zhaoxiang Zhang, David Suter, Yingli Tian, Alexandra Branzan Albu, Nicolas Sidère, and Hugo Jair Escalante, 11188:45-54. Lecture Notes in Computer Science. Cham: Springer.
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2018 | Konferenzbeitrag | Angenommen | PUB-ID: 2921039Langenkämper, Daniel, van Kevelaer, Robin, and Nattkemper, Tim Wilhelm. Accepted. “Strategies for Tackling the Class Imbalance Problem in Marine Image Classification”. Presented at the International Conference on Pattern Recognition 2018, Computer Vision for Automated Analysis of Underwater Imagery Workshop, Beijing .
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911830Hattab, Georges, Schlüter, Jan-Philip, Becker, Anke, and Nattkemper, Tim Wilhelm. 2017. “ViCAR: An Adaptive and Landmark-Free Registration of Time Lapse Image Data from Microfluidics Experiments”. Frontiers in Genetics 8: 69.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909190Langenkämper, Daniel, Zurowietz, Martin, Schoening, Timm, and Nattkemper, Tim Wilhelm. 2017. “BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections”. Frontiers in Marine Science 4 (March): 83.
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2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2915349Möller, Torben, Nilssen, Ingunn, and Nattkemper, Tim Wilhelm. 2017. “Active learning for the classification of species in underwater images from a fixed observatory”. In Proceedings of The IEEE International Conference on Computer Vision Workships (ICCVW), 2891-2897. Piscataway, NJ: IEEE.
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2017 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2908753Osterloff, Jonas, Möller, Torben, Nilssen, Ingunn, and Nattkemper, Tim Wilhelm. 2017. “Extracting Scalar Quantities from Underwater Images - a Toolbox for Image Data from Fixed Observatories.”. Presented at the Marine Imaging Workshop 2017, Kiel .
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901477Ahmed Raza, Shan E, Langenkämper, Daniel, Sirinukunwattana, Korsuk, Epstein, David, Nattkemper, Tim Wilhelm, and Rajpoot, Nasir M. 2016. “Robust normalization protocols for multiplexed fluorescence bioimage analysis”. BioData Mining 9 (1): 11.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900943Langenkämper, Daniel, Jakobi, Tobias, Feld, Dustin, Jelonek, Lukas, Goesmann, Alexander, and Nattkemper, Tim Wilhelm. 2016. “Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations”. Frontiers in Genetics 7: 5.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903712Osterloff, Jonas, Nilssen, Ingunn, Eide, Ingvar, de Oliveira Figueiredo, Marcia Abreu, de Souza Tâmega, Frederico Tapajós, and Nattkemper, Tim Wilhelm. 2016. “Computational Visual Stress Level Analysis of Calcareous Algae Exposed to Sedimentation”. PLOS ONE 11 (6): e0157329.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907705Brink, Benedikt, Seidel, Annica, Kleinbölting, Nils, Nattkemper, Tim Wilhelm, and Albaum, Stefan. 2016. “Omics Fusion - A Platform for Integrative Analysis of Omics Data”. Journal of Integrative Bioinformatics 13 (4: SI): 296.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901413Gorzolka, Karin, Kölling, Jan, Nattkemper, Tim Wilhelm, and Niehaus, Karsten. 2016. “Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging”. PLOS ONE 11 (3): e0150208.
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2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2904671Möller, Torben, Nilssen, Ingunn, and Nattkemper, Tim Wilhelm. 2016. “Change Detection in Marine Observatory Image Streams using Bi-Domain Feature Clustering”. In 2016 23rd International Conference on Pattern Recognition (ICPR), 793-798. Piscataway, NJ: IEEE.
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2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2906524Möller, Torben, Nilssen, Ingunn, and Nattkemper, Tim Wilhelm. 2016. “Data-driven Long Term Change Analysis in Marine Observatory Image Streams”. In 2016 ICPR 2nd Workshop on Computer Vision for Analysis of Underwater Imagery (CVAUI 2016) . Proceedings, 13-18. Piscataway, NJ: IEEE.
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2016 | Konferenzbeitrag | Angenommen | PUB-ID: 2904670Langenkämper, Daniel, and Nattkemper, Tim Wilhelm. Accepted. “COATL - A Learning Architecture for Online Real-Time Detection and Classification Assistance for Environmental Data”. In Proceedings of the International Conference on Pattern Recognition (ICPR).
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2016 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2903653Durden, Jennifer, Schoening, Timm, Althaus, Franziska, Friedmann, Ariell, Garica, Rafael, Glover, Adrian G., Greinert, Jens, et al. 2016. “Perspectives in Visual Imaging for Marine Biology and Ecology: From Acquisition to Understanding”. In Oceanography and Marine Biology: An Annual Review, ed. R.N. Hughes, D.J. Hughes, I.P. Smith, and A.C. Dale, 1-72. 54. Boca Raton: CRC Press.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903363Durden, Jennifer M, Bett, Brian J., Schoening, Timm, Morris, Kirsty J, Ruhl, Henry A, and Nattkemper, Tim Wilhelm. 2016. “Comparison of image annotation data generated by multiple investigators for benthic ecology”. Marine Ecology Progress Series 552: 61-70.
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2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2906522Osterloff, Jonas, Nilssen, Ingunn, Järnegren, Johanna, Buhl-Mortensen, Pål, and Nattkemper, Tim Wilhelm. 2016. “Polyp activity estimation and monitoring for cold water corals with a deep learning approach”. In Proceedigs of CVAUI 2016 (ICPR Workshop).
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2016 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2902749Osterloff, Jonas, Nilssen, Ingunn, and Nattkemper, Tim Wilhelm. 2016. “A computer vision approach for monitoring the spatial and temporal shrimp distribution at the LoVe observatory”. Methods in Oceanography 15-16: 114-128.
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2016 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2902857Schoening, Timm, Kuhn, Thomas, Jones, Daniel O. B., Simon-Lledo, Erik, and Nattkemper, Tim Wilhelm. Accepted. “Fully automated image segmentation for benthic resource assessment of poly-metallic nodules”. Methods in Oceanography 15-16: 78-89.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905905Nuno Gomes-Pereira, Jose, Auger, Vincent, Beisiegel, Kolja, Benjamin, Robert, Bergmann, Melanie, Bowden, David, Buhl-Mortensen, Pal, et al. 2016. “Current and future trends in marine image annotation software”. Progress in Oceanography 149: 106-129.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722138Kessler, Nikolas, Bonte, Anja, Albaum, Stefan, Mäder, Paul, Messmer, Monika, Goesmann, Alexander, Niehaus, Karsten, Langenkämper, Georg, and Nattkemper, Tim Wilhelm. 2015. “Learning to classify organic and conventional wheat - a machine-learning driven approach using the MeltDB 2.0 metabolomics analysis platform”. Frontiers in Bioinformatics and Computational Biology 3: 35.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2724431Schoening, Timm, Kuhn, Thomas, Bergmann, Melanie, and Nattkemper, Tim Wilhelm. 2015. “DELPHI - fast and adaptive computational laser point detection and visual footprint quantification for arbitrary underwater image collections”. Frontiers in Marine Science 2: 20.
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2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2775951Möller, Torben, Nilssen, Ingunn, Sumida, Paulo, Osterloff, Jonas, and Nattkemper, Tim Wilhelm. 2015. “Change Detection in underwater time laps videos from stationary observatories”. Presented at the GEOHAB, Salvador, Brazil .
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2015 | Datenpublikation | PUB-ID: 2777409Schlueter, Jan-Phillip, McIntosh, Matthew, Hattab, Georges, Nattkemper, Tim Wilhelm, and Becker, Anke. 2015. Phase Contrast and Fluorescence Bacterial Time-Lapse Microscopy Image Data. Bielefeld University.
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2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2775956Steinbrink, Björn, Schoening, Timm, Brün, Daniel, and Nattkemper, Tim Wilhelm. 2015. “Integrated Digital Marine Image Analysis and Management - new solutions to handle large image collections in environmental monitoring and exploration”. Presented at the GEOHAB, Salvador, Brazil .
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2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2735538Osterloff, Jonas, Nilssen, Ingunn, Möller, Torben, and Nattkemper, Tim Wilhelm. 2015. “Computational analysis of spatial species distribution for integrated stationary environmental monitoring”. Presented at the Geohab 2015, Salvador, Bahia, Brazil .
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2015 | Konferenzbeitrag | Im Druck | PUB-ID: 2775947Schoening, Timm, Langenkämper, Daniel, Steinbrink, Björn, Brün, Daniel, and Nattkemper, Tim Wilhelm. In Press. “Rapid image processing and classification in underwater exploration using advanced high performance computing”. In Proc. of the IEEE Oceans. Washington DC, USA: IEEE.
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2655889Osterloff, Jonas, Schoening, Timm, Bergmann, Melanie, and Nattkemper, Tim Wilhelm. 2014. “An overview and rating of benthic image pre-processings for color constancy”. Presented at the Marine Imaging Workshop, National Oceanography Centre, Southampton, UK , 1-1.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705712Langenkämper, Daniel, Goesmann, Alexander, and Nattkemper, Tim Wilhelm. 2014. “AKE - The Accelerated k-mer Exploration Web-Tool for Rapid Taxonomic Classification and Visualization”. BMC Bioinformatics 15 (1): 384.
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656048Möller, Torben, Nilssen, Ingunn, and Nattkemper, Tim Wilhelm. 2014. “Introduction of image-based water transparency descriptors to quantify marine snow and turbidity features. A study with data from a stationary observatory”. Presented at the MIW 2014 - Marine Imaging Workshop, Southampton .
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2706029Kessler, Nikolas, Walter, Frederik, Persicke, Marcus, Albaum, Stefan, Kalinowski, Jörn, Goesmann, Alexander, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. 2014. “ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and Mass Isotopomer Ratio Analysis”. PLoS ONE 9 (11): e113909.
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2014 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2683648Osterloff, Jonas, Schoening, Timm, Bergmann, Melanie, Durden, Jennifer M., Ruhl, Henry A., and Nattkemper, Tim Wilhelm. 2014. “Ranking Color Correction Algorithms using Cluster Indices”. Presented at the ICPR Workshop on Computer Vision for Analysis of Underwater Imagery, Stockhom .
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2690300Kölling, Jan, Zurowietz, Martin, and Nattkemper, Tim Wilhelm. 2014. “Interactive Exploration of Spatial Distribution in Mass Spectrometry Imaging”. Presented at the 4th Symposium on Biological Data Visualization (BioVis), Boston, MA, USA .
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2676320Osterloff, Jonas, Nilssen, Ingunn, de Oliveira Figueiredo, Marcia Abreu, de Souza Tâmega, Frederico Tapajós, Möller, Torben, and Nattkemper, Tim Wilhelm. 2014. “Automated Image based Biomass Quantification in Mesocosm Studies”. Presented at the Geohab 2014, Lorne, Victoria, Australia .
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2014 | Konferenzbeitrag | Im Druck | PUB-ID: 2690335Rathke, Magnus, Kölling, Jan, Gorzolka, Karin, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. In Press. “Interactive and dynamic web-based visual exploration of high dimensional bioimages with real time clustering”. Presented at the German Conference on Bioinformatics (GCB), Bielefeld, Germany .
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2014 | Kurzbeitrag Konferenz / Poster | Im Druck | PUB-ID: 2690436Kölling, Jan, Gorzolka, Karin, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. In Press. “Spatio-temporal analysis of metabolite profiles during barley germination”. Presented at the German Conference on Bioinformatics (GCB), Bielefeld, Germany .
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2690322Kölling, Jan, Zurowietz, Martin, and Nattkemper, Tim Wilhelm. 2014. “Interactive Exploration of Spatial Distribution in Mass Spectrometry Imaging”. Presented at the 22nd Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA, USA . ISCB.
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2676334Möller, Torben, Nilssen, Ingunn, Sumida, Paulo Yukio Gomes, Elbers, Karin Lütke, and Nattkemper, Tim Wilhelm. 2014. “Novelty detection in time lapse image data”. Presented at the Geohab 2014, Lorne, Victoria, Australia .
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2014 | Konferenzband | Veröffentlicht | PUB-ID: 2901695Giegerich, Robert, Hofestädt, Ralf, and Nattkemper, Tim Wilhelm, eds. 2014. “German Conference on Bioinformatics 2014”, GI-Edition: lecture notes in informatics, 235.
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2014 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2717407Schoening, Timm, Kuhn, Thomas, and Nattkemper, Tim Wilhelm. 2014. “Seabed Classification Using a Bag-of-Prototypes Feature Representation”. In Computer Vision for Analysis of Underwater Imagery (CVAUI), 2014 ICPR Workshop on, 17-24.
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2775961Schoening, Timm, Brün, Daniel, Kuhn, Thomas, and Nattkemper, Tim Wilhelm. 2014. “Image-based marine resource exploration and biodiversity assessment with MAMAS (Marine data Asset Management and Analysis System)”. Presented at the UMI (Underwater Mining Institute), Lisbon, Portugal .
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2610505Purser, Autun, Ontrup, Jörg, Schoening, Timm, Thomsen, Laurenz, Tong, R, Unnithan, Vikram, and Nattkemper, Tim Wilhelm. 2013. “Microhabitat and shrimp abundance within a Norwegian cold-water coral ecosystem”. Biogeosciences 10 (9): 5779-5791.
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2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2610134Schoening, Timm, Steinbrink, Björn, Brün, Daniel, Kuhn, Thomas, and Nattkemper, Tim Wilhelm. In Press. “Ultra-fast segmentation and quantification of poly-metallic nodule coverage in high-resolution digital images”. In Proceedings of the UMI 2013.
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2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2537912Rubiano Castellanos, Claudia Consuelo, Merkle, Thomas, and Nattkemper, Tim Wilhelm. In Press. “Using random forest to find Nuclear Export Signals (NESs) in proteins of Arabidopsis thaliana”. Presented at the BIOINFORMATICS Conf., Barcelona, Spain .
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2013 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656054Schoening, Timm, Bergmann, Melanie, and Nattkemper, Tim Wilhelm. 2013. “A machine-learning system for the automated detection of megafauna and its applicability unseen footage”. Presented at the GEOHAB, Rome .
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2625914Bergmann, Thorsten, Maeder, U., Fiebich, M., Dickob, M., Nattkemper, Tim Wilhelm, and Anselmetti, Dario. 2013. “Categorization of two-photon microscopy images of human cartilage into states of osteoarthritis”. Osteoarthritis And Cartilage 21 (8): 1074-1082.
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2013 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2610762Nattkemper, Tim Wilhelm. 2013. “Cluster Analysis”. In Encyclopedia of Systems Biology, ed. Werner Dubitzky, Olaf Wolkenhauer, Kwang-Hyun Cho, and Hiroki Yokota. New York, NY : Springer.
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2013 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656093Kuhn, Thomas, Rühlemann, Carsten, Wiedicke-Hombach, Michael, Schoening, Timm, and Nattkemper, Tim Wilhelm. 2013. “Application of Hydro-Acoustic and Video Data for the Exploration of Manganese Nodule Fields”. Presented at the ISOPE OMS, Szczecin, Poland .
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2610129Kessler, Nikolas, Bonte, Anja, Langenkämper, Georg, Niehaus, Karsten, Goesmann, Alexander, and Nattkemper, Tim Wilhelm. 2013. “MeltDB 2.0 - Advances of the metabolomics software system”. Bioinformatics 29 (19): 2452-2459.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2542584Held, Christian, Nattkemper, Tim Wilhelm, Palmisano, Ralf, and Wittenberg, Thomas. 2013. “Approaches to automatic parameter fitting in a microscopy image segmentation pipeline: An exploratory parameter space analysis”. Journal of Pathology Informatics 4 (2): 5.
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2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2538625Bonte, Anja, Kessler, Nikolas, Nattkemper, Tim Wilhelm, Goesmann, Alexander, Cecile, Thonar, Mäder, Paul, Niehaus, Karsten, and Langenkämper, Georg. In Press. “Einsatz von Protein- und Metabolit-Profiling-Methoden zur Unterscheidung von ökologischem und konventionellem Weizen”. Presented at the 12. Wissenschaftstagung Ökologischer Landbau „Ideal und Wirklichkeit – Perspektiven Ökologischer Landbewirtschaftung“, Bonn, Germany .
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2494458Schoening, Timm, Bergmann, Melanie, Purser, Autun, Dannheim, Jennifer, Gutt, Julian, and Nattkemper, Tim Wilhelm. 2012. “Semi-automated image analysis for the assessment of megafaunal densities at the Arctic deep-sea observatory HAUSGARTEN”. PLoS ONE 7 (6): e38179.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2455753Raza, Shan-E-Ahmed, Epstein, David, Nattkemper, Tim Wilhelm, and Rajpoot, Nasir. 2012. “RAMTaB: Robust Alignment of Multi-Tag Bioimages”. PLoS ONE 7 (2): e30894.
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2012 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656105Figueiredo Creed, Marcia, Coutinho, R, Reynier, MV, Cesar Paiva, P, Villas, AB, Bôas, AB, Tapajó s de Souza Tâmega, Frederico, Nattkemper, Tim Wilhelm, and Eide, Ingvar. 2012. “Effects of drill cuttings on a deep water rhodolith bed: an integrated approach”. Presented at the V International Rhodolith Workshop, Granada, Spain .
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2012 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2656050Schoening, Timm, Kuhn, Thomas, and Nattkemper, Tim Wilhelm. 2012. “Estimation of poly-metallic nodule coverage in benthic images”. In Proc. of the 41st Conference of the Underwater Mining Institute (UMI).
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2012 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656067Schoening, Timm, Bergmann, Melanie, Purser, Autun, Gutt, Julian, Dannheim, Jennifer, Taylor, James, Nattkemper, Tim Wilhelm, and Boetius, Antje. 2012. “The impact of experts’ inter- and intra-observer agreements on computational object classification in images from the deep seafloor of the HAUSGARTEN observatory.”. Presented at the 13th International Deep-Sea Biology Symposium, Wellington, New Zealand .
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2012 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2515687Kölling, Jan, Rathke, Magnus, Abouna, Sylvie, Khan, Mike, and Nattkemper, Tim Wilhelm. 2012. “Analyzing Multi-Tag Bioimages with BIOIMAX colocation mining tools”. Presented at the IEEE International Symposium on BIOMEDICAL IMAGING (ISBI), Barcelona .
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498232Trötschel, C, Albaum, Stefan, Wolff, D, Schröder, S, Goesmann, Alexander, Nattkemper, Tim Wilhelm, and Poetsch, A. 2012. “Protein turnover quantification in a multi-labeling approach - from data calculation to evaluation”. Molecular & Cellular Proteomics 11 (8): 512-526.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2536156Zhou, Luxian, Pelengaris, Stella, Abouna, Sylvie, Young, James, Epstein, David, Herold, Julia, Nattkemper, Tim Wilhelm, Nakhai, Hassan, and Khan, Michael. 2012. “Re-Expression of IGF-II Is Important for Beta Cell Regeneration in Adult Mice”. PLoS ONE 7 (9): e43623.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2481783Kölling, Jan, Langenkämper, Daniel, Sylvie, Abouna, Michale, Khan, and Nattkemper, Tim Wilhelm. 2012. “WHIDE - A web tool for visual data mining colocation patterns in multivariate bioimages”. Bioinformatics 28 (8): 1143-1150.
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2012 | Konferenzbeitrag | PUB-ID: 2515700Schoening, Timm, Bergmann, Melanie, Boetius, Antje, and Nattkemper, Tim Wilhelm. 2012. “Investigation of hidden parameters influencing the automated object detection in benthic images”. Presented at the IEEE OCEANS 2012 MTS/IEEE, Hampton Roads, Virginia, USA .
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2012 | Konferenzbeitrag | PUB-ID: 2515671Held, Christian, Nattkemper, Tim Wilhelm, and Wittenberg, Thomas. 2012. “Approaches to automatic parameter fitting in a microscopy image segmentation pipeline: An exploratory parameter space analysis”. Presented at the Histopathology Image Analysis (HIMA) workshop at MICCAI 2012, Nizza .
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300114Loyek, Christian, Bunkowski, Alexander, Vautz, Wolfgang, and Nattkemper, Tim Wilhelm. 2011. “Web2.0 paves new ways for collaborative and exploratory analysis of Chemical Compounds in Spectrometry Data”. Journal of Integrative Bioinformatics 8 (2): 158.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300063Albaum, Stefan, Hahne, H., Otto, A., Haußmann, U., Becher, D., Poetsch, A., Goesmann, Alexander, and Nattkemper, Tim Wilhelm. 2011. “A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study”. Proteome Science 9 (1): 30.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300073Martin, Christian, Tauchen, Annika, Becker, Anke, and Nattkemper, Tim Wilhelm. 2011. “A Normalized Tree Index for identification of correlated clinical parameters in microarray data”. BioData Mining 4 (1): 2.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300082Loyek, Christian, Khan, Michael, Rajpoot, Nasir, and Nattkemper, Tim Wilhelm. 2011. “BIOIMAX - A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data”. BMC Bioinformatics 12 (1): 297.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300092Bergmann, Melanie, Langwald, Nina, Ontrup, Jörg, Soltwedel, Thomas, Schewe, Ingo, Klages, Michael, and Nattkemper, Tim Wilhelm. 2011. “Megafaunal assemblages from two shelf stations west of Svalbard”. Marine Biology Research 7 (6): 525-539.
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300232Loyek, Christian, Kölling, Jan, Langenkämper, Daniel, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. 2011. “A Web2.0 Strategy for the Collaborative Analysis of Complex Bioimages”. In Advances in Intelligent Data Analysis X: 10th International Symposium, IDA 2011, Porto, Portugal, October 29-31, 2011. Proceedings, ed. João Gama, Elizabeth Bradley, and Jaakko Hollmén, 7014:258-269. Lecture Notes in Computer Science. Berlin, Heidelberg: Springer.
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300237Langenkämper, Daniel, Kölling, Jan, Khan, Michael, Rajpoot, Nasir, and Nattkemper, Tim Wilhelm. 2011. “Towards Protein Network Analysis using TIS Imaging and Exploratory Data Analysis”. Presented at the Workshop on Computational Systems Biology (WCSB), Zürich, Switzerland .
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2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656082Purser, Autun, Ontrup, Jörg, Schoening, Timm, Thomsen, Laurenz, Unnithan, Vikram, and Nattkemper, Tim Wilhelm. 2011. “How to squeeze even more from your Terabytes of video data!”. Presented at the , 8:3-4. Hermione Newsletter.
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2011 | Konferenzbeitrag | Im Druck | PUB-ID: 2315356Bergmann, Thorsten, Fiebich, T.M., Nattkemper, Tim Wilhelm, and Anselmetti, Dario. In Press. “Categorization of 2-photon microscopy images of human articular cartilage into states of arthritis”. Presented at the Tagung der Biomedizinischen Technik (BMT), Freiburg, Germany . Freiburg, Germany.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300102Arif, Muhammad, Rajpoot, Nasir, Technow, Ulrike, Chakraborty, Trinad, Fisch, Nicole, Jensen, Nickels A., Niehaus, Karsten, and Nattkemper, Tim Wilhelm. 2011. “Quantification of Cell Infection Caused by Listeria monocytogenes Invasion”. Journal of Biotechnology 154 (1): 76-83.
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2323705Langenkämper, Daniel, Kölling, Jan, Abouna, Sylvie, Khan, Michael, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. 2011. “TICAL - a web-tool for multivariate image clustering and data topology preserving visualization”. Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany .
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093532Scherbart, Alexandra, and Nattkemper, Tim Wilhelm. 2011. “Looking inside self-organizing map ensembles with resampling and negative correlation learning”. Neural Networks 24 (1): 130-141.
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300235Schoening, Timm, Hans, Volkmar, and Nattkemper, Tim Wilhelm. 2011. “Towards improved epilepsia diagnosis by unsupervised segmentation of neuropathology tissue sections using Ripley’s-L features”. In Bildverarbeitung für die Medizin 2011:Algorithmen - Systeme - Anwendungen Proceedings des Workshops vom 20. - 22. März 2011 in Lübeck, 44-48. Informatik aktuell. Berlin, Heidelberg: Springer.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929340Burgemeister, Sebastian, Nattkemper, Tim Wilhelm, Noll, Thomas, Hoffrogge, Raimund, and Flaschel, Erwin. 2010. “CellViCAM-Cell viability classification for animal cell cultures using dark field micrographs”. JOURNAL OF BIOTECHNOLOGY 149 (4): 310-316.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1794419Herold, Julia, Zhou, Luxian, Abouna, Sylvie, Pelengaris, Stella, Epstein, David, Khan, Michael, and Nattkemper, Tim Wilhelm. 2010. “Integrating semantic annotation and information visualization for the analysis of multichannel fluorescence micrographs from pancreatic tissue”. Computerized Medical Imaging and Graphics 34 (6): 446-452.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929311Gölzhäuser, Armin, Nattkemper, Tim Wilhelm, Niehaus, Karsten, Pühler, Alfred, and Sauer, Markus. 2010. “BioImaging: Contributions from biology, physics and informatics”. Journal of Biotechnology 149 (4): 227-228.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929335Herold, Julia, Schubert, Walter, and Nattkemper, Tim Wilhelm. 2010. “Automated detection and quantification of fluorescently labeled synapses in murine brain tissue sections for high throughput applications”. JOURNAL OF BIOTECHNOLOGY 149 (4): 299-309.
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018390Herold, Julia, Abouna, Sylvie, Zhou, Luxian, Pelengaris, Stella, Epstein, David BA, Khan, Michael, and Nattkemper, Tim Wilhelm. 2009. “A way towards analyzing high-content bioimage data by means of semantic annotation and visual data mining”. In SPIE Medical Imaging. SPIE.
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018427Qureshi, Hammad, Rajpoot, Nasir, Nattkemper, Tim Wilhelm, and Hans, Volkmar. 2009. “A Robust Adaptive Wavelet-based Method for Classification of Meningioma Histology Images”. In MICCAI«2009 Workshop on Optical Tissue Image Analysis in Microscopy, Histology, and Endoscopy.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635314Diaz, Naryttza N., Krause, Lutz, Goesmann, Alexander, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. 2009. “TACOA - Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach”. BMC Bioinformatics 10 (1): 56.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589531Albaum, Stefan, Neuweger, Heiko, Fraenzel, Benjamin, Lange, Sita, Mertens, Dominik, Troetschel, Christian, Wolters, Dirk, Kalinowski, Jörn, Nattkemper, Tim Wilhelm, and Goesmann, Alexander. 2009. “Qupe-a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments”. Bioinformatics 25 (23): 3128-3134.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588783Purser, Autun, Bergmann, Melanie, Ontrup, Jörg, and Nattkemper, Tim Wilhelm. 2009. “Use of machine-learning algorithms for the automated detection of cold-water coral habitats: a pilot study”. Marine Ecology Progress Series 397: 241-251.
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1591448Saalbach, Axel, Lange, Oliver, Nattkemper, Tim Wilhelm, and Meyer-Baese, Anke. 2009. “On the application of (topographic) independent and tree-dependent component analysis for the examination of DCE-MRI data”. In Biomedical Signal Processing and Control, 4:247-253. BIOMEDICAL SIGNAL PROCESSING AND CONTROL. ELSEVIER SCI LTD.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018405Loyek, Christian, Woermann, Friedrich G., and Nattkemper, Tim Wilhelm. 2008. “Detection of Focal Cortical Dysplasia in MRI Using Textural Features”. In Proceedings of BVM 2008, ed. Thomas Tolxdorff, 432-436. Informatik aktuell. Berlin, Heidelberg: Springer Verlag.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636280Timm, Wiebke, Scherbart, Alexandra, Boecker, Sebastian, Kohlbacher, Oliver, and Nattkemper, Tim Wilhelm. 2008. “Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics”. BMC Bioinformatics 9 (1): 443.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585611Wei, Ning, Flaschel, Erwin, Friehs, Karl, and Nattkemper, Tim Wilhelm. 2008. “A machine vision system for automated non-invasive assessment of cell viability via dark field microscopy, wavelet feature selection and classification”. BMC Bioinformatics 9 (1): 449.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587052Martin, Christian, Diaz, Naryttza N., Ontrup, Jörg, and Nattkemper, Tim Wilhelm. 2008. “Hyperbolic SOM-based clustering of DNA fragment features for taxonomic visualization and classification”. Bioinformatics 24 (14): 1568-1574.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588286Twellmann, Thorsten, Meyer-Baese, Anke, Lange, Oliver, Foo, Simon, and Nattkemper, Tim Wilhelm. 2008. “Model-free visualization of suspicious lesions in breast MRI based on supervised and unsupervised learning”. ENGINEERING APPLICATIONS OF ARTIFICIAL INTELLIGENCE 21 (2): 129-140.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783364Krause, Lutz, Diaz, Naryttza N., Goesmann, Alexander, Kelley, Scott, Nattkemper, Tim Wilhelm, Rohwer, Forest, Edwards, Robert A., and Stoye, Jens. 2008. “Phylogenetic classification of short environmental DNA fragments”. Nucleic Acids Research 36 (7): 2230-2239.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018409Martin, Christian, and Nattkemper, Tim Wilhelm. 2008. “A Tree Index to Support Clustering Based Exploratory Data Analysis”. In Bioinformatics Research and Development : Second International Conference, BIRD 2008 Vienna, Austria, July 7-9, 2008 Proceedings, 13:1-15. Communications in Computer and Information Science. Berlin, Heidelberg: Springer.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018435Scherbart, Alexandra, Timm, Wiebke, Böcker, Sebastian, and Nattkemper, Tim Wilhelm. 2008. “Improved Mass Spectrometry Peak Intensity Prediction by Adaptive Feature Weighting”. In International Conference on Neural Information Processing. Auckland, New Zealand.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018381Albaum, Stefan, Neuweger, Heiko, Lange, Sita, Mertens, Dominik, Runte, Kai, Kalinowski, Jörn, Nattkemper, Tim Wilhelm, and Goesmann, Alexander. 2008. “ProSE - "Software as a Service" for Quantitative Proteomics (Poster abstract)”. In HUPO 7th Annual World Congress.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018398Herold, Julia, Friedenberger, Manuela, Bode, Marcus, Rajpoot, Nasir, Schubert, Walter, and Nattkemper, Tim Wilhelm. 2008. “Flexible Synapse Detection in Fluorescence Micrographs by Modeling Human Expert Grading”. In Proc. of 2008 IEEE International Symposium on Biomedical Imaging.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630738Pobigaylo, Nataliya, Szymczak, Silke, Nattkemper, Tim Wilhelm, and Becker, Anke. 2008. “Identification of genes relevant to symbiosis and competitiveness in Sinorhizobium meliloti using signature-tagged mutants”. MOLECULAR PLANT-MICROBE INTERACTIONS 21 (2): 219-231.
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2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018412Martin, Christian, Díaz Solórzano, Naryttza Namelly, Ontrup, Jörg, and Nattkemper, Tim Wilhelm. 2007. “Genome feature exploration using hyperbolic Self-Organizing Maps”. In Proceedings of the 6th International Workshop on Self-Organizing Maps (WSOM 2007). Bielefeld: Bielefeld University.
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2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714045Scherbart, Alexandra, Timm, Wiebke, Böcker, Sebastian, and Nattkemper, Tim Wilhelm. 2007. “SOM-based Peptide Prototyping for Mass Spectrometry Peak Intensity Prediction”. In Proceedings of the 6th Workshop on Self-Organizing Maps (WSOM 07). Bielefeld: Bielefeld University.
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2007 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2714002Lessmann, Birgit, Wang, Yongjie, Bergmann, Melanie, Kämpfe, Tanja, and Nattkemper, Tim Wilhelm. 2007. “Use of automated image analysis to detect changes in megafaunal densities at HAUSGARTEN (79°N west off Svalbard) between 2002 and 2004”. Presented at the EMBS - 42nd European Marine Biology Symposium, Kiel, Germany .
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2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2714021Nattkemper, Tim Wilhelm, Degenhard, Andreas, and Twellmann, Thorsten. 2007. “Breast Tumor Classification and Visualization with Machine-Learning Approaches”. In Cancer Imaging - Lung and breast carcinomas, ed. M. A. Hayat, 1:309-321. Amsterdam : Academic Press.
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2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2714040Scherbart, Alexandra, Timm, Wiebke, Boecker, Sebastian, and Nattkemper, Tim Wilhelm. 2007. “Neural Network Approach for Mass Spectrometry Prediction by Peptide Prototyping”. In Artificial Neural Networks – ICANN 2007 - 17th International Conference, Porto, Portugal, September 9-13, 2007, Proceedings, Part II, ed. Joaquim Marque Sá de, 4669:90-99. Lecture Notes in Computer Science. Berlin: Springer.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714032Lessmann, Birgit, Nattkemper, Tim Wilhelm, Kessar, Preminda, Pointon, Linda, Khazen, Michael, Leach, Martin O, and Degenhard, Andreas. 2007. “Multiscale Analysis of MR Mammography Data”. Zeitschrift für Medizinische Physik (german journal of medical physics) 17 (3): 166-171.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595739Wei, Ning, You, Jia, Friehs, Karl, Flaschel, Erwin, and Nattkemper, Tim Wilhelm. 2007. “In situ dark field microscopy for on-line monitoring of yeast cultures”. BIOTECHNOLOGY LETTERS 29 (3): 373-378.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593120Wei, Ning, You, Jia, Friehs, Karl, Flaschel, Erwin, and Nattkemper, Tim Wilhelm. 2007. “An in situ probe for on-line monitoring of cell density and viability on the basis of dark field microscopy in conjunction with image processing and supervised machine learning”. Biotechnology and Bioengineering 97 (6): 1489-1500.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630749Lessmann, B., Nattkemper, Tim Wilhelm, Hans, V. H., and Degenhard, A. 2007. “A method for linking computed image features to histological semantics in neuropathology”. Journal of Biomedical Informatics 40 (6): 631-641.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783345Krause, Lutz, McHardy, Alice C., Nattkemper, Tim Wilhelm, Pühler, Alfred, Stoye, Jens, and Meyer, Folker. 2007. “GISMO - gene identification using a support vector machine for ORF classification”. Nucleic Acids Research 35 (2): 540-549.
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2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2018416Nattkemper, Tim Wilhelm, Degenhard, Andreas, and Twellmann, Thorsten. 2007. “Breas”. In Cancer Imaging - Lung and breast carcinomas, ed. M. A. Hayat, 1:309-324. Academic Press.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714075Deters grosse, Harmen, Timm, Wiebke, and Nattkemper, Tim Wilhelm. 2006. “REEFSOM - A Metaphoric Data Display for Exploratory Data Mining : journal of new media in neural and cognitive science and education”. Brains, Minds and Media 2 (bmm305).
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374232Varini, Claudio, Lessmann, Birgit, Degenhard, Andreas, Hans, Volkmar H., and Nattkemper, Tim Wilhelm. 2006. “Visual Exploration of Pathology Images by a Discrete Wavelet Transform Preprocessed Locally Linear Embedding.”. In Bildverarbeitung für die Medizin, ed. Heinz Handels, Jan Ehrhardt, Alexander Horsch, Hans-Peter Meinzer, Thomas Tolxdorff, and Gesellschaft für Informatik, 66-70. Informatik aktuell. Berlin : Springer.
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714148Twellmann, Thorsten, Lange, Oliver, Nattkemper, Tim Wilhelm, and Meyer, Anke. 2006. “Visualizations of Suspicious Lesions in Breast MRI Based on Intelligent Neural Systems”. In Intelligent Computing: Theory and Applications IV. Vol. 6229. Proceedings of SPIE. San Diego, CA: SPIE.
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374254Lessmann, Birgit, Nattkemper, Tim Wilhelm, Huth, Johannes, Loyek, Christian, Kessar, Preminda, Khazen, Michael, Pointon, Linda, Leach, Martin O., and Degenhard, Andreas. 2006. “Content Based Image Retrieval for Dynamic Time Series Data”. In Proceedings of BVM, 61-65.
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374494Timm, Wiebke, Böcker, Sebastian, Twellmann, Thorsten, and Nattkemper, Tim Wilhelm. 2006. “Peak intensity prediction for pmf mass spectra using support vector regression”. In Proc. of the 7th International FLINS Conference on Applied Artificial Intelligence, 565-572. WORLD SCIENTIFIC.
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714060Lessmann, Birgit, Hans, Volkmar, Degenhard, Andreas, and Nattkemper, Tim Wilhelm. 2006. “Feature space exploration of pathology images using Content-Based Database Visualization”. In Medical Imaging 2006: Image Processing. Vol. 6144. Proceedings of SPIE. San Diego, CA: SPIE.
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714065Varini, Claudio, Degenhard, Andreas, and Nattkemper, Tim Wilhelm. 2006. “Histologic Characterization of DCE-MRI Tumors with Dimensional Data Reduction”. In Medical Imaging 2006: Image Processing. Vol. 6144. Proceedings of SPIE. San Diego, CA: SPIE.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600329Miksch, Gerd, Bettenworth, F, Friehs, Karl, Flaschel, Erwin, Saalbach, A, and Nattkemper, Tim Wilhelm. 2006. “A rapid reporter system using GFP as a reporter protein for identification and screening of synthetic stationary-phase promoters in Escherichia coli”. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 70 (2): 229-236.
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1597259Martin, Christian, Deters, Harmen grosse, and Nattkemper, Tim Wilhelm. 2006. “Fusing biomedical multi-modal data for exploratory data analysis”. In ARTIFICIAL NEURAL NETWORKS - ICANN 2006, PT 2, ed. Stefanos Kollias, 4132:798-807. Berlin, Heidelberg: SPRINGER-VERLAG BERLIN.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598838Pobigaylo, N, Wetter, D, Szymczak, S, Schiller, U, Kurtz, S, Meyer, F, Nattkemper, Tim Wilhelm, and Becker, A. 2006. “Construction of a large signature-tagged mini-Tn5 transposon library and its application to mutagenesis of Sinorhizobium meliloti”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 72 (6): 4329-4337.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596731Varini, Claudio, Degenhard, Andreas, and Nattkemper, Tim Wilhelm. 2006. “Visual exploratory analysis of DCE-MRI data in breast cancer by dimensional data reduction: A comparative study”. BIOMEDICAL SIGNAL PROCESSING AND CONTROL 1 (1): 56-63.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603560Nattkemper, Tim Wilhelm, Arnrich, Bert, Lichte, Oliver, Timm, Wiebke, Degenhard, Andreas, Pointon, Linda, Hayes, Carmel, and Leach, Martin O. 2005. “Evaluation of radiological features for breast tumour classification in clinical screening with machine learning methods”. ARTIFICIAL INTELLIGENCE IN MEDICINE 34 (2): 129-139.
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714153Lessmann, Birgit, Nattkemper, Tim Wilhelm, Degenhard, Andreas, Pointon, Linda, Kessar, Preminda, Khazen, Michael, and Leach, Martin O. 2005. “Clustering approach for wavelet transformed MR image data”. In Proceedings of the 14th International Conference of Medical Physics, 1412.
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714331Saalbach, Axel, Twellmann, Thorsten, and Nattkemper, Tim Wilhelm. 2005. “Spectral Clustering for Data Categorization based on Self-Organizing Maps”. In Applications of Neural Networks and Machine Learning in Image Processing IX, ed. Nasrabadi Nasser M., 5673:12-18. San Jose, CA.
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2005 | Monographie | PUB-ID: 2714309Bettenworth, F., Miksch, Gerd, Fries, K., Flaschel, Erwin, Saalbach, Axel, Eickmeyer, Jens, and Nattkemper, Tim Wilhelm. 2005. An Online Monitoring System for the Screening of Stationary-Phase Promoters in E. Coli using GFP as a Reporter Protein.
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374666Twellmann, Thorsten, Lichte, Oliver, Saalbach, Axel, Wismüller, Axel, and Nattkemper, Tim Wilhelm. 2005. “An Adaptive Colour Scale for Comparison of Pseudo Colouring Techniques for DCE-MRI Data”. Presented at the Workshop für Bildverarbeiteung für die Medzin . Workshop für Bildverarbeituing für die Medizin 2005.
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374546Saalbach, Axel, Twellmann, Thorsten, Nattkemper, Tim Wilhelm, Wismüller, Axel, Ontrup, Jörg, and Ritter, Helge. 2005. “A hyperbolic topographic mapping for proximity data”. In Proc. of the IASTED International Conference of Artificial Intelligence and Applications, 2005:106-111.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714263Twellmann, Thorsten, Lichte, Oliver, and Nattkemper, Tim Wilhelm. 2005. “An Adaptive Tissue Characterisation Network for Model-Free Visualisation of Dynamic Contrast-Enhanced Magnetic Resonance Image Data”. IEEE Transactions on Medical Imaging 24 (10): 1256-1266.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714340Nattkemper, Tim Wilhelm, and Wismüller, Axel. 2005. “Tumour feature analysis with unsupervised machine learning”. Medical Image Analysis 9 (4): 344-351.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603030Nattkemper, Tim Wilhelm, and Wismuller, A. 2005. “Tumor feature visualization with unsupervised learning”. MEDICAL IMAGE ANALYSIS 9 (4): 344-351.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946602Wei, Ning, Flaschel, Erwin, Saalbach, Axel, Twellmann, Thorsten, and Nattkemper, Tim Wilhelm. 2005. “Reagent-free automatic cell viability determination using neural networks based machine vision and dark-field microscopy in Saccharomyces cerevisiae”. Conf Proc IEEE Eng Med Biol Soc 6: 6305-6308.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602344Prank, K, Schulze, E, Eckert, O, Nattkemper, Tim Wilhelm, Bettendorf, M, Maser-Gluth, C, Sejnowski, TJ, et al. 2005. “Machine learning approaches for phenotype-genotype mapping: predicting heterozygous mutations in the CYP21B gene from steroid profiles”. EUROPEAN JOURNAL OF ENDOCRINOLOGY 153 (2): 301-305.
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601519Varini, C, Degenhard, A, and Nattkemper, Tim Wilhelm. 2005. “ISOLLE: Locally linear embedding with geodesic distance”. In KNOWLEDGE DISCOVERY IN DATABASES: PKDD 2005, ed. Alípio Jorge, 3721:331-342. Lecture notes in computer science ; 3721 : Lecture notes in artificial intelligence. Berlin, Heidelberg: SPRINGER-VERLAG BERLIN.
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601848Miksch, Gerd, Bettenworth, F, Friehs, Karl, Flaschel, Erwin, Saalbach, A, Twellmann, Thorsten, and Nattkemper, Tim Wilhelm. 2005. “Libraries of synthetic stationary-phase and stress promoters as a tool for fine-tuning of expression of recombinant proteins in Escherichia coli”. In Journal of Biotechnology, 120:25-37. JOURNAL OF BIOTECHNOLOGY. ELSEVIER SCIENCE BV.
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601906Lessmann, B, Degenhard, A, Kessar, P, Pointon, L, Khazen, M, Leach, MO, and Nattkemper, Tim Wilhelm. 2005. “SOM-based wavelet filtering for the exploration of medical images”. In ARTIFICIAL NEURAL NETWORKS: BIOLOGICAL INSPIRATIONS - ICANN 2005, PT 1, PROCEEDINGS, ed. Włodzisław Duch, 3696:671-676. Lecture notes in computer science. Berlin, Heidelberg: SPRINGER-VERLAG BERLIN.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602177Twellmann, Thorsten, Lichte, O, and Nattkemper, Tim Wilhelm. 2005. “An adaptive tissue characterization network for model-free visualization of dynamic contrast-enhanced magnetic resonance image data”. IEEE TRANSACTIONS ON MEDICAL IMAGING 24 (10): 1256-1266.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1666510Twellmann, Thorsten, Saalbach, Axel, Gerstung, Olaf, Leach, Martin O, and Nattkemper, Tim Wilhelm. 2004. “Image fusion for dynamic contrast enhanced magnetic resonance imaging”. Biomed Eng Online 3 (1): 35.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946892Nattkemper, Tim Wilhelm. 2004. “Automatic segmentation of digital micrographs: a survey”. Stud Health Technol Inform 107 (Pt 2): 847-851.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946838Twellmann, Thorsten, Saalbach, Axel, Müller, C., Nattkemper, Tim Wilhelm, and Wismuller, Axel. 2004. “Detection of suspicious lesions in dynamic contrast enhanced MRI data”. The 26th Annual International Conference of the IEEE Engineering in Medicine and Biology Society 1: 454-457.
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2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714397Kämpfe, Tanja, Nattkemper, Tim Wilhelm, and Ritter, Helge. 2004. “AQUISAR: Image Retrieval in Underwater Webcam Images”. In WIAMIS 2004 : 5th International Workshop on Image Analysis for Multimedia Interactive Services. Lisboa, Portugal.
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2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714346Lessmann, Birgit, Twellmann, Thorsten, Degenhard, Andreas, Nattkemper, Tim Wilhelm, and Leach, Martin O. 2004. “Wavelet features for improved tumour detection in DCE-MRI”. In Proceedings of Medical Image Understanding and Analysis (MIUA), ed. Daniel Rueckert, Jo Hajnal, and Guang-Zhong Yang, 93-96. London, UK: BMVA.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714465Nattkemper, Tim Wilhelm. 2004. “Multivariate image analysis in biomedicine: a methodological review”. Journal of Biomedical Informatics 37 (5): 380-391.
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2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714382Saalbach, Axel, Twellmann, Thorsten, Nattkemper, Tim Wilhelm, White, M. J., Khazen, Michael, and Leach, Martin O. 2004. “Visualization of Multivariate Image Data using Image Fusion and Perceptually Optimized Color Scales based on sRGB”. In Medical Imaging 2004: Visualization, Image-Guided Procedures, and Display, ed. Jr. Robert L. Galloway. Vol. 5367. Proceedings of SPIE. San Diego, CA: SPIE.
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2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2375262Varini, Claudio, Nattkemper, Tim Wilhelm, Degenhard, Andreas, and Wismüller, Axel. 2004. “Visualisation of Breast Tumour DCE-MRI Data using LLE”. In Proc. Medical Image Understanding and Analysis (MIUA), 97-100. BMVA.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606041Nattkemper, Tim Wilhelm. 2004. “Multivariate image analysis in biomedicine”. JOURNAL OF BIOMEDICAL INFORMATICS 37 (5): 380-391.
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2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2017550Nattkemper, Tim Wilhelm, Schubert, Walter, Hermann, Thomas, and Ritter, Helge. 2004. “A Hybrid System for Cell Detection in Digital Micrographs”. In Biomedical Engineering, Proc., ed. B. Tilg. Vol. 417. Innsbruck, Austria: ACTA Press.
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2003 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2017545Nattkemper, Tim Wilhelm, Hermann, Thomas, Schubert, Walter, and Ritter, Helge. 2003. “Look & Listen: Sonification and Visualization of Multiparameter Micrographs”. In Engineering in Medicine and Biology Society. Proceedings of the 25th Annual International Conference of the IEEE, 2:1311-1314. Cancun, Mexico: IEEE.
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2003 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714487Twellmann, Thorsten, Saalbach, Axel, Nattkemper, Tim Wilhelm, and Ritter, Helge. 2003. “Artificial Neural Networks Machine Learning Approaches for Multivariate Image Analysis”. In Proceedings Linking mathematical and biological models in cancer research. Magdeburg.
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2003 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714496Ontrup, Jörg, Nattkemper, Tim Wilhelm, Gerstung, Olaf, and Ritter, Helge. 2003. “A MeSH Term based Distance Measure for Document Retrieval and Labeling Assistance”. In Proc. of EMBC2003. Cancun, Mexico: IEEE EMBS.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612741Nattkemper, Tim Wilhelm, Twellmann, Thorsten, Ritter, Helge, and Schubert, Walter. 2003. “Human vs. machine: evaluation of fluorescence micrographs”. Computers in Biology and Medicine 33 (1): 31-43.
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2002 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1613503Nattkemper, Tim Wilhelm, Wersing, Heiko, Schubert, Walter, and Ritter, Helge. 2002. “A neural network architecture for automatic segmentation of fluorescence micrographs”. In Neurocomputing, 48:357-367. NEUROCOMPUTING. ELSEVIER SCIENCE BV.
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1886441Schubert, W., Friedenberger, M., Haars, R., Bode, M., Philipsen, L., Nattkemper, Tim Wilhelm, and Ritter, Helge. 2002. “Automatic recognition of muscle invasive T-lymphocytes expressing dipeptidyl-peptidase IV (CD26) and analysis of the associated cell surface phenotypes”. Journal of Theoretical Medicine 4 (1): 67-74.
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2001 | Datenpublikation | PUB-ID: 2763993Hermann, Thomas, and Nattkemper, Tim Wilhelm. 2001. Multi-Channel Image Data Analysis using Sonification. Bielefeld University.
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2001 | Bielefelder E-Dissertation | PUB-ID: 2304068Nattkemper, Tim Wilhelm. 2001. A neural network-based system for high throughput fluorescence micrograph evaluation. Bielefeld (Germany): Bielefeld University.
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2001 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2375220Twellmann, Thorsten, Nattkemper, Tim Wilhelm, Schubert, Walter, and Ritter, Helge. 2001. “Cell Detection in Micrographs of Tissue Sections Using Support Vector Machines”. In Proc. of. ICANN 2001 Workshop on Kernel and Subspace Methods for Computer Vision.
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1617028Nattkemper, Tim Wilhelm, Ritter, Helge, and Schubert, Walter. 2001. “A neural classifier enabling high-throughput topological analysis of lymphocytes in tissue sections”. IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE 5 (2): 138-149.
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2001 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1886493Kämpfe, Tanja, Nattkemper, Tim Wilhelm, and Ritter, Helge. 2001. “Combining Independent Component Analysis and Self-organizing Maps for Cell Image Classification”. In Pattern Recognition, ed. Bernd Radig and Stefan Florczyk, 2191:262-268. LNCS. Berlin: Springer.
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2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2017374Hermann, Thomas, Nattkemper, Tim Wilhelm, Schubert, Walter, and Ritter, Helge. 2000. “Sonification of Multi-Channel Image Data”. In Proc. of the Mathematical and Engineering Techniques in Medical and Biological Sciences, ed. V. Falavar, 745-750. Las Vegas: CSREA Press.
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2000 | Datenpublikation | PUB-ID: 2701103Hermann, Thomas, Nattkemper, Tim Wilhelm, and Ritter, Helge. 2000. Supplementary Material for "Sonification of Multi-Channel Image Data". Bielefeld University.
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2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2375211Nattkemper, Tim Wilhelm, Wersing, Heiko, Schubert, Walter, and Ritter, Helge. 2000. “A Neural Network Architecture for Automatic Segmentation of Fluorescence Micrographs”. In Proc. of the 8th Europ. Symp. on Art. Neur. Netw. (ESANN), ed. Michel Verleysen.
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2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374799Nattkemper, Tim Wilhelm, Wersing, Heiko, Schubert, Walter, and Ritter, Helge. 2000. “Fluorescence Micrograph Segmentation by Gestalt-Based Feature Binding”. In Proc. of the Int. Joint Conf. on Neur. Netw. (IJCNN), 1:248-254. Como, Italy.
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2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714744Nattkemper, Tim Wilhelm, Wersing, Heiko, Schubert, Walter, and Ritter, Helge. 2000. “Automatic Evaluation of Multi-Parameter Fluorescence Micrographs with a Neural Network Architecture”. In Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, METMBS '00, 2:739-744. Las Vegas, USA.
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1999 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374786Nattkemper, Tim Wilhelm, Ritter, Helge, and Schubert, Walter. 1999. “Extracting Patterns of Lymphocyte Fluorescence from Digital Microscope Images”. In Intelligent Data Analysis in Medicine and Pharmacology (IDAMAP 99), Workshop Notes, 79-88. AMIA 1999, Washington DC.
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1998 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2714985Heidemann, Gunther, Nattkemper, Tim Wilhelm, and Ritter, Helge. 1998. “Farbe und Symmetrie für die datengetriebene Generierung prägnanter Fokuspunkte”. In 4. Workshop Farbbildverarbeitung, ed. Volker Rehrmann, 9:65-71. Koblenzer Schriften zur Informatik. Koblenz: Fölbach.
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1996 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2715168Heidemann, Gunther, Nattkemper, Tim Wilhelm, Menkhaus, G., and Ritter, Helge. 1996. “Blicksteuerung durch präattentive Fokussierungspunkte”. In Aktives Sehen in technischen und biologischen Systemen : Beiträge zum Workshop der GI-Fachgruppe 1.0.4 Bildverstehen, 3. und 4. Dezember 1996, Hamburg, ed. Bärbel Mertsching, 4:109-116. Proceedings in artificial intelligence. Sankt Augustin: Infix.