Tim Wilhelm Nattkemper
tim.nattkemper@uni-bielefeld.dehttps://orcid.org/0000-0002-7986-1158
PEVZ-ID
207 Publikationen
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2981135van Kevelaer R, Langenkämper D, Nilssen I, Buhl-Mortensen P, Nattkemper TW. A data science approach for multi-sensor marine observatory data monitoring cold water corals (Paragorgia arborea) in two campaigns. PLOS ONE. 2023;18(7): e0282723.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979717Momber AW, Langenkämper D, Möller T, Nattkemper TW. The exploration and annotation of large amounts of visual inspection data for protective coating systems on stationary marine steel structures. Ocean Engineering. 2023;278: 114337.PUB | DOI | WoS
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2969165Kloster M, Burfeid-Castellanos AM, Langenkämper D, Nattkemper TW, Beszteri B. Improving deep learning-based segmentation of diatoms in gigapixel-sized virtual slides by object-based tile positioning and object integrity constraint. PLOS ONE. 2023;18(2): e0272103.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2968512Momber A, Langenkämper D, Möller T, Nattkemper TW. Eine Online-Plattform für die Verarbeitung digitaler visueller Daten zur Zustandsbeschreibung von Beschichtungssystemen an maritimen Stahlbauten. Stahlbau . 2023.PUB | DOI | WoS
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964556Tan M, Langenkämper D, Nattkemper TW. The Impact of Data Augmentations on Deep Learning-Based Marine Object Classification in Benthic Image Transects. Sensors. 2022;22(14): 5383.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964311Tzanakis K, Nattkemper TW, Niehaus K, Albaum S. MetHoS: a platform for large-scale processing, storage and analysis of metabolomics data. BMC Bioinformatics. 2022;23(1): 267.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964509Schoening T, Durden JM, Faber C, et al. Making marine image data FAIR. Scientific data. 2022;9(1): 414.PUB | DOI | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964756Schoening T, Durden JM, Faber C, et al. Publisher Correction: Making marine image data FAIR. Scientific Data . 2022;9(1): 445.PUB | DOI | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2962701Momber AW, Nattkemper TW, Langenkämper D, et al. Corrigendum to “A data-based model for condition monitoring and maintenance planning for protective coating systems for wind tower structures” [Renew. Energy 186 (2022) 957–973]. Renewable Energy . 2022;188:1184.PUB | DOI | WoS
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959631Zurowietz M, Nattkemper TW. Current Trends and Future Directions of Large Scale Image and Video Annotation: Observations From Four Years of BIIGLE 2.0. Frontiers in Marine Science. 2021;8: 760036.PUB | Dateien verfügbar | DOI | Download (ext.) | WoS
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2960196Momber AW, Möller T, Langenkämper D, Nattkemper TW, Bruen D. A Digital Twin concept for the prescriptive maintenance of protective coating systems on wind turbine structures. Wind Engineering. 2021: 0309524X211060550.PUB | DOI | WoS
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2949959Muskat L, Kerkhoff Y, Humbert P, Nattkemper TW, Eilenberg J, Patel AV. Image analysis-based quantification of fungal sporulation by automatic conidia counting and gray value correlation. MethodsX. 2021: 101218.PUB | DOI | WoS | PubMed | Europe PMC
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956291Momber A, Nattkemper TW, Langenkämper D, et al. Digitalisierung und Verarbeitung von Sensordaten für die Zustandsbewertung von Oberflächenschutzsystemen stählerner Türme von Onshore-Windenergieanlagen. Stahlbau. 2021;90(7):528-541.PUB | DOI | WoS
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2951226Wüllems K, Zurowietz A, Zurowietz M, et al. Fast Visual Exploration of Mass Spectrometry Images with Interactive Dynamic Spectral Similarity Pseudocoloring. Scientific Reports. 2021;11: 4606.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2950877Möller T, Nattkemper TW. ALMI - A Generic Active Learning System for Computational Object Classification in Marine Observation Images. Sensors. 2021;21(4): 1134.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945723Kloster M, Langenkämper D, Zurowietz M, Beszteri B, Nattkemper TW. Deep learning-based diatom taxonomy on virtual slides. Scientific Reports. 2020;10(1): 14416.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943901Zurowietz M, Nattkemper TW. An Interactive Visualization for Feature Localization in Deep Neural Networks. Frontiers in Artificial Intelligence - Machine Learning and Artificial Intelligence . 2020;3: 49.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2943127Miralles A, Bruy T, Wolcott K, et al. Repositories for Taxonomic Data: Where We Are and What is Missing. Systematic biology. 2020.PUB | DOI | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945097Zurowietz M, Nattkemper TW. Unsupervised Knowledge Transfer for Object Detection in Marine Environmental Monitoring and Exploration. IEEE Access. 2020;8.PUB | PDF | DOI | Download (ext.) | WoS
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948381Langenkämper D, Zurowietz M, Schoening T, Nattkemper TW. Corrigendum: BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections. Frontiers in Marine Science. 2020;7: 617268.PUB | DOI | Download (ext.) | WoS
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936069Langenkämper D, Simon-Lledó E, Hosking B, Jones DOB, Nattkemper TW. On the impact of Citizen Science-derived data quality on deep learning based classification in marine images. PLOS ONE. 2019;14(6): e0218086.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931637Nattkemper TW, Hattab G. SeeVis — 3D space-time cube rendering for visualization of microfluidics image data. Bioinformatics. 2019;35(10):1802-1804.PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935488Osterloff J, Nilssen I, Jarnegren J, Van Engeland T, Buhl-Mortensen P, Nattkemper TW. Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory. Scientific reports. 2019;9(1): 6578.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2935366Zurowietz M, Langenkämper D, Nattkemper TW. BIIGLE2Go - A scalable image annotation system for easy deployment on cruises. In: Proceedings of IEEE OCEANS 2019. 2019.PUB | DOI | Download (ext.)
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2019 | Konferenzbeitrag | Im Druck | PUB-ID: 2937705Möller T, Langenkämper D, Nattkemper TW. Wind turbine segmentation performing kNN-clustering on superpixel segmentations. In: Bruzzone L, Bovolo F, eds. Image and Signal Processing for Remote Sensing XXV. Image and Signal Processing for Remote Sensing XXV. Proceedings. Vol 11155. In Press.PUB
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918218Hattab G, Wiesmann V, Becker A, Munzner T, Nattkemper TW. A Novel methodology for characterizing cell subpopulations in automated time-lapse microscopy. Frontiers in Bioengineering and Biotechnology. 2018;6: 17.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932066Zurowietz M, Langenkämper D, Hosking B, Ruhl H, Nattkemper TW. MAIA - A machine learning assisted image annotation method for environmental monitoring and exploration . PLoS ONE. 2018;13(11): e0207498.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2018 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2921040Möller T, Nillsen I, Nattkemper TW. Tracking Sponge Size and Behaviour with Fixed Underwater Observatories. In: Zhang Z, Suter D, Tian Y, Branzan Albu A, Sidère N, Jair Escalante H, eds. Pattern Recognition and Information Forensics. ICPR 2018 International Workshops, CVAUI, IWCF, and MIPPSNA, Beijing, China, August 20-24, 2018, Revised Selected Papers. Lecture Notes in Computer Science. Vol 11188. Cham: Springer; 2018: 45-54.PUB | DOI
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2018 | Konferenzbeitrag | Angenommen | PUB-ID: 2921039Langenkämper D, van Kevelaer R, Nattkemper TW. Strategies for Tackling the Class Imbalance Problem in Marine Image Classification. Presented at the International Conference on Pattern Recognition 2018, Computer Vision for Automated Analysis of Underwater Imagery Workshop, Beijing.PUB | PDF
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909190Langenkämper D, Zurowietz M, Schoening T, Nattkemper TW. BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections. Frontiers in Marine Science. 2017;4(March): 83.PUB | Dateien verfügbar | DOI | WoS
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2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2915349Möller T, Nilssen I, Nattkemper TW. Active learning for the classification of species in underwater images from a fixed observatory. In: Proceedings of The IEEE International Conference on Computer Vision Workships (ICCVW). Piscataway, NJ: IEEE; 2017: 2891-2897.PUB
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901477Ahmed Raza SE, Langenkämper D, Sirinukunwattana K, Epstein D, Nattkemper TW, Rajpoot NM. Robust normalization protocols for multiplexed fluorescence bioimage analysis. BioData Mining. 2016;9(1): 11.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900943Langenkämper D, Jakobi T, Feld D, Jelonek L, Goesmann A, Nattkemper TW. Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations. Frontiers in Genetics. 2016;7: 5.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903712Osterloff J, Nilssen I, Eide I, de Oliveira Figueiredo MA, de Souza Tâmega FT, Nattkemper TW. Computational Visual Stress Level Analysis of Calcareous Algae Exposed to Sedimentation. PLOS ONE. 2016;11(6): e0157329.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907705Brink B, Seidel A, Kleinbölting N, Nattkemper TW, Albaum S. Omics Fusion - A Platform for Integrative Analysis of Omics Data. Journal of Integrative Bioinformatics. 2016;13(4: SI): 296.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2904671Möller T, Nilssen I, Nattkemper TW. Change Detection in Marine Observatory Image Streams using Bi-Domain Feature Clustering. In: 2016 23rd International Conference on Pattern Recognition (ICPR). Piscataway, NJ: IEEE; 2016: 793-798.PUB | DOI
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2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2906524Möller T, Nilssen I, Nattkemper TW. Data-driven Long Term Change Analysis in Marine Observatory Image Streams. In: 2016 ICPR 2nd Workshop on Computer Vision for Analysis of Underwater Imagery (CVAUI 2016) . Proceedings. Piscataway, NJ: IEEE; 2016: 13-18.PUB
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2016 | Konferenzbeitrag | Angenommen | PUB-ID: 2904670Langenkämper D, Nattkemper TW. COATL - A Learning Architecture for Online Real-Time Detection and Classification Assistance for Environmental Data. In: Proceedings of the International Conference on Pattern Recognition (ICPR). Accepted.PUB
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2016 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2903653Durden J, Schoening T, Althaus F, et al. Perspectives in Visual Imaging for Marine Biology and Ecology: From Acquisition to Understanding. In: Hughes RN, Hughes DJ, Smith IP, Dale AC, eds. Oceanography and Marine Biology: An Annual Review. 54. Boca Raton: CRC Press; 2016: 1-72.PUB | WoS
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722138Kessler N, Bonte A, Albaum S, et al. Learning to classify organic and conventional wheat - a machine-learning driven approach using the MeltDB 2.0 metabolomics analysis platform. Frontiers in Bioinformatics and Computational Biology. 2015;3: 35.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2724431Schoening T, Kuhn T, Bergmann M, Nattkemper TW. DELPHI - fast and adaptive computational laser point detection and visual footprint quantification for arbitrary underwater image collections. Frontiers in Marine Science. 2015;2: 20.PUB | PDF | DOI | WoS
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2015 | Datenpublikation | PUB-ID: 2777409Schlueter J-P, McIntosh M, Hattab G, Nattkemper TW, Becker A. Phase Contrast and Fluorescence Bacterial Time-Lapse Microscopy Image Data. Bielefeld University; 2015.PUB | Dateien verfügbar | DOI
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2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2775956Steinbrink B, Schoening T, Brün D, Nattkemper TW. Integrated Digital Marine Image Analysis and Management - new solutions to handle large image collections in environmental monitoring and exploration. Presented at the GEOHAB, Salvador, Brazil.PUB | PDF
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2015 | Konferenzbeitrag | Im Druck | PUB-ID: 2775947Schoening T, Langenkämper D, Steinbrink B, Brün D, Nattkemper TW. Rapid image processing and classification in underwater exploration using advanced high performance computing. In: Proc. of the IEEE Oceans. Washington DC, USA: IEEE; In Press.PUB
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2655889Osterloff J, Schoening T, Bergmann M, Nattkemper TW. An overview and rating of benthic image pre-processings for color constancy. Presented at the Marine Imaging Workshop, National Oceanography Centre, Southampton, UK.PUB
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705712Langenkämper D, Goesmann A, Nattkemper TW. AKE - The Accelerated k-mer Exploration Web-Tool for Rapid Taxonomic Classification and Visualization. BMC Bioinformatics. 2014;15(1): 384.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656048Möller T, Nilssen I, Nattkemper TW. Introduction of image-based water transparency descriptors to quantify marine snow and turbidity features. A study with data from a stationary observatory. Presented at the MIW 2014 - Marine Imaging Workshop, Southampton.PUB | PDF
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2706029Kessler N, Walter F, Persicke M, et al. ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and Mass Isotopomer Ratio Analysis. PLoS ONE. 2014;9(11): e113909.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2014 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2683648Osterloff J, Schoening T, Bergmann M, Durden JM, Ruhl HA, Nattkemper TW. Ranking Color Correction Algorithms using Cluster Indices. Presented at the ICPR Workshop on Computer Vision for Analysis of Underwater Imagery, Stockhom.PUB | DOI | Download (ext.)
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2690300Kölling J, Zurowietz M, Nattkemper TW. Interactive Exploration of Spatial Distribution in Mass Spectrometry Imaging. Presented at the 4th Symposium on Biological Data Visualization (BioVis), Boston, MA, USA.PUB | Download (ext.)
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2676320Osterloff J, Nilssen I, de Oliveira Figueiredo MA, de Souza Tâmega FT, Möller T, Nattkemper TW. Automated Image based Biomass Quantification in Mesocosm Studies. Presented at the Geohab 2014, Lorne, Victoria, Australia.PUB | PDF
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2014 | Konferenzbeitrag | Im Druck | PUB-ID: 2690335Rathke M, Kölling J, Gorzolka K, Niehaus K, Nattkemper TW. Interactive and dynamic web-based visual exploration of high dimensional bioimages with real time clustering. Presented at the German Conference on Bioinformatics (GCB), Bielefeld, Germany.PUB
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2690322Kölling J, Zurowietz M, Nattkemper TW. Interactive Exploration of Spatial Distribution in Mass Spectrometry Imaging. Presented at the 22nd Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA, USA.PUB | Download (ext.)
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2676334Möller T, Nilssen I, Sumida PYG, Elbers KL, Nattkemper TW. Novelty detection in time lapse image data. Presented at the Geohab 2014, Lorne, Victoria, Australia.PUB
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2014 | Konferenzband | Veröffentlicht | PUB-ID: 2901695Giegerich R, Hofestädt R, Nattkemper TW, eds. German Conference on Bioinformatics 2014. GI-Edition: lecture notes in informatics. 2014;235.PUB
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2775961Schoening T, Brün D, Kuhn T, Nattkemper TW. Image-based marine resource exploration and biodiversity assessment with MAMAS (Marine data Asset Management and Analysis System). Presented at the UMI (Underwater Mining Institute), Lisbon, Portugal.PUB
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2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2610134Schoening T, Steinbrink B, Brün D, Kuhn T, Nattkemper TW. Ultra-fast segmentation and quantification of poly-metallic nodule coverage in high-resolution digital images. In: Proceedings of the UMI 2013. In Press.PUB
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2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2537912Rubiano Castellanos CC, Merkle T, Nattkemper TW. Using random forest to find Nuclear Export Signals (NESs) in proteins of Arabidopsis thaliana. Presented at the BIOINFORMATICS Conf., Barcelona, Spain.PUB
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2013 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656054Schoening T, Bergmann M, Nattkemper TW. A machine-learning system for the automated detection of megafauna and its applicability unseen footage. Presented at the GEOHAB, Rome.PUB
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2625914Bergmann T, Maeder U, Fiebich M, Dickob M, Nattkemper TW, Anselmetti D. Categorization of two-photon microscopy images of human cartilage into states of osteoarthritis. Osteoarthritis And Cartilage. 2013;21(8):1074-1082.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2610762Nattkemper TW. Cluster Analysis. In: Dubitzky W, Wolkenhauer O, Cho K-H, Yokota H, eds. Encyclopedia of Systems Biology. New York, NY : Springer; 2013.PUB
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2013 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656093Kuhn T, Rühlemann C, Wiedicke-Hombach M, Schoening T, Nattkemper TW. Application of Hydro-Acoustic and Video Data for the Exploration of Manganese Nodule Fields. Presented at the ISOPE OMS, Szczecin, Poland.PUB
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2610129Kessler N, Bonte A, Langenkämper G, Niehaus K, Goesmann A, Nattkemper TW. MeltDB 2.0 - Advances of the metabolomics software system. Bioinformatics. 2013;29(19):2452-2459.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2542584Held C, Nattkemper TW, Palmisano R, Wittenberg T. Approaches to automatic parameter fitting in a microscopy image segmentation pipeline: An exploratory parameter space analysis. Journal of Pathology Informatics. 2013;4(2): 5.PUB | DOI | PubMed | Europe PMC
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2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2538625Bonte A, Kessler N, Nattkemper TW, et al. Einsatz von Protein- und Metabolit-Profiling-Methoden zur Unterscheidung von ökologischem und konventionellem Weizen. Presented at the 12. Wissenschaftstagung Ökologischer Landbau „Ideal und Wirklichkeit – Perspektiven Ökologischer Landbewirtschaftung“, Bonn, Germany.PUB
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2494458Schoening T, Bergmann M, Purser A, Dannheim J, Gutt J, Nattkemper TW. Semi-automated image analysis for the assessment of megafaunal densities at the Arctic deep-sea observatory HAUSGARTEN. PLoS ONE. 2012;7(6): e38179.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2455753Raza S-E-A, Epstein D, Nattkemper TW, Rajpoot N. RAMTaB: Robust Alignment of Multi-Tag Bioimages. PLoS ONE. 2012;7(2): e30894.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2012 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656105Figueiredo Creed M, Coutinho R, Reynier MV, et al. Effects of drill cuttings on a deep water rhodolith bed: an integrated approach. Presented at the V International Rhodolith Workshop, Granada, Spain.PUB
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2012 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2656050Schoening T, Kuhn T, Nattkemper TW. Estimation of poly-metallic nodule coverage in benthic images. In: Proc. of the 41st Conference of the Underwater Mining Institute (UMI). 2012.PUB
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2012 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656067Schoening T, Bergmann M, Purser A, et al. The impact of experts’ inter- and intra-observer agreements on computational object classification in images from the deep seafloor of the HAUSGARTEN observatory. Presented at the 13th International Deep-Sea Biology Symposium, Wellington, New Zealand.PUB
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498232Trötschel C, Albaum S, Wolff D, et al. Protein turnover quantification in a multi-labeling approach - from data calculation to evaluation. Molecular & Cellular Proteomics. 2012;11(8):512-526.PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2536156Zhou L, Pelengaris S, Abouna S, et al. Re-Expression of IGF-II Is Important for Beta Cell Regeneration in Adult Mice. PLoS ONE. 2012;7(9): e43623.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2481783Kölling J, Langenkämper D, Sylvie A, Michale K, Nattkemper TW. WHIDE - A web tool for visual data mining colocation patterns in multivariate bioimages. Bioinformatics. 2012;28(8):1143-1150.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2012 | Konferenzbeitrag | PUB-ID: 2515700Schoening T, Bergmann M, Boetius A, Nattkemper TW. Investigation of hidden parameters influencing the automated object detection in benthic images. Presented at the IEEE OCEANS 2012 MTS/IEEE, Hampton Roads, Virginia, USA.PUB
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2012 | Konferenzbeitrag | PUB-ID: 2515671Held C, Nattkemper TW, Wittenberg T. Approaches to automatic parameter fitting in a microscopy image segmentation pipeline: An exploratory parameter space analysis. Presented at the Histopathology Image Analysis (HIMA) workshop at MICCAI 2012, Nizza.PUB
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300114Loyek C, Bunkowski A, Vautz W, Nattkemper TW. Web2.0 paves new ways for collaborative and exploratory analysis of Chemical Compounds in Spectrometry Data. Journal of Integrative Bioinformatics. 2011;8(2):158.PUB | DOI | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300063Albaum S, Hahne H, Otto A, et al. A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study. Proteome Science. 2011;9(1): 30.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300232Loyek C, Kölling J, Langenkämper D, Niehaus K, Nattkemper TW. A Web2.0 Strategy for the Collaborative Analysis of Complex Bioimages. In: Gama J, Bradley E, Hollmén J, eds. Advances in Intelligent Data Analysis X: 10th International Symposium, IDA 2011, Porto, Portugal, October 29-31, 2011. Proceedings. Lecture Notes in Computer Science. Vol 7014. Berlin, Heidelberg: Springer; 2011: 258-269.PUB | PDF | DOI
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2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2656082Purser A, Ontrup J, Schoening T, Thomsen L, Unnithan V, Nattkemper TW. How to squeeze even more from your Terabytes of video data!.PUB
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2011 | Konferenzbeitrag | Im Druck | PUB-ID: 2315356Bergmann T, Fiebich TM, Nattkemper TW, Anselmetti D. Categorization of 2-photon microscopy images of human articular cartilage into states of arthritis. Presented at the Tagung der Biomedizinischen Technik (BMT), Freiburg, Germany.PUB
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300102Arif M, Rajpoot N, Technow U, et al. Quantification of Cell Infection Caused by Listeria monocytogenes Invasion. Journal of Biotechnology. 2011;154(1):76-83.PUB | DOI | PubMed | Europe PMC
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2323705Langenkämper D, Kölling J, Abouna S, Khan M, Niehaus K, Nattkemper TW. TICAL - a web-tool for multivariate image clustering and data topology preserving visualization. Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany.PUB | PDF | Download (ext.)
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093532Scherbart A, Nattkemper TW. Looking inside self-organizing map ensembles with resampling and negative correlation learning. Neural Networks. 2011;24(1):130-141.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300235Schoening T, Hans V, Nattkemper TW. Towards improved epilepsia diagnosis by unsupervised segmentation of neuropathology tissue sections using Ripley’s-L features. In: Bildverarbeitung für die Medizin 2011:Algorithmen - Systeme - Anwendungen Proceedings des Workshops vom 20. - 22. März 2011 in Lübeck. Informatik aktuell. Berlin, Heidelberg: Springer; 2011: 44-48.PUB | DOI
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929340Burgemeister S, Nattkemper TW, Noll T, Hoffrogge R, Flaschel E. CellViCAM-Cell viability classification for animal cell cultures using dark field micrographs. JOURNAL OF BIOTECHNOLOGY. 2010;149(4):310-316.PUB | DOI | WoS | PubMed | Europe PMC
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1794419Herold J, Zhou L, Abouna S, et al. Integrating semantic annotation and information visualization for the analysis of multichannel fluorescence micrographs from pancreatic tissue. Computerized Medical Imaging and Graphics. 2010;34(6):446-452.PUB | DOI | WoS | PubMed | Europe PMC
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929311Gölzhäuser A, Nattkemper TW, Niehaus K, Pühler A, Sauer M. BioImaging: Contributions from biology, physics and informatics. Journal of Biotechnology. 2010;149(4):227-228.PUB | DOI | WoS | PubMed | Europe PMC
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929335Herold J, Schubert W, Nattkemper TW. Automated detection and quantification of fluorescently labeled synapses in murine brain tissue sections for high throughput applications. JOURNAL OF BIOTECHNOLOGY. 2010;149(4):299-309.PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018427Qureshi H, Rajpoot N, Nattkemper TW, Hans V. A Robust Adaptive Wavelet-based Method for Classification of Meningioma Histology Images. In: MICCAI«2009 Workshop on Optical Tissue Image Analysis in Microscopy, Histology, and Endoscopy. 2009.PUB
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635314Diaz NN, Krause L, Goesmann A, Niehaus K, Nattkemper TW. TACOA - Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach. BMC Bioinformatics. 2009;10(1):56.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589531Albaum S, Neuweger H, Fraenzel B, et al. Qupe-a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments. Bioinformatics. 2009;25(23):3128-3134.PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1591448Saalbach A, Lange O, Nattkemper TW, Meyer-Baese A. On the application of (topographic) independent and tree-dependent component analysis for the examination of DCE-MRI data. In: Biomedical Signal Processing and Control. BIOMEDICAL SIGNAL PROCESSING AND CONTROL. Vol 4. ELSEVIER SCI LTD; 2009: 247-253.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636280Timm W, Scherbart A, Boecker S, Kohlbacher O, Nattkemper TW. Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics. BMC Bioinformatics. 2008;9(1):443.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585611Wei N, Flaschel E, Friehs K, Nattkemper TW. A machine vision system for automated non-invasive assessment of cell viability via dark field microscopy, wavelet feature selection and classification. BMC Bioinformatics. 2008;9(1):449.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587052Martin C, Diaz NN, Ontrup J, Nattkemper TW. Hyperbolic SOM-based clustering of DNA fragment features for taxonomic visualization and classification. Bioinformatics. 2008;24(14):1568-1574.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588286Twellmann T, Meyer-Baese A, Lange O, Foo S, Nattkemper TW. Model-free visualization of suspicious lesions in breast MRI based on supervised and unsupervised learning. ENGINEERING APPLICATIONS OF ARTIFICIAL INTELLIGENCE. 2008;21(2):129-140.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018409Martin C, Nattkemper TW. A Tree Index to Support Clustering Based Exploratory Data Analysis. In: Bioinformatics Research and Development : Second International Conference, BIRD 2008 Vienna, Austria, July 7-9, 2008 Proceedings. Communications in Computer and Information Science. Vol 13. Berlin, Heidelberg: Springer; 2008: 1-15.PUB | DOI
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018381Albaum S, Neuweger H, Lange S, et al. ProSE - "Software as a Service" for Quantitative Proteomics (Poster abstract). In: HUPO 7th Annual World Congress. 2008.PUB
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018398Herold J, Friedenberger M, Bode M, Rajpoot N, Schubert W, Nattkemper TW. Flexible Synapse Detection in Fluorescence Micrographs by Modeling Human Expert Grading. In: Proc. of 2008 IEEE International Symposium on Biomedical Imaging. 2008.PUB | DOI
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630738Pobigaylo N, Szymczak S, Nattkemper TW, Becker A. Identification of genes relevant to symbiosis and competitiveness in Sinorhizobium meliloti using signature-tagged mutants. MOLECULAR PLANT-MICROBE INTERACTIONS. 2008;21(2):219-231.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018412Martin C, Díaz Solórzano NN, Ontrup J, Nattkemper TW. Genome feature exploration using hyperbolic Self-Organizing Maps. In: Proceedings of the 6th International Workshop on Self-Organizing Maps (WSOM 2007). Bielefeld: Bielefeld University; 2007.PUB | PDF | DOI
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2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714045Scherbart A, Timm W, Böcker S, Nattkemper TW. SOM-based Peptide Prototyping for Mass Spectrometry Peak Intensity Prediction. In: Proceedings of the 6th Workshop on Self-Organizing Maps (WSOM 07). Bielefeld: Bielefeld University; 2007.PUB | PDF | DOI
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2007 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2714002Lessmann B, Wang Y, Bergmann M, Kämpfe T, Nattkemper TW. Use of automated image analysis to detect changes in megafaunal densities at HAUSGARTEN (79°N west off Svalbard) between 2002 and 2004. Presented at the EMBS - 42nd European Marine Biology Symposium, Kiel, Germany.PUB
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2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2714021Nattkemper TW, Degenhard A, Twellmann T. Breast Tumor Classification and Visualization with Machine-Learning Approaches. In: Hayat MA, ed. Cancer Imaging - Lung and breast carcinomas. Vol 1. Amsterdam : Academic Press; 2007: 309-321.PUB
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2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2714040Scherbart A, Timm W, Boecker S, Nattkemper TW. Neural Network Approach for Mass Spectrometry Prediction by Peptide Prototyping. In: Sá de JM, ed. Artificial Neural Networks – ICANN 2007 - 17th International Conference, Porto, Portugal, September 9-13, 2007, Proceedings, Part II. Lecture Notes in Computer Science. Vol 4669. Berlin: Springer; 2007: 90-99.PUB | DOI
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714032Lessmann B, Nattkemper TW, Kessar P, et al. Multiscale Analysis of MR Mammography Data. Zeitschrift für Medizinische Physik (german journal of medical physics). 2007;17(3):166-171.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595739Wei N, You J, Friehs K, Flaschel E, Nattkemper TW. In situ dark field microscopy for on-line monitoring of yeast cultures. BIOTECHNOLOGY LETTERS. 2007;29(3):373-378.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593120Wei N, You J, Friehs K, Flaschel E, Nattkemper TW. An in situ probe for on-line monitoring of cell density and viability on the basis of dark field microscopy in conjunction with image processing and supervised machine learning. Biotechnology and Bioengineering. 2007;97(6):1489-1500.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630749Lessmann B, Nattkemper TW, Hans VH, Degenhard A. A method for linking computed image features to histological semantics in neuropathology. Journal of Biomedical Informatics. 2007;40(6):631-641.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2018416Nattkemper TW, Degenhard A, Twellmann T. Breas. In: Hayat MA, ed. Cancer Imaging - Lung and breast carcinomas. Vol 1. Academic Press; 2007: 309-324.PUB
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714075Deters grosse H, Timm W, Nattkemper TW. REEFSOM - A Metaphoric Data Display for Exploratory Data Mining : journal of new media in neural and cognitive science and education. Brains, Minds and Media. 2006;2(bmm305).PUB | Download (ext.)
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374232Varini C, Lessmann B, Degenhard A, Hans VH, Nattkemper TW. Visual Exploration of Pathology Images by a Discrete Wavelet Transform Preprocessed Locally Linear Embedding. In: Handels H, Ehrhardt J, Horsch A, Meinzer H-P, Tolxdorff T, Gesellschaft für Informatik, eds. Bildverarbeitung für die Medizin. Informatik aktuell. Berlin : Springer; 2006: 66-70.PUB | Download (ext.)
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714148Twellmann T, Lange O, Nattkemper TW, Meyer A. Visualizations of Suspicious Lesions in Breast MRI Based on Intelligent Neural Systems. In: Intelligent Computing: Theory and Applications IV. Proceedings of SPIE. Vol 6229. San Diego, CA: SPIE; 2006.PUB | DOI
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374254Lessmann B, Nattkemper TW, Huth J, et al. Content Based Image Retrieval for Dynamic Time Series Data. In: Proceedings of BVM. 2006: 61-65.PUB
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374494Timm W, Böcker S, Twellmann T, Nattkemper TW. Peak intensity prediction for pmf mass spectra using support vector regression. In: Proc. of the 7th International FLINS Conference on Applied Artificial Intelligence. WORLD SCIENTIFIC; 2006: 565-572.PUB | DOI
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714060Lessmann B, Hans V, Degenhard A, Nattkemper TW. Feature space exploration of pathology images using Content-Based Database Visualization. In: Medical Imaging 2006: Image Processing. Proceedings of SPIE. Vol 6144. San Diego, CA: SPIE; 2006.PUB | DOI
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600329Miksch G, Bettenworth F, Friehs K, Flaschel E, Saalbach A, Nattkemper TW. A rapid reporter system using GFP as a reporter protein for identification and screening of synthetic stationary-phase promoters in Escherichia coli. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY. 2006;70(2):229-236.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1597259Martin C, Deters H grosse, Nattkemper TW. Fusing biomedical multi-modal data for exploratory data analysis. In: Kollias S, ed. ARTIFICIAL NEURAL NETWORKS - ICANN 2006, PT 2. Vol 4132. Berlin, Heidelberg: SPRINGER-VERLAG BERLIN; 2006: 798-807.PUB | DOI | WoS
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598838Pobigaylo N, Wetter D, Szymczak S, et al. Construction of a large signature-tagged mini-Tn5 transposon library and its application to mutagenesis of Sinorhizobium meliloti. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 2006;72(6):4329-4337.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603560Nattkemper TW, Arnrich B, Lichte O, et al. Evaluation of radiological features for breast tumour classification in clinical screening with machine learning methods. ARTIFICIAL INTELLIGENCE IN MEDICINE. 2005;34(2):129-139.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714153Lessmann B, Nattkemper TW, Degenhard A, et al. Clustering approach for wavelet transformed MR image data. In: Proceedings of the 14th International Conference of Medical Physics. 2005: 1412.PUB
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714331Saalbach A, Twellmann T, Nattkemper TW. Spectral Clustering for Data Categorization based on Self-Organizing Maps. In: Nasser M. N, ed. Applications of Neural Networks and Machine Learning in Image Processing IX. Vol 5673. San Jose, CA; 2005: 12-18.PUB
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2005 | Monographie | PUB-ID: 2714309Bettenworth F, Miksch G, Fries K, et al. An Online Monitoring System for the Screening of Stationary-Phase Promoters in E. Coli using GFP as a Reporter Protein.; 2005.PUB
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374666Twellmann T, Lichte O, Saalbach A, Wismüller A, Nattkemper TW. An Adaptive Colour Scale for Comparison of Pseudo Colouring Techniques for DCE-MRI Data. Presented at the Workshop für Bildverarbeiteung für die Medzin.PUB
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374546Saalbach A, Twellmann T, Nattkemper TW, Wismüller A, Ontrup J, Ritter H. A hyperbolic topographic mapping for proximity data. In: Proc. of the IASTED International Conference of Artificial Intelligence and Applications. Vol 2005. 2005: 106-111.PUB
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714263Twellmann T, Lichte O, Nattkemper TW. An Adaptive Tissue Characterisation Network for Model-Free Visualisation of Dynamic Contrast-Enhanced Magnetic Resonance Image Data. IEEE Transactions on Medical Imaging. 2005;24(10):1256-1266.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714340Nattkemper TW, Wismüller A. Tumour feature analysis with unsupervised machine learning. Medical Image Analysis. 2005;9(4):344-351.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603030Nattkemper TW, Wismuller A. Tumor feature visualization with unsupervised learning. MEDICAL IMAGE ANALYSIS. 2005;9(4):344-351.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946602Wei N, Flaschel E, Saalbach A, Twellmann T, Nattkemper TW. Reagent-free automatic cell viability determination using neural networks based machine vision and dark-field microscopy in Saccharomyces cerevisiae. Conf Proc IEEE Eng Med Biol Soc. 2005;6:6305-6308.PUB | DOI | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602344Prank K, Schulze E, Eckert O, et al. Machine learning approaches for phenotype-genotype mapping: predicting heterozygous mutations in the CYP21B gene from steroid profiles. EUROPEAN JOURNAL OF ENDOCRINOLOGY. 2005;153(2):301-305.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601519Varini C, Degenhard A, Nattkemper TW. ISOLLE: Locally linear embedding with geodesic distance. In: Jorge A, ed. KNOWLEDGE DISCOVERY IN DATABASES: PKDD 2005. Lecture notes in computer science ; 3721 : Lecture notes in artificial intelligence. Vol 3721. Berlin, Heidelberg: SPRINGER-VERLAG BERLIN; 2005: 331-342.PUB | DOI | WoS
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601848Miksch G, Bettenworth F, Friehs K, et al. Libraries of synthetic stationary-phase and stress promoters as a tool for fine-tuning of expression of recombinant proteins in Escherichia coli. In: Journal of Biotechnology. JOURNAL OF BIOTECHNOLOGY. Vol 120. ELSEVIER SCIENCE BV; 2005: 25-37.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601906Lessmann B, Degenhard A, Kessar P, et al. SOM-based wavelet filtering for the exploration of medical images. In: Duch W, ed. ARTIFICIAL NEURAL NETWORKS: BIOLOGICAL INSPIRATIONS - ICANN 2005, PT 1, PROCEEDINGS. Lecture notes in computer science. Vol 3696. Berlin, Heidelberg: SPRINGER-VERLAG BERLIN; 2005: 671-676.PUB | DOI | WoS
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602177Twellmann T, Lichte O, Nattkemper TW. An adaptive tissue characterization network for model-free visualization of dynamic contrast-enhanced magnetic resonance image data. IEEE TRANSACTIONS ON MEDICAL IMAGING. 2005;24(10):1256-1266.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946892Nattkemper TW. Automatic segmentation of digital micrographs: a survey. Stud Health Technol Inform. 2004;107(Pt 2):847-851.PUB | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946838Twellmann T, Saalbach A, Müller C, Nattkemper TW, Wismuller A. Detection of suspicious lesions in dynamic contrast enhanced MRI data. The 26th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. 2004;1:454-457.PUB | PubMed | Europe PMC
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2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714397Kämpfe T, Nattkemper TW, Ritter H. AQUISAR: Image Retrieval in Underwater Webcam Images. In: WIAMIS 2004 : 5th International Workshop on Image Analysis for Multimedia Interactive Services. Lisboa, Portugal; 2004.PUB
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2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714346Lessmann B, Twellmann T, Degenhard A, Nattkemper TW, Leach MO. Wavelet features for improved tumour detection in DCE-MRI. In: Rueckert D, Hajnal J, Yang G-Z, eds. Proceedings of Medical Image Understanding and Analysis (MIUA). London, UK: BMVA; 2004: 93-96.PUB
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2714465Nattkemper TW. Multivariate image analysis in biomedicine: a methodological review. Journal of Biomedical Informatics. 2004;37(5):380-391.PUB
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2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714382Saalbach A, Twellmann T, Nattkemper TW, White MJ, Khazen M, Leach MO. Visualization of Multivariate Image Data using Image Fusion and Perceptually Optimized Color Scales based on sRGB. In: Robert L. Galloway J, ed. Medical Imaging 2004: Visualization, Image-Guided Procedures, and Display. Proceedings of SPIE. Vol 5367. San Diego, CA: SPIE; 2004.PUB | DOI
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2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2375262Varini C, Nattkemper TW, Degenhard A, Wismüller A. Visualisation of Breast Tumour DCE-MRI Data using LLE. In: Proc. Medical Image Understanding and Analysis (MIUA). BMVA; 2004: 97-100.PUB
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606041Nattkemper TW. Multivariate image analysis in biomedicine. JOURNAL OF BIOMEDICAL INFORMATICS. 2004;37(5):380-391.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2017545Nattkemper TW, Hermann T, Schubert W, Ritter H. Look & Listen: Sonification and Visualization of Multiparameter Micrographs. In: Engineering in Medicine and Biology Society. Proceedings of the 25th Annual International Conference of the IEEE. Vol 2. Cancun, Mexico: IEEE; 2003: 1311-1314.PUB | PDF
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2003 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714487Twellmann T, Saalbach A, Nattkemper TW, Ritter H. Artificial Neural Networks Machine Learning Approaches for Multivariate Image Analysis. In: Proceedings Linking mathematical and biological models in cancer research. Magdeburg; 2003.PUB
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2003 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714496Ontrup J, Nattkemper TW, Gerstung O, Ritter H. A MeSH Term based Distance Measure for Document Retrieval and Labeling Assistance. In: Proc. of EMBC2003. Cancun, Mexico: IEEE EMBS; 2003.PUB
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612741Nattkemper TW, Twellmann T, Ritter H, Schubert W. Human vs. machine: evaluation of fluorescence micrographs. Computers in Biology and Medicine. 2003;33(1):31-43.PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1886441Schubert W, Friedenberger M, Haars R, et al. Automatic recognition of muscle invasive T-lymphocytes expressing dipeptidyl-peptidase IV (CD26) and analysis of the associated cell surface phenotypes. Journal of Theoretical Medicine. 2002;4(1):67-74.PUB | DOI
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2001 | Datenpublikation | PUB-ID: 2763993Hermann T, Nattkemper TW. Multi-Channel Image Data Analysis using Sonification. Bielefeld University; 2001.PUB | Dateien verfügbar | DOI
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2001 | Bielefelder E-Dissertation | PUB-ID: 2304068Nattkemper TW. A neural network-based system for high throughput fluorescence micrograph evaluation. Bielefeld (Germany): Bielefeld University; 2001.PUB | Dateien verfügbar
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2001 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2375220Twellmann T, Nattkemper TW, Schubert W, Ritter H. Cell Detection in Micrographs of Tissue Sections Using Support Vector Machines. In: Proc. of. ICANN 2001 Workshop on Kernel and Subspace Methods for Computer Vision. 2001.PUB
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1617028Nattkemper TW, Ritter H, Schubert W. A neural classifier enabling high-throughput topological analysis of lymphocytes in tissue sections. IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE. 2001;5(2):138-149.PUB | DOI | WoS | PubMed | Europe PMC
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2001 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1886493Kämpfe T, Nattkemper TW, Ritter H. Combining Independent Component Analysis and Self-organizing Maps for Cell Image Classification. In: Radig B, Florczyk S, eds. Pattern Recognition. LNCS. Vol 2191. Berlin: Springer; 2001: 262-268.PUB
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2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2017374Hermann T, Nattkemper TW, Schubert W, Ritter H. Sonification of Multi-Channel Image Data. In: Falavar V, ed. Proc. of the Mathematical and Engineering Techniques in Medical and Biological Sciences. Las Vegas: CSREA Press; 2000: 745-750.PUB | PDF
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2000 | Datenpublikation | PUB-ID: 2701103Hermann T, Nattkemper TW, Ritter H. Supplementary Material for "Sonification of Multi-Channel Image Data". Bielefeld University; 2000.PUB | Dateien verfügbar | DOI
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2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2375211Nattkemper TW, Wersing H, Schubert W, Ritter H. A Neural Network Architecture for Automatic Segmentation of Fluorescence Micrographs. In: Verleysen M, ed. Proc. of the 8th Europ. Symp. on Art. Neur. Netw. (ESANN). 2000.PUB
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2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374799Nattkemper TW, Wersing H, Schubert W, Ritter H. Fluorescence Micrograph Segmentation by Gestalt-Based Feature Binding. In: Proc. of the Int. Joint Conf. on Neur. Netw. (IJCNN). Vol 1. Como, Italy; 2000: 248-254.PUB
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2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2714744Nattkemper TW, Wersing H, Schubert W, Ritter H. Automatic Evaluation of Multi-Parameter Fluorescence Micrographs with a Neural Network Architecture. In: Proceedings of the International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, METMBS '00. Vol 2. Las Vegas, USA; 2000: 739-744.PUB
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1999 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374786Nattkemper TW, Ritter H, Schubert W. Extracting Patterns of Lymphocyte Fluorescence from Digital Microscope Images. In: Intelligent Data Analysis in Medicine and Pharmacology (IDAMAP 99), Workshop Notes. AMIA 1999, Washington DC; 1999: 79-88.PUB
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1998 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2714985Heidemann G, Nattkemper TW, Ritter H. Farbe und Symmetrie für die datengetriebene Generierung prägnanter Fokuspunkte. In: Rehrmann V, ed. 4. Workshop Farbbildverarbeitung. Koblenzer Schriften zur Informatik. Vol 9. Koblenz: Fölbach; 1998: 65-71.PUB
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