20 Publikationen

Alle markieren

[20]
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591539 OA
Alves jun., Leonardo, Niemeier, Sandra, Hauenschild, Arne, Rehmsmeier, Marc, and Merkle, Thomas. 2009. “Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana”. Nucleic Acids Research 37 (12): 4010-4021.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[19]
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634374
Homann, Robert, Fleer, David, Giegerich, Robert, and Rehmsmeier, Marc. 2009. “mkESA: enhanced suffix array construction tool”. Bioinformatics 25 (8): 1084-1085.
PUB | DOI | WoS | PubMed | Europe PMC
 
[18]
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1633720
Siegel, Gabriele, Obernosterer, Gregor, Fiore, Roberto, Oehmen, Martin, Bicker, Silvia, Christensen, Mette, Khudayberdiev, Sharof, et al. 2009. “A functional screen implicates microRNA-138-dependent regulation of the depalmitoylation enzyme APT1 in dendritic spine morphogenesis”. NATURE CELL BIOLOGY 11 (6): 705-716.
PUB | DOI | WoS | PubMed | Europe PMC
 
[17]
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2383467
Krüger, Jan, and Rehmsmeier, Marc. 2006. “RNAhybrid: microRNA target prediction easy, fast, and flexible”. Nucleic Acids Research 34 (Web Server): W451-W454.
PUB | DOI | WoS | PubMed | Europe PMC
 
[16]
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773878 OA
Krüger, Jan, and Rehmsmeier, Marc. 2006. “RNAhybrid: microRNA target prediction easy, fast and flexible”. Nucleic Acids Research 34 (Web Server): W451-W454.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[15]
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600421
Steffen, Peter, Voss, Björn, Rehmsmeier, Marc, Reeder, Jens, and Giegerich, Robert. 2006. “RNAshapes: an integrated RNA analysis package based on abstract shapes”. Bioinformatics 22 (4): 500-503.
PUB | DOI | WoS | PubMed | Europe PMC
 
[14]
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773637 OA
Voß, Björn, Giegerich, Robert, and Rehmsmeier, Marc. 2006. “Complete probabilistic analysis of RNA shapes”. BMC Biology 4 (1): 5.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[13]
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773916 OA
Fiedler, Thomas, and Rehmsmeier, Marc. 2006. “jPREdictor: a versatile tool for the prediction of cis-regulatory elements”. Nucleic Acids Research 34 (Web Server): W546-W550.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[12]
2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1598807
Reeder, Jens, Höchsmann, Matthias, Rehmsmeier, Marc, Voss, Björn, and Giegerich, Robert. 2006. “Beyond Mfold: recent advances in RNA bioinformatics”, JOURNAL OF BIOTECHNOLOGY, 124 (1): 41-55.
PUB | DOI | WoS | PubMed | Europe PMC
 
[11]
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606383
Alam, I, Dress, Andreas, Rehmsmeier, Marc, and Fuellen, Georg. 2004. “Comparative homology agreement search: An effective combination of homology-search methods”. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101 (38): 13814-13819.
PUB | DOI | WoS | PubMed | Europe PMC
 
[10]
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606377
Rehmsmeier, Marc, Steffen, Peter, Höchsmann, Matthias, and Giegerich, Robert. 2004. “Fast and effective prediction of microRNA/target duplexes”. RNA-A PUBLICATION OF THE RNA SOCIETY 10 (10): 1507-1517.
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606393 OA
Giegerich, Robert, Voss, Björn, and Rehmsmeier, Marc. 2004. “Abstract shapes of RNA”. Nucleic Acids Research 32 (16): 4843-4851.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[8]
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2379512
Ringrose, Leonie, Rehmsmeier, Marc, Dura, Jean-Maurice, and Paro, Renato. 2003. “Genome Wide Prediction of Polycomb/Trithorax Response Elements in Drosophila melanogaster”. Developmental Cell 5: 759-771.
PUB
 
[7]
2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773578 OA
Spang, Rainer, Rehmsmeier, Marc, and Stoye, Jens. 2002. “A novel approach to remote homology detection: jumping alignments”. Journal of Computational Biology 9 (5): 747-760.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[6]
2001 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2378553
Müller, T., Rahmann, S., and Rehmsmeier, Marc. 2001. “Non-symmetric Score Matrices and the Detection of Homologous Transmembrane Proteins”, Bioinformatics, 17 (Suppl. 1): S182-189.
PUB | DOI
 
[5]
2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2379442
Rehmsmeier, Marc, and Vingron, Martin Vingron. 2001. “Phylogenetic Information Improves Homology Detection”. Proteins: Structure, Function, and Genetics 45: 360-371.
PUB
 
[4]
1999 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2379439
Rehmsmeier, Marc, and Vingron, Martin. 1999. “Phylogeny meets sequence search”. In Proceedings of the German Conference on Bioinformatics GCB, 66-72.
PUB
 
[3]
1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2379431
Krause, Antje, Nicodeme, Pierre, Bornberg-Bauer, Erich Bornberg-Bauer, Rehmsmeier, Marc, and Vingron, Martin. 1999. “WWW-Access to the SYSTERS Protein Sequence Cluster Set”. Bioinformatics 15: 262-263.
PUB
 
[2]
1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1947682
Giegerich, Robert, Haase, D., and Rehmsmeier, Marc. 1999. “Prediction and visualization of structural switches in RNA”. Pac Symp Biocomput.
PUB | PubMed | Europe PMC
 
[1]
1998 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2378670
Krause, Antje, Nicodeme, Pierre, Rehmsmeier, Marc, and Vingron, Martin. 1998. “Automatic clustering of large sequence databases”. In Proceedings of the German Conference on Bioinformatics GCB.
PUB
 

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20 Publikationen

Alle markieren

[20]
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591539 OA
Alves jun., Leonardo, Niemeier, Sandra, Hauenschild, Arne, Rehmsmeier, Marc, and Merkle, Thomas. 2009. “Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana”. Nucleic Acids Research 37 (12): 4010-4021.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[19]
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634374
Homann, Robert, Fleer, David, Giegerich, Robert, and Rehmsmeier, Marc. 2009. “mkESA: enhanced suffix array construction tool”. Bioinformatics 25 (8): 1084-1085.
PUB | DOI | WoS | PubMed | Europe PMC
 
[18]
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1633720
Siegel, Gabriele, Obernosterer, Gregor, Fiore, Roberto, Oehmen, Martin, Bicker, Silvia, Christensen, Mette, Khudayberdiev, Sharof, et al. 2009. “A functional screen implicates microRNA-138-dependent regulation of the depalmitoylation enzyme APT1 in dendritic spine morphogenesis”. NATURE CELL BIOLOGY 11 (6): 705-716.
PUB | DOI | WoS | PubMed | Europe PMC
 
[17]
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2383467
Krüger, Jan, and Rehmsmeier, Marc. 2006. “RNAhybrid: microRNA target prediction easy, fast, and flexible”. Nucleic Acids Research 34 (Web Server): W451-W454.
PUB | DOI | WoS | PubMed | Europe PMC
 
[16]
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773878 OA
Krüger, Jan, and Rehmsmeier, Marc. 2006. “RNAhybrid: microRNA target prediction easy, fast and flexible”. Nucleic Acids Research 34 (Web Server): W451-W454.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[15]
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600421
Steffen, Peter, Voss, Björn, Rehmsmeier, Marc, Reeder, Jens, and Giegerich, Robert. 2006. “RNAshapes: an integrated RNA analysis package based on abstract shapes”. Bioinformatics 22 (4): 500-503.
PUB | DOI | WoS | PubMed | Europe PMC
 
[14]
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773637 OA
Voß, Björn, Giegerich, Robert, and Rehmsmeier, Marc. 2006. “Complete probabilistic analysis of RNA shapes”. BMC Biology 4 (1): 5.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[13]
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773916 OA
Fiedler, Thomas, and Rehmsmeier, Marc. 2006. “jPREdictor: a versatile tool for the prediction of cis-regulatory elements”. Nucleic Acids Research 34 (Web Server): W546-W550.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[12]
2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1598807
Reeder, Jens, Höchsmann, Matthias, Rehmsmeier, Marc, Voss, Björn, and Giegerich, Robert. 2006. “Beyond Mfold: recent advances in RNA bioinformatics”, JOURNAL OF BIOTECHNOLOGY, 124 (1): 41-55.
PUB | DOI | WoS | PubMed | Europe PMC
 
[11]
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606383
Alam, I, Dress, Andreas, Rehmsmeier, Marc, and Fuellen, Georg. 2004. “Comparative homology agreement search: An effective combination of homology-search methods”. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101 (38): 13814-13819.
PUB | DOI | WoS | PubMed | Europe PMC
 
[10]
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606377
Rehmsmeier, Marc, Steffen, Peter, Höchsmann, Matthias, and Giegerich, Robert. 2004. “Fast and effective prediction of microRNA/target duplexes”. RNA-A PUBLICATION OF THE RNA SOCIETY 10 (10): 1507-1517.
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606393 OA
Giegerich, Robert, Voss, Björn, and Rehmsmeier, Marc. 2004. “Abstract shapes of RNA”. Nucleic Acids Research 32 (16): 4843-4851.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[8]
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2379512
Ringrose, Leonie, Rehmsmeier, Marc, Dura, Jean-Maurice, and Paro, Renato. 2003. “Genome Wide Prediction of Polycomb/Trithorax Response Elements in Drosophila melanogaster”. Developmental Cell 5: 759-771.
PUB
 
[7]
2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773578 OA
Spang, Rainer, Rehmsmeier, Marc, and Stoye, Jens. 2002. “A novel approach to remote homology detection: jumping alignments”. Journal of Computational Biology 9 (5): 747-760.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[6]
2001 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2378553
Müller, T., Rahmann, S., and Rehmsmeier, Marc. 2001. “Non-symmetric Score Matrices and the Detection of Homologous Transmembrane Proteins”, Bioinformatics, 17 (Suppl. 1): S182-189.
PUB | DOI
 
[5]
2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2379442
Rehmsmeier, Marc, and Vingron, Martin Vingron. 2001. “Phylogenetic Information Improves Homology Detection”. Proteins: Structure, Function, and Genetics 45: 360-371.
PUB
 
[4]
1999 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2379439
Rehmsmeier, Marc, and Vingron, Martin. 1999. “Phylogeny meets sequence search”. In Proceedings of the German Conference on Bioinformatics GCB, 66-72.
PUB
 
[3]
1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2379431
Krause, Antje, Nicodeme, Pierre, Bornberg-Bauer, Erich Bornberg-Bauer, Rehmsmeier, Marc, and Vingron, Martin. 1999. “WWW-Access to the SYSTERS Protein Sequence Cluster Set”. Bioinformatics 15: 262-263.
PUB
 
[2]
1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1947682
Giegerich, Robert, Haase, D., and Rehmsmeier, Marc. 1999. “Prediction and visualization of structural switches in RNA”. Pac Symp Biocomput.
PUB | PubMed | Europe PMC
 
[1]
1998 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2378670
Krause, Antje, Nicodeme, Pierre, Rehmsmeier, Marc, and Vingron, Martin. 1998. “Automatic clustering of large sequence databases”. In Proceedings of the German Conference on Bioinformatics GCB.
PUB
 

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