Rafael Szczepanowski
PEVZ-ID
48 Publikationen
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2664976Complete Genome Sequence of the Actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycinPUB | DOI | WoS | PubMed | Europe PMC
Rückert, Christian, Complete Genome Sequence of the Actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycin. Journal of biotechnology 178 (). , 2014 -
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2648007Genome sequence of the squalene-degrading bacterium Corynebacterium terpenotabidum type strain Y-11T (= DSM 44721T)PUB | DOI | WoS | PubMed | Europe PMC
Rückert, Christian, Genome sequence of the squalene-degrading bacterium Corynebacterium terpenotabidum type strain Y-11T (= DSM 44721T). Standards in Genomic Sciences 9 (3). , 2013 -
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529309Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (Brassica napus L. var oleifera) Evaluated through Next-Generation SequencingPUB | DOI | WoS | PubMed | Europe PMC
Bolzan de Campos, Samanta, Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (Brassica napus L. var oleifera) Evaluated through Next-Generation Sequencing. Microbial Ecology 65 (3). , 2013 -
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2632946Complete genome sequence of Pseudomonas sp. strain VLB120 a solvent tolerant, styrene degrading bacterium, isolated from forest soilPUB | DOI | WoS | PubMed | Europe PMC
Köhler, Kirsten A. K., Complete genome sequence of Pseudomonas sp. strain VLB120 a solvent tolerant, styrene degrading bacterium, isolated from forest soil. Journal of Biotechnology 168 (4). , 2013 -
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548286Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344PUB | DOI | WoS | PubMed | Europe PMC
Luque-Almagro, Víctor M, Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344. Environmental Microbiology 15 (1). , 2013 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517230Bacterial Community Shift in Treated Periodontitis Patients Revealed by Ion Torrent 16S rRNA Gene Amplicon SequencingPUB | DOI | WoS | PubMed | Europe PMC
Jünemann, Sebastian, Bacterial Community Shift in Treated Periodontitis Patients Revealed by Ion Torrent 16S rRNA Gene Amplicon Sequencing. PLoS ONE 7 (8). , 2012 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2486060The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Schwientek, Patrick, The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110. BMC Genomics 13 (1). , 2012 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2551038Genome sequence of the halotolerant bacterium Corynebacterium halotolerans type strain YIM 70093T (= DSM 44683T)PUB | DOI | WoS | PubMed | Europe PMC
Rückert, Christian, Genome sequence of the halotolerant bacterium Corynebacterium halotolerans type strain YIM 70093T (= DSM 44683T). Standards in Genomic Sciences 7 (2). , 2012 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2484618Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencingPUB | DOI | WoS | PubMed | Europe PMC
Zakrzewski, Martha, Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing. Journal of Biotechnology 158 (4). , 2012 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2530221The genome sequence of the bacterium Streptomyces davawensis JCM 4913 and heterologous production of the unique antibiotic roseoflavinPUB | DOI | WoS | PubMed | Europe PMC
Jankowitsch, Frank, The genome sequence of the bacterium Streptomyces davawensis JCM 4913 and heterologous production of the unique antibiotic roseoflavin. Journal of bacteriology 194 (24). , 2012 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2472279The complete genome sequences of four new IncN plasmids from wastewater treatment plant effluent provide new insights into IncN plasmid diversity and evolutionPUB | DOI | WoS | PubMed | Europe PMC | GenBank
Eikmeyer, Felix Gregor, The complete genome sequences of four new IncN plasmids from wastewater treatment plant effluent provide new insights into IncN plasmid diversity and evolution. Plasmid 68 (1). , 2012 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490535Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silagePUB | DOI | WoS | PubMed | Europe PMC
Heinl, Stefan, Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage. Journal of Biotechnology 161 (2). , 2012 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471681Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencingPUB | DOI | WoS | PubMed | Europe PMC
Rademacher, Antje, Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing. FEMS Microbiology Ecology 79 (3). , 2012 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2474305Carbapenem-Hydrolyzing GES-5-Encoding Gene on Different Plasmid Types Recovered from a Bacterial Community in a Sewage Treatment PlantPUB | DOI | WoS | PubMed | Europe PMC
Girlich, Delphine, Carbapenem-Hydrolyzing GES-5-Encoding Gene on Different Plasmid Types Recovered from a Bacterial Community in a Sewage Treatment Plant. Applied and Environmental Microbiology 78 (4). , 2012 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2544774Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10PUB | DOI | WoS | PubMed | Europe PMC
Schneider, Jessica, Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10. Eukaryotic Cell 11 (12). , 2012 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526269Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced PseudonocardiaceaePUB | PDF | DOI | WoS | PubMed | Europe PMC
Strobel, Tina, Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae. BMC Genomics 13 (1). , 2012 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526298Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge DigesterPUB | DOI | WoS | PubMed | Europe PMC
Maus, Irena, Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester. Journal of Bacteriology 194 (19). , 2012 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490286Ion Torrent PGM sequencing for genomic typing of Neisseria meningitidis for rapid determination of multiple layers of typing informationPUB | DOI | WoS | PubMed | Europe PMC
Vogel, Ulrich, Ion Torrent PGM sequencing for genomic typing of Neisseria meningitidis for rapid determination of multiple layers of typing information. Journal of clinical microbiology 50 (6). , 2012 -
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2453768Next-generation sequencing of the CHO cell transcriptomePUB | DOI
Becker, Jennifer, Next-generation sequencing of the CHO cell transcriptome. 5 (Suppl. 8). , 2011 -
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354746Sequencing of high G + C microbial genomes using the ultrafast pyrosequencing technologyPUB | DOI | WoS | PubMed | Europe PMC
Schwientek, Patrick, Sequencing of high G + C microbial genomes using the ultrafast pyrosequencing technology. Journal of Biotechnology 155 (1). , 2011 -
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354731Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmidPUB | DOI | WoS | PubMed | Europe PMC
Wibberg, Daniel, Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid. Journal of Biotechnology 155 (1). , 2011 -
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317371High-quality genome sequence of Pichia pastoris CBS7435PUB | DOI | WoS | PubMed | Europe PMC
Küberl, Andreas, High-quality genome sequence of Pichia pastoris CBS7435. Journal of Biotechnology 154 (4). , 2011 -
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326465First genomic analysis of the broad-host-range Rhizobium sp LPU83 strain, a member of the low-genetic diversity Oregon-like Rhizobium sp groupPUB | DOI | WoS | PubMed | Europe PMC
Torres Tejerizo, Gonzalo, First genomic analysis of the broad-host-range Rhizobium sp LPU83 strain, a member of the low-genetic diversity Oregon-like Rhizobium sp group. Journal of Biotechnology 155 (1). , 2011 -
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396576Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencingPUB | DOI | WoS | PubMed | Europe PMC
Becker, Jennifer, Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Journal of Biotechnology 156 (3). , 2011 -
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326518Sequencing and comparative analysis of IncP-1 alpha antibiotic resistance plasmids reveal a highly conserved backbone and differences within accessory regionsPUB | DOI | WoS | PubMed | Europe PMC
Szczepanowski, Rafael, Sequencing and comparative analysis of IncP-1 alpha antibiotic resistance plasmids reveal a highly conserved backbone and differences within accessory regions. Journal of Biotechnology 155 (1). , 2011 -
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2087955Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineeringPUB | DOI | WoS | PubMed | Europe PMC
Hackl, Matthias, Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering. Journal of Biotechnology 153 (1-2). , 2011 -
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785275Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortionPUB | PDF | DOI | WoS | PubMed | Europe PMC
Trost, Eva, Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion. BMC Genomics 11 (1). , 2010 -
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2486400Advanced Genomics and Transcriptomics of Industrial MicroorganismsPUB | DOI
Kalinowski, Jörn, Advanced Genomics and Transcriptomics of Industrial Microorganisms. Chemie Ingenieur Technik 82 (9). , 2010 -
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591546Detection of 140 clinically relevant antibiotic-resistance genes in the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to selected antibioticsPUB | DOI | WoS | PubMed | Europe PMC
Szczepanowski, Rafael, Detection of 140 clinically relevant antibiotic-resistance genes in the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to selected antibiotics. MICROBIOLOGY 155 (7). , 2009 -
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585980Genetic diversity and composition of a plasmid metagenome from a wastewater treatment plantPUB | DOI | WoS | PubMed | Europe PMC
Schlueter, Andreas, Genetic diversity and composition of a plasmid metagenome from a wastewater treatment plant. Journal of Biotechnology 136 (1-2). , 2008 -
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585969Insight into the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to antimicrobial drugs analysed by the 454-pyrosequencing technologyPUB | DOI | WoS | PubMed | Europe PMC
Szczepanowski, Rafael, Insight into the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to antimicrobial drugs analysed by the 454-pyrosequencing technology. JOURNAL OF BIOTECHNOLOGY 136 (1-2). , 2008 -
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586009Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactorPUB | DOI | WoS | PubMed | Europe PMC
Krause, Lutz, Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor. JOURNAL OF BIOTECHNOLOGY 136 (1-2). , 2008 -
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585987The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technologyPUB | DOI | WoS | PubMed | Europe PMC
Schlüter, Andreas, The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology. Journal of Biotechnology 136 (1-2). , 2008 -
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585939Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acidsPUB | DOI | WoS | PubMed | Europe PMC
Tauch, Andreas, Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids. Journal of Biotechnology 136 (1-2). , 2008 -
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595908Novel macrolide resistance module carried by the IncP-1 beta resistance plasmid pRSB111, isolated from a wastewater treatment plantPUB | DOI | WoS | PubMed | Europe PMC
Szczepanowski, Rafael, Novel macrolide resistance module carried by the IncP-1 beta resistance plasmid pRSB111, isolated from a wastewater treatment plant. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 51 (2). , 2007 -
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593538Genomics of IncP-1 antibiotic resistance plasmids isolated from wastewater treatment plants provides evidence for a widely accessible drug resistance gene poolPUB | DOI | WoS | PubMed | Europe PMC
Schlüter, Andreas, Genomics of IncP-1 antibiotic resistance plasmids isolated from wastewater treatment plants provides evidence for a widely accessible drug resistance gene pool. FEMS MICROBIOLOGY REVIEWS 31 (4). , 2007 -
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595014Erythromycin resistance-conferring plasmid pRSB105, isolated from a sewage treatment plant, harbors a new macrolide resistance determinant, an integron-containing Tn402-like element, and a large region of unknown functionPUB | DOI | WoS | PubMed | Europe PMC
Schlüter, Andreas, Erythromycin resistance-conferring plasmid pRSB105, isolated from a sewage treatment plant, harbors a new macrolide resistance determinant, an integron-containing Tn402-like element, and a large region of unknown function. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 73 (6). , 2007 -
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946125IncP-1-beta plasmid pGNB1 isolated from a bacterial community from a wastewater treatment plant mediates decolorization of triphenylmethane dyesPUB | DOI | WoS | PubMed | Europe PMC | GenBank
Schlüter, Andreas, IncP-1-beta plasmid pGNB1 isolated from a bacterial community from a wastewater treatment plant mediates decolorization of triphenylmethane dyes. Appl Environ Microbiol 73 (20). , 2007 -
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604328The 120 592 bp lncF plasmid pRSB107 isolated from a sewage-treatment plant encodes nine different anti biotic-resistance determinants, two iron-acquisition systems and other putative virulence-associated functionsPUB | DOI | WoS | PubMed | Europe PMC
Szczepanowski, Rafael, The 120 592 bp lncF plasmid pRSB107 isolated from a sewage-treatment plant encodes nine different anti biotic-resistance determinants, two iron-acquisition systems and other putative virulence-associated functions. MICROBIOLOGY-SGM 151 (4). , 2005 -
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1864013Genomics of resistance plasmids isolated from wastewater treatment plantsPUB
Tennstedt, T., Genomics of resistance plasmids isolated from wastewater treatment plants. Plasmid 53 (1). , 2005 -
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602311Plasmid pB8 is closely related to the prototype IncP-1 beta plasmid R751 but transfers poorly to Escherichia coli and carries a new transposon encoding a small multidrug resistance efflux proteinPUB | DOI | WoS | PubMed | Europe PMC
Schlüter, Andreas, Plasmid pB8 is closely related to the prototype IncP-1 beta plasmid R751 but transfers poorly to Escherichia coli and carries a new transposon encoding a small multidrug resistance efflux protein. PLASMID 54 (2). , 2005 -
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603956Sequence of the 68,869 bp IncP-1 alpha plasmid pTB11 from a waste-water treatment plant reveals a highly conserved backbone, a Tn402-like integron and other transposable elementsPUB | DOI | WoS | PubMed | Europe PMC
Tennstedt, T., Sequence of the 68,869 bp IncP-1 alpha plasmid pTB11 from a waste-water treatment plant reveals a highly conserved backbone, a Tn402-like integron and other transposable elements. PLASMID 53 (3). , 2005 -
2004 | Dissertation | PUB-ID: 2435352Sequenzerstellung, komparative Genomik und funktionelle Analysen von Antibiotika-Resistenzplasmiden aus Belebtschlammbakterien einer kommunalen AbwasserkläranlagePUB
Szczepanowski, Rafael, Sequenzerstellung, komparative Genomik und funktionelle Analysen von Antibiotika-Resistenzplasmiden aus Belebtschlammbakterien einer kommunalen Abwasserkläranlage. (). Bielefeld, 2004 -
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605656Antibiotic multiresistance plasmid pRSB101 isolated from a wastewater treatment plant is related to plasmids residing in phytopathogenic bacteria and carries eight different resistance determinants including a multidrug transport systemPUB | DOI | WoS | PubMed | Europe PMC | GenBank
Szczepanowski, Rafael, Antibiotic multiresistance plasmid pRSB101 isolated from a wastewater treatment plant is related to plasmids residing in phytopathogenic bacteria and carries eight different resistance determinants including a multidrug transport system. Microbiology 150 (11). , 2004 -
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605648The complete sequences of plasmids pB2 and pB3 provide evidence for a recent ancestor of the IncP-1 beta group without any accessory genesPUB | DOI | WoS | PubMed | Europe PMC
Heuer, H, The complete sequences of plasmids pB2 and pB3 provide evidence for a recent ancestor of the IncP-1 beta group without any accessory genes. Microbiology 150 (11). , 2004 -
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605701Different molecular rearrangements in the integron of the IncP-1 beta resistance plasmid pB10 isolated from a wastewater treatment plant result in elevated beta-lactam resistance levelsPUB | DOI | WoS | PubMed | Europe PMC
Krahn, Irene, Different molecular rearrangements in the integron of the IncP-1 beta resistance plasmid pB10 isolated from a wastewater treatment plant result in elevated beta-lactam resistance levels. ARCHIVES OF MICROBIOLOGY 182 (6). , 2004 -
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609647The 64 508 bp IncP-1 beta antibiotic multiresistance plasmid pB10 isolated from a waste-water treatment plant provides evidence for recombination between members of different branches of the IncP-1 beta groupPUB | DOI | WoS | PubMed | Europe PMC | GenBank
Schlüter, Andreas, The 64 508 bp IncP-1 beta antibiotic multiresistance plasmid pB10 isolated from a waste-water treatment plant provides evidence for recombination between members of different branches of the IncP-1 beta group. Microbiology 149 (). , 2003 -
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610484Occurrence of integron-associated resistance gene cassettes located on antibiotic resistance plasmids isolated from a wastewater treatment plantPUB | DOI | WoS | PubMed | Europe PMC
Tennstedt, T, Occurrence of integron-associated resistance gene cassettes located on antibiotic resistance plasmids isolated from a wastewater treatment plant. FEMS MICROBIOLOGY ECOLOGY 45 (3). , 2003