PUB - Publikationen an der Universität Bielefeld

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• [124]
  

  2024 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2988475

  Cieslak, C., Rückert-Reed, C., Hain, C., Busche, T., Kalinowski, J., Schaper-Gerhardt, K., Gutzmer, R., Stadler, R.: Nanopore sequencing for T-cell receptor repertoire analysis in patients with cutaneous T-cell lymphoma. Experimental Dermatology . 33, : P100 (2024).

  PUB | DOI | WoS
   
• [123]
  

  2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2987253

  Hose, L., Schürmann, M., Mennebröcker, I., Kim, R., Busche, T., Goon, P., Sudhoff, H.: Characterization of non-invasive oropharyngeal samples and nucleic acid isolation for molecular diagnostics. Scientific Reports. 14, : 4061 (2024).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [122]
  

  2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2986496

  Helm, T., Stausberg, T., Previati, M., Ernst, P., Klein, B., Busche, T., Kalinowski, J., Wibberg, D., Wiechert, W., Claerhout, L., Wierckx, N., Noack, S.: Itaconate Production from Crude Substrates with U. maydis: Scale-up of an Industrially Relevant Bioprocess. Microbial Cell Factories. 23, : 29 (2024).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [121]
  

  2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2986096

  Hamed, M.B., Busche, T., Simoens, K., Carpentier, S., Kormanec, J., Van Mellaert, L., Anné, J., Kalinowski, J., Bernaerts, K., Karamanou, S., Economou, A.: Enhanced protein secretion in reduced genome strains of Streptomyces lividans. Microbial Cell Factories . 23, : 13 (2024).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [120]
  

  2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2985596

  Lecaudey, L.A., Netzer, R., Wibberg, D., Busche, T., Bloecher, N.: Metatranscriptome analysis reveals the putative venom toxin repertoire of the biofouling hydroid Ectopleura larynx. Toxicon. 237, : 107556 (2024).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [119]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2985294

  Blifernez-Klassen, O., Hassa, J., Reinecke, D.L., Busche, T., Klassen, V., Kruse, O.: Microbial Diversity and Community Structure of Wastewater-Driven Microalgal Biofilms. Microorganisms. 11, : 2994 (2023).

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• [118]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979424

  Schmidt, P., Brandt, D., Busche, T., Kalinowski, J.: Characterization of Bacterial Transcriptional Regulatory Networks in Escherichia coli through Genome-Wide In Vitro Run-Off Transcription/RNA-seq (ROSE). Microorganisms. 11, : 1388 (2023).

  PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint
   
• [117]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2983332

  Grabner F., M., Grabner H., M., Schein, H., Weidenholzer, E., Busche, T., Rückert-Reed, C., Buchebner-Jance, M.: Lacticaseibacillus huelsenbergensis sp. nov., isolated from grass silage and corn silage. International Journal of Systematic and Evolutionary Microbiology. 73, (2023).

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• [116]
  

  2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2985583

  Breuer, J., Busche, T., Kalinowski, J., Nowrousian, M.: Histone binding of ASF1 is required for fruiting body development but not for genome stability in the filamentous fungus Sordaria macrospora. mBio. : e0289623 (2023).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [115]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2984921

  Van Loi, V., Busche, T., Kuropka, B., Müller, S., Methling, K., Lalk, M., Kalinowski, J., Antelmann, H.: Staphylococcus aureus adapts to the immunometabolite itaconic acid by inducing acid and oxidative stress responses including S-bacillithiolations and S-itaconations. Free Radical Biology and Medicine. 208, 859-876 (2023).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [114]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2984747

  Eckert, N., Rebets, Y., Horbal, L., Zapp, J., Herrmann, J., Busche, T., Müller, R., Kalinowski, J., Luzhetskyy, A.: Discovery and overproduction of novel highly bioactive pamamycins through transcriptional engineering of the biosynthetic gene cluster. Microbial Cell Factories . 22, : 233 (2023).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [113]
  

  2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2984306

  Loi, V.V., Busche, T., Schnaufer, F., Kalinowski, J., Antelmann, H.: The neutrophil oxidant hypothiocyanous acid causes a thiol-specific stress response and an oxidative shift of the bacillithiol redox potential in Staphylococcus aureus. Microbiology Spectrum . : e0325223 (2023).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [112]
  

  2023 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2984574

  Bergmann, M., Cieslak, C., DeTemple, V., Kless, A.C., Bredemeier-Rasche, S., Busche, T., Traidl, S., Schacht, V., Dobos, G., Franklin, C., Sachse, M.M., Stadler, R., Gutzmer, R., Schaper-Gerhardt, K.: Identifikation prädiktiver Biomarker bei Patientinnen und Patienten mit kutanen T-Zell-Lymphomen unter Therapie mit Mogamulizumab. Abstractband anlässlich des 33. Deutschen Hautkrebskongresses (ADO-Jahrestagung) 06.–09. September 2023 Hamburg. Journal der Deutschen Dermatologischen Gesellschaft. 21, p. 15. Wiley, Hoboken (2023).

  PUB | DOI | WoS
   
• [111]
  

  2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2982191

  Stanelle-Bertram, S., Beck, S., Mounogou, N.K., Schaumburg, B., Stoll, F., Al Jawazneh, A., Schmal, Z., Bai, T., Zickler, M., Beythien, G., Becker, K., de la Roi, M., Heinrich, F., Schulz, C., Sauter, M., Krasemann, S., Lange, P., Heinemann, A., van Riel, D., Leijten, L., Bauer, L., van den Bosch, T.P.P., Lopuhaä, B., Busche, T., Wibberg, D., Schaudien, D., Goldmann, T., Lüttjohann, A., Ruschinski, J., Jania, H., Müller, Z., Pinho Dos Reis, V., Krupp-Buzimkic, V., Wolff, M., Fallerini, C., Baldassarri, M., Furini, S., Norwood, K., Käufer, C., Schützenmeister, N., von Köckritz-Blickwede, M., Schroeder, M., Jarczak, D., Nierhaus, A., Welte, T., Kluge, S., McHardy, A.C., Sommer, F., Kalinowski, J., Krauss-Etschmann, S., Richter, F., von der Thüsen, J., Baumgärtner, W., Klingel, K., Ondruschka, B., Renieri, A., Gabriel, G.: CYP19A1 mediates severe SARS-CoV-2 disease outcome in males. Cell Reports Medicine . : 101152 (2023).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [110]
  

  2023 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2984072

  Cieslak, C., Rückert-Reed, C., Busche, T., Hain, C., Kalinowski, J., Schaper-Gerhardt, K., Gutzmer, R., Stadler, R.: T-cell receptor clonality analyses using nanopore sequencing for cutaneous T-cell lymphoma. The Abstract from The EORTC Cutaneous Lymphoma Tumour Group Annual Meeting. European Journal of Cancer. 190, Elsevier , Oxford (2023).

  PUB | DOI | WoS
   
• [109]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2981747

  Kurpejovic, E., Wibberg, D., Bastem, G., Burgardt, A., Busche, T., Altinisik Kaya, F.E., Dräger, A., Wendisch, V.F., Sariyar Akbulut, B.: Can Genome Sequencing Coupled to Flux Balance Analyses Offer Precision Guidance for Industrial Strain Development? The Lessons from Carbon Trafficking in Corynebacterium glutamicum ATCC 21573. OMICS: A Journal of Integrative Biology. 27, 434-443 (2023).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [108]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2980373

  Sagurna, L., Heinrich, S., Kaufmann, L.-S., Rückert-Reed, C., Busche, T., Wolf, A., Eickhoff, J., Klebl, B., Kalinowski, J., Bandow, J.E.: Characterization of the Antibacterial Activity of Quinone-Based Compounds Originating from the Alnumycin Biosynthetic Gene Cluster of a Streptomyces Isolate. Antibiotics. 12, : 1116 (2023).

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• [107]
  

  2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2981183

  Bitzenhofer, N.L., Höfel, C., Thies, S., Weiler, A.J., Eberlein, C., Heipieper, H.J., Batra-Safferling, R., Sundermeyer, P., Heidler, T., Sachse, C., Busche, T., Kalinowski, J., Belthle, T., Drepper, T., Jaeger, K.-E., Loeschcke, A.: Exploring engineered vesiculation by Pseudomonas putida KT2440 for natural product biosynthesis. Microbial Biotechnology. (2023).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [106]
  

  2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2978071

  Siebert, D., Busche, T., Saydam, E., Kalinowski, J., Rückert-Reed, C., Blombach, B.: Complete Genome Sequence of the Carboxydotrophic Knallgas Bacterium Pseudomonas carboxydohydrogena Strain DSM 1083. Microbiology Resource Announcements. (2023).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [105]
  

  2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2967760

  Pheiffer, F., Schneider, Y.K.-H., Hansen, E.H., Andersen, J.H., Isaksson, J., Busche, T., Rückert, C., Kalinowski, J., Zyl, L. van, Trindade, M.: Bioassay-Guided Fractionation Leads to the Detection of Cholic Acid Generated by the Rare Thalassomonas sp. Marine Drugs. 21, : 2 (2023).

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• [104]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2968518

  Dahle, S.W., Gaarden, S.I., Buhaug, J.F., Netzer, R., Attramadal, K.J.K., Busche, T., Aas, M., Ribicic, D., Bakke, I.: Long-term microbial community structures and dynamics in a commercial RAS during seven production batches of Atlantic salmon fry (Salmo salar). Aquaculture. 565, : 739155 (2023).

  PUB | DOI | WoS
   
• [103]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2963726

  Maraci, Ö., Antonatou-Papaioannou, A., Jünemann, S., Engel, K., Castillo-Gutiérrez, O., Busche, T., Kalinowski, J., Caspers, B.: Timing matters: Age-dependent impacts of the social environment and host selection on the avian gut microbiota. Microbiome. 10, 202 (2022).

  PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint
   
• [102]
  

  2022 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2987300

  S.Y. YEAP, C., H.A. NGUYEN, N., Blifernez-Klassen, O., Mussgnug, J.H., Busche, T., Kruse, O., SEVCU, A.: PHENOTYPIC RESPONSES of green alga CHLAMYDOMONAS REINHARDTII to nanoscale zero valent iron. NANOCON 2022 Conference Proeedings. NANOCON Conference Proeedings. 2022, p. 236-241. TANGER Ltd. (2022).

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• [101]
  

  2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2967517

  Fritsch, V.N., Linzner, N., Busche, T., Said, N., Weise, C., Kalinowski, J., Wahl, M.C., Antelmann, H.: The MerR-family regulator NmlR is involved in the defense against oxidative stress in Streptococcus pneumoniae. Molecular Microbiology . (2022).

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• [100]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967705

  Kiel, A., Creutz, I., Rückert, C., Kaltschmidt, B., Hütten, A., Niehaus, K., Busche, T., Kaltschmidt, B., Kaltschmidt, C.: Genome-Based Analysis of Virulence Factors and Biofilm Formation in Novel P. aeruginosa Strains Isolated from Household Appliances. Microorganisms. 10, : 2508 (2022).

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• [99]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967793

  Köller, N., Hahnke, S., Zverlov, V., Wibberg, D., Klingl, A., Busche, T., Klocke, M., Pühler, A., Schlüter, A., Liebl, W., Maus, I.: Anaeropeptidivorans aminofermentans gen. nov., sp. nov., a mesophilic proteolytic salt-tolerant bacterium isolated from a laboratory-scale biogas fermenter, and emended description of Clostridium colinum. International Journal of Systematic and Evolutionary Microbiology. 72, (2022).

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• [98]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2969696

  Busche, T., Dostalova, H., Rucka, L., Holatko, J., Barvik, I., Stepanek, V., Patek, M., Kalinowski, J.: Overlapping SigH and SigE sigma factor regulons in Corynebacterium glutamicum. Frontiers in Microbiology . 13, : 1059649 (2022).

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• [97]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967684

  Behle, A., Dietsch, M., Goldschmidt, L., Murugathas, W., Berwanger, L.C., Burmester, J., Yao, L., Brandt, D., Busche, T., Kalinowski, J., Hudson, E.P., Ebenhöh, O., Axmann, I.M., Machné, R.: Manipulation of topoisomerase expression inhibits cell division but not growth and reveals a distinctive promoter structure in . Nucleic Acids Research. : gkac1132 (2022).

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• [96]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2966624

  Hertel, O., Neuss, A., Busche, T., Brandt, D., Kalinowski, J., Bahnemann, J., Noll, T.: Enhancing stability of recombinant CHO cells by CRISPR/Cas9-mediated site-specific integration into regions with distinct histone modifications. Frontiers in Bioengineering and Biotechnology. 10, (2022).

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• [95]
  

  2022 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2967817

  Oppel, F., Gendreizig, S., Kühnel, P., Martínez-Ruiz, L., Shao, S., Schmidt, P., Hain, C., Schürmann, M., Hose, L., Pabla, H., Loganathan, L., Viyof Ful, F., Przybycin, V., Scholtz, L.-U., Brasch, F., Busche, T., Goon, P., Escames, G., Niehaus, K., Kalinowski, J., Sudhoff, H.: P28 Head and neck cancer cells differentiate resembling their tissue of origin. In: Amsterdam University Medical Centers (ed.) Abstracts of the 4th International Symposium on HPV Infection in Head and Neck Cancer Latest Advances in Biomarker-driven Management. Oral Oncology. 134, Elsevier (2022).

  PUB | DOI | WoS
   
• [94]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2961071

  Willenbücher, K., Wibberg, D., Huang, L., Conrady, M., Ramm, P., Gätcke, J., Busche, T., Brandt, C., Szewzyk, U., Schlüter, A., Barrero Canosa, J., Maus, I.: Phage Genome Diversity in a Biogas-Producing Microbiome Analyzed by Illumina and Nanopore GridION Sequencing. Microorganisms. 10, : 368 (2022).

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• [93]
  

  2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2967393

  Tseduliak, V.-M., Dolia, B., Ostash, I., Lopatniuk, M., Busche, T., Ochi, K., Kalinowski, J., Luzhetskyy, A., Fedorenko, V., Ostash, B.: Mutations within gene XNR_2147 for TetR-like protein enhance lincomycin resistance and endogenous specialized metabolism of Streptomyces albus J1074. Journal of Applied Genetics. (2022).

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• [92]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2966354

  Riese, C.N., Wittchen, M., Jerome, V., Freitag, R., Busche, T., Kalinowski, J., Schueler, D.: The transcriptomic landscape of Magnetospirillum gryphiswaldense during magnetosome biomineralization. BMC Genomics . 23, : 699 (2022).

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• [91]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2962520

  Krysenko, S., Okoniewski, N., Nentwich, M., Matthews, A., Bauerle, M., Zinser, A., Busche, T., Kulik, A., Gursch, S., Kemeny, A., Bera, A., Wohlleben, W.: A Second Gamma-Glutamylpolyamine Synthetase, GlnA2, Is Involved in Polyamine Catabolism in Streptomyces coelicolor. International journal of molecular sciences. 23, : 3752 (2022).

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• [90]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965159

  Schafhauser, T., Wibberg, D., Binder, A., Rückert, C., Busche, T., Wohlleben, W., Kalinowski, J.: Genome Assembly and Genetic Traits of the Pleuromutilin-Producer Clitopilus passeckerianus DSM1602. Journal of Fungi. 8, : 862 (2022).

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• [89]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2961676

  Ullmann, L., Wibberg, D., Busche, T., Rückert, C., Müsgens, A., Kalinowski, J., Blank, L.M.: Seventeen Ustilaginaceae High-Quality Genome Sequences Allow Phylogenomic Analysis and Provide Insights into Secondary Metabolite Synthesis. Journal of Fungi. 8, : 269 (2022).

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• [88]
  

  2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2961214

  Oberhofer, M., Malfent, F., Zehl, M., Urban, E., Wackerlig, J., Reznicek, G., Vignolle, G.A., Rückert, C., Busche, T., Wibberg, D., Zotchev, S.B.: Biosynthetic potential of the endophytic fungus Helotiales sp. BL73 revealed via compound identification and genome mining. Applied and Environmental Microbiology . : aem0251021 (2022).

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• [87]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2961455

  Stepanek, V., Dostalova, H., Busche, T., Blumenstein, J., Grulich, M., Plasil, L., Rucka, L., Nesvera, J., Patek, M.: Sigma regulatory network in Rhodococcus erythropolis CCM2595. FEMS Microbiology Letters. 369, : fnac014 (2022).

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• [86]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2961099

  Klaus, T., Ninck, S., Albersmeier, A., Busche, T., Wibberg, D., Jiang, J., Elcheninov, A.G., Zayulina, K.S., Kaschani, F., Braesen, C., Overkleeft, H.S., Kalinowski, J., Kublanov, I.V., Kaiser, M., Siebers, B.: Activity-Based Protein Profiling for the Identification of Novel Carbohydrate-Active Enzymes Involved in Xylan Degradation in the Hyperthermophilic Euryarchaeon Thermococcus sp. Strain 2319x1E. Frontiers in Microbiology . 12, : 734039 (2022).

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• [85]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952449

  Witte, K.E., Hertel, O., Windmöller, B.A., Helweg, L., Höving, A.L., Knabbe, C., Busche, T., Greiner, J., Kalinowski, J., Noll, T., Mertzlufft, F., Beshay, M., Pfitzenmaier, J., Kaltschmidt, B., Kaltschmidt, C., Banz-Jansen, C., Simonis, M.: Nanopore Sequencing Reveals Global Transcriptome Signatures of Mitochondrial and Ribosomal Gene Expressions in Various Human Cancer Stem-like Cell Populations. Cancers. 13, : 1136 (2021).

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• [84]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2954736

  Keysberg, C., Hertel, O., Schelletter, L., Busche, T., Sochart, C., Kalinowski, J., Hoffrogge, R., Otte, K., Noll, T.: Exploring the molecular content of CHO exosomes during bioprocessing. Applied Microbiology and Biotechnology. 105, 3673-3689 (2021).

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• [83]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2954272

  Droste, J., Rückert, C., Kalinowski, J., Hamed, M.B., Anné, J., Simoens, K., Bernaerts, K., Economou, A., Busche, T.: Extensive Reannotation of the Genome of the Model Streptomycete Streptomyces lividans TK24 Based on Transcriptome and Proteome Information. Frontiers in Microbiology. 12, : 604034 (2021).

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• [82]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2953016

  Haupka, C., Fernandes de Brito, L., Busche, T., Wibberg, D., Wendisch, V.F.: Genomic and transcriptomic investigation of the physiological response of the methylotroph Bacillus methanolicus to 5-aminovalerate. Frontiers in Microbiology. 12, : 664598 (2021).

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• [81]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955234

  Krysenko, S., Matthews, A., Busche, T., Bera, A., Wohlleben, W.: Poly- and Monoamine Metabolism in Streptomyces coelicolor: The New Role of Glutamine Synthetase-Like Enzymes in the Survival under Environmental Stress. Microbial Physiology. 31, 233-247 (2021).

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• [80]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956426

  Schlemmer, T., Barth, P., Weipert, L., Preußer, C., Hardt, M., Möbus, A., Busche, T., Koch, A.: Isolation and Characterization of Barley (Hordeum vulgare) Extracellular Vesicles to Assess Their Role in RNA Spray-Based Crop Protection. International journal of molecular sciences. 22, : 7212 (2021).

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• [79]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2950415

  Zanini, S., Secic, E., Busche, T., Galli, M., Zheng, Y., Kalinowski, J., Kogel, K.-H.: Comparative Analysis of Transcriptome and sRNAs Expression Patterns in the Brachypodium distachyon- Magnaporthe oryzae Pathosystems. International journal of molecular sciences. 22, : 650 (2021).

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• [78]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957501

  Brandt, D., Simunovic, M., Busche, T., Haak, M., Belmann, P., Jünemann, S., Schulz, T., Klages, L.J., Vinke, S., Beckstette, M., Pohl, E., Scherer, C., Sczyrba, A., Kalinowski, J.: Multiple Occurrences of a 168-Nucleotide Deletion in SARS-CoV-2 ORF8, Unnoticed by Standard Amplicon Sequencing and Variant Calling Pipelines. Viruses. 13, : 1870 (2021).

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• [77]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2954220

  Prell, C., Busche, T., Rückert, C., Nolte, L., Brandenbusch, C., Wendisch, V.F.: Adaptive Laboratory Evolution accelerated glutarate production by Corynebacterium glutamicum. Microbial Cell Factories. 20, 97 (2021).

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• [76]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2958416

  Luttermann, T., Rückert, C., Wibberg, D., Busche, T., Schwarzhans, J.-P., Friehs, K., Kalinowski, J.: Establishment of a near-contiguous genome sequence of the citric acid producing yeast DSM 3286 with resolution of rDNA clusters and telomeres. NAR Genomics and Bioinformatics. 3, 13 (2021).

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [75]
  

  2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2959606

  Creutz, I., Busche, T., Layer, F., Bednarz, H., Kalinowski, J., Niehaus, K.: Evaluation of virulence potential of methicillin-sensitive and methicillin-resistant Staphylococcus aureus isolates from a German refugee cohort. Travel medicine and infectious disease. : 102204 (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [74]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955527

  Hrab, P., Rückert, C., Busche, T., Ostash, I., Kalinowski, J., Fedorenko, V., Yushchuk, O., Ostash, B.: Complete genome sequence of Streptomyces cyanogenus S136, producer of anticancer angucycline landomycin A. 3 Biotech. 11, : 282 (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [73]
  

  2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2958743

  Van Loi, V., Busche, T., Fritsch, V.N., Weise, C., Gruhlke, M.C.H., Slusarenko, A.J., Kalinowski, J., Antelmann, H.: The two-Cys-type TetR repressor GbaA confers resistance under disulfide and electrophile stress in Staphylococcus aureus. Free Radical Biology and Medicine. 177, 120-131 (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [72]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959487

  Dziuba, M., Riese, C.N., Borgert, L., Wittchen, M., Busche, T., Kalinowski, J., Uebe, R., Schueler, D.: The Complex Transcriptional Landscape of Magnetosome Gene Clusters in Magnetospirillum gryphiswaldense. mSystems. 6, : e00893-21 (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [71]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2958718

  Vollmann, D.J., Busche, T., Rückert, C., Nett, M.: Complete Genome Sequence of the Nonmotile Myxococcus xanthus Strain NM. Microbiology Resource Announcements. 10, : e0098921 (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [70]
  

  2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2957511

  Novakova, R., Rückert, C., Knirschova, R., Feckova, L., Busche, T., Csolleiova, D., Homerova, D., Rezuchova, B., Javorova, R., Sevcikova, B., Kalinowski, J., Kormanec, J.: The linear plasmid pSA3239 is essential for the replication of the Streptomyces lavendulae subsp. lavendulae CCM 3239 chromosome. Research in microbiology. : 103870 (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [69]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957898

  Fulde, M., van Vorst, K., Zhang, K., Westermann, A.J., Busche, T., Huei, Y.C., Welitschanski, K., Froh, I., Pagelow, D., Plendl, J., Pfarrer, C., Kalinowski, J., Vogel, J., Valentin-Weigand, P., Hensel, M., Tedin, K., Repnik, U., Hornef, M.W.: SPI2 T3SS effectors facilitate enterocyte apical to basolateral transmigration of Salmonella-containing vacuoles in vivo. Gut microbes. 13, : 1973836 (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [68]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956157

  Sekurova, O.N., Sun, Y.-Q., Zehl, M., Rückert, C., Stich, A., Busche, T., Kalinowski, J., Zotchev, S.B.: Coupling of the engineered DNA "mutator" to a biosensor as a new paradigm for activation of silent biosynthetic gene clusters in Streptomyces. Nucleic acids research. : gkab583 (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [67]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956600

  Schaffert, L., Ruwe, M., Milse, J., Hanuschka, K., Ortseifen, V., Droste, J., Brandt, D., Schlüter, L., Kutter, Y., Vinke, S., Viehöfer, P., Jacob, L., Lübke, N.-C., Schulte-Berndt, E., Hain, C., Linder, M., Schmidt, P., Wollenschläger, L., Luttermann, T., Thieme, E., Hassa, J., Haak, M., Wittchen, M., Mentz, A., Persicke, M., Busche, T., Rückert, C.: Classification of three corynebacterial strains isolated from a small paddock in North Rhine-Westphalia: proposal of Corynebacterium kalinowskii sp. nov., Corynebacterium comes sp. nov. and Corynebacterium occultum sp. nov. International Journal of Systematic and Evolutionary Microbiology. 71, (2021).

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [66]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957237

  Secic, E., Zanini, S., Wibberg, D., Jelonek, L., Busche, T., Kalinowski, J., Nasfi, S., Thielmann, J., Imani, J., Steinbrenner, J., Kogel, K.-H.: A novel plant-fungal association reveals fundamental sRNA and gene expression reprogramming at the onset of symbiosis. BMC Biology. 19, : 171 (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [65]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956918

  Faßhauer, P., Busche, T., Kalinowski, J., Mäder, U., Poehlein, A., Daniel, R., Stülke, J.: Functional Redundancy and Specialization of the Conserved Cold Shock Proteins in Bacillus subtilis. Microorganisms. 9, : 1434 (2021).

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [64]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2951544

  Yushchuk, O., Ostash, I., Mosker, E., Vlasiuk, I., Deneka, M., Rückert, C., Busche, T., Fedorenko, V., Kalinowski, J., Sussmuth, R.D., Ostash, B.: Eliciting the silent lucensomycin biosynthetic pathway in Streptomyces cyanogenus S136 via manipulation of the global regulatory gene adpA. Scientific reports. 11, : 3507 (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [63]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955919

  Schmitz, L.M., Hageneier, F., Rosenthal, K., Busche, T., Brandt, D., Kalinowski, J., Lutz, S.: Recombinant expression and characterization of novel P450s from Actinosynnema mirum. Bioorganic & medicinal chemistry. 42, : 116241 (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [62]
  

  2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2954380

  Yushchuk, O., Vior, N.M., Andreo-Vidal, A., Berini, F., Rückert, C., Busche, T., Binda, E., Kalinowski, J., Truman, A.W., Marinelli, F.: Genomic-Led Discovery of a Novel Glycopeptide Antibiotic by Nonomuraea coxensis DSM 45129. ACS chemical biology. (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [61]
  

  2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2952997

  Benninghoff, J.C., Kuschmierz, L., Zhou, X., Albersmeier, A., Pham, T.K., Busche, T., Wright, P.C., Kalinowski, J., Makarova, K.S., Brasen, C., Flemming, H.-C., Wingender, J., Siebers, B.: Response of the thermoacidophilic Archaeon Sulfolobus acidocaldarius to solvent stress exemplified by 1-butanol exposure. Applied and environmental microbiology. (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [60]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2951630

  Maraci, Ö., Antonatou-Papaioannou, A., Jünemann, S., Castillo, O., Busche, T., Kalinowski, J., Caspers, B.: The Gut Microbial Composition Is Species-Specific and Individual-Specific in Two Species of Estrildid Finches, the Bengalese Finch and the Zebra Finch. Frontiers in Microbiology. 12, : 619141 (2021).

  PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
   
• [59]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952703

  Zwiener, T., Mickoleit, F., Dziuba, M., Rückert, C., Busche, T., Kalinowski, J., Faivre, D., Uebe, R., Schüler, D.: Identification and elimination of genomic regions irrelevant for magnetosome biosynthesis by large-scale deletion in Magnetospirillum gryphiswaldense. BMC Microbiology. 21, : 65 (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [58]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952132

  Zwiener, T., Dziuba, M., Mickoleit, F., Rückert, C., Busche, T., Kalinowski, J., Uebe, R., Schueler, D.: Towards a 'chassis' for bacterial magnetosome biosynthesis: genome streamlining of Magnetospirillum gryphiswaldense by multiple deletions. Microbial Cell Factories. 20, : 35 (2021).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [57]
  

  2020 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2987301

  S.Y. YEAP, C., H.A. NGUYEN, N., Blifernez-Klassen, O., Mussgnug, J.H., Busche, T., Kruse, O., SEVCU, A.: RNA extraction from soil bacterium Pseudomonas putida and green alga Raphidocelis subcapitata after exposure to nanoscale zero valent iron. NANOCON 2020 Conference Proeedings. NANOCON Conference Proeedings. 2020, p. 477-482. TANGER Ltd. (2020).

  PUB | PDF | DOI
   
• [56]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949180

  Walter, T., Veldmann, K., Götker, S., Busche, T., Rückert, C., Kashkooli, A.B., Paulus, J., Cankar, K., Wendisch, V.F.: Physiological response of Corynebacterium glutamicum to indole. Microorganisms. 8, : 1945 (2020).

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [55]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949422

  Guerrero-Garzon, J.F., Madland, E., Zehl, M., Singh, M., Rezaei, S., Aachmann, F.L., Courtade, G., Urban, E., Rückert, C., Busche, T., Kalinowski, J., Cao, Y.-R., Jiang, Y., Jiang, C.-L., Selivanova, G., Zotchev, S.B.: Class IV Lasso Peptides Synergistically Induce Proliferation of Cancer Cells and Sensitize Them to Doxorubicin. iScience. 23, : 101785 (2020).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [54]
  

  2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2948756

  Fritsch, V.N., Loi, V.V., Busche, T., Tung, Q.N., Lill, R., Horvatek, P., Wolz, C., Kalinowski, J., Antelmann, H.: The alarmone (p)ppGpp confers tolerance to oxidative stress during the stationary phase by maintenance of redox and iron homeostasis in Staphylococcus aureus. Free radical biology & medicine. (2020).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [53]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948762

  Graf, M., Haas, T., Teleki, A., Feith, A., Cerff, M., Wiechert, W., Nöh, K., Busche, T., Kalinowski, J., Takors, R.: Revisiting the Growth Modulon of Corynebacterium glutamicum Under Glucose Limited Chemostat Conditions. Frontiers in Bioengineering and Biotechnology. 8, : 584614 (2020).

  PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
   
• [52]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942709

  Tippelt, A., Busche, T., Rückert, C., Nett, M.: Complete Genome Sequence of the Cryptophycin-Producing Cyanobacterium Nostoc sp. Strain ATCC 53789. Microbiology resource announcements. 9, : e00040 (2020).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [51]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945532

  Bekiesch, P., Zehl, M., Domingo-Contreras, E., Martin, J., Perez-Victoria, I., Reyes, F., Kaplan, A., Rückert, C., Busche, T., Kalinowski, J., Zotchev, S.B.: Viennamycins: Lipopeptides Produced by a Streptomyces sp. Journal of natural products. 83, 2381–2389 (2020).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [50]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945782

  Franco, A., Rückert, C., Blom, J., Busche, T., Reichert, J., Schubert, P., Goesmann, A., Kalinowski, J., Wilke, T., Kampfer, P., Glaeser, S.P.: High diversity of Vibrio spp. associated with different ecological niches in a marine aquaria system and description of Vibrio aquimaris sp. nov. Systematic and applied microbiology. 43, : 126123 (2020).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [49]
  

  2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2945214

  Linzner, N., Fritsch, V.N., Busche, T., Tung, Q.N., Loi, V.V., Bernhardt, J., Kalinowski, J., Antelmann, H.: The plant-derived naphthoquinone lapachol causes an oxidative stress response in Staphylococcus aureus. Free radical biology & medicine. 158, 126-136 (2020).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [48]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944774

  Siebert, D., Busche, T., Metz, A.Y., Smaili, M., Queck, B.A.W., Kalinowski, J., Eikmanns, B.J.: Genetic Engineering of Oligotropha carboxidovorans Strain OM5-A Promising Candidate for the Aerobic Utilization of Synthesis Gas. ACS SYNTHETIC BIOLOGY. 9, 1426-1440 (2020).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [47]
  

  2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2943712

  Kissling, L., Schneider, C., Seibel, K., Dorjjugder, N., Busche, T., Kalinowski, J., Mack, M.: The roseoflavin producer Streptomyces davaonensis has a high catalytic capacity and specific genetic adaptations with regard to the biosynthesis of riboflavin. Environmental microbiology. (2020).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [46]
  

  2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2942457

  Guerrero-Garzón, J.F., Zehl, M., Schneider, O., Rückert, C., Busche, T., Kalinowski, J., Bredholt, H., Zotchev, S.B.: Streptomyces spp. From the Marine Sponge Antho dichotoma: Analyses of Secondary Metabolite Biosynthesis Gene Clusters and Some of Their Products. Frontiers in Microbiology. 11, : 437 (2020).

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [45]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935870

  Haas, T., Graf, M., Niess, A., Busche, T., Kalinowski, J., Blombach, B., Takors, R.: Identifying the Growth Modulon of Corynebacterium glutamicum. FRONTIERS IN MICROBIOLOGY. 10, : 974 (2019).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [44]
  

  2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936724

  Fritsch, V.N., Loi, V.V., Busche, T., Sommer, A., Tedin, K., Nurnberg, D.J., Kalinowski, J., Bernhardt, J., Fulde, M., Antelmann, H.: The MarR-type repressor MhqR confers quinone and antimicrobial resistance in <i>Staphylococcus aureus</i>. Antioxidants & redox signaling. 31, 1235-1252 (2019).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [43]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933296

  Dostalova, H., Busche, T., Holatko, J., Rucka, L., Stepanek, V., Barvik, I., Nesvera, J., Kalinowski, J., Patek, M.: Overlap of Promoter Recognition Specificity of Stress Response Sigma Factors SigD and SigH in Corynebacterium glutamicum ATCC 13032. FRONTIERS IN MICROBIOLOGY. 9, : 3287 (2019).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [42]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933348

  Jahanshah, G., Miess, H., Busche, T., Rückert, C., Kalinowski, J., Rokni-Zadeh, H., Gross, H.: Draft Genome Sequence of Micromonospora sp. Strain MW-13, a Bacterial Strain with Antibacterial Properties and Plant Growth Promotion Potential Isolated from the Rhizosphere of Wheat in Iran. Microbiology resource announcements. 8, : e01375-18 (2019).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [41]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936260

  Arenas-Lopez, C., Locker, J., Orol, D., Walter, F., Busche, T., Kalinowski, J., Minton, N.P., Kovacs, K., Winzer, K.: The genetic basis of 3-hydroxypropanoate metabolism in Cupriavidus necator H16. Biotechnology for biofuels. 12, : 150 (2019).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [40]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2939523

  Ruwe, M., Persicke, M., Busche, T., Müller, B., Kalinowski, J.: Physiology and Transcriptional Analysis of (p)ppGpp-Related Regulatory Effects in Corynebacterium glutamicum. Frontiers in Microbiology. 10, : 2769 (2019).

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
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  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938413

  Schaffert, L., Schneiker-Bekel, S., Dymek, S., Droste, J., Persicke, M., Busche, T., Brandt, D., Pühler, A., Kalinowski, J.: Essentiality of the Maltase AmlE in Maltose Utilization and Its Transcriptional Regulation by the Repressor AmlR in the Acarbose-Producing Bacterium Actinoplanes sp. SE50/110. Frontiers in Microbiology. 10, : 2448 (2019).

  PUB | Dateien verfügbar | DOI | Download (ext.) | WoS | PubMed | Europe PMC | EBI - ENA Project
   
• [38]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936723

  Lopatniuk, M., Myronovskyi, M., Nottebrock, A., Busche, T., Kalinowski, J., Ostash, B., Fedorenko, V., Luzhetskyy, A.: Effect of "ribosome engineering" on the transcription level and production of S. albus indigenous secondary metabolites. Applied microbiology and biotechnology. 103, 7097–7110 (2019).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [37]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439

  Schaffert, L., März, C., Burkhardt, L., Droste, J., Brandt, D., Busche, T., Rosen, W., Schneiker-Bekel, S., Persicke, M., Pühler, A., Kalinowski, J.: Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110. Microbial Cell Factories. 18, : 114 (2019).

  PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
   
• [36]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935892

  Loi, V.V., Huyen, N.T.T., Busche, T., Tung, Q.N., Gruhlke, M.C.H., Kalinowski, J., Bernhardt, J., Slusarenko, A.J., Antelmann, H.: Staphylococcus aureus responds to allicin by global S-thioallylation - Role of the Brx/BSH/YpdA pathway and the disulfide reductase MerA to overcome allicin stress. Free radical biology & medicine. 139, 55-69 (2019).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [35]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936033

  Tsolis, K.C., Hamed, M.B., Simoens, K., Koepff, J., Busche, T., Rückert, C., Oldiges, M., Kalinowski, J., Anne, J., Kormanec, J., Bernaerts, K., Karamanou, S., Economou, A.: Secretome Dynamics in a Gram-Positive Bacterial Model. MOLECULAR & CELLULAR PROTEOMICS. 18, 423-436 (2019).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [34]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936035

  Koshla, O.T., Rokytskyy, I.V., Ostash, I.S., Busche, T., Kalinowski, J., Moesker, E., Suessmuth, R.D., Fedorenko, V.O., Ostash, B.O.: Secondary Metabolome and Transcriptome of Streptomyces albus J1074 in Liquid Medium SG2. CYTOLOGY AND GENETICS. 53, 1-7 (2019).

  PUB | DOI | WoS
   
• [33]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917042

  Kranz, A., Busche, T., Vogel, A., Usadel, B., Kalinowski, J., Bott, M., Polen, T.: RNAseq analysis of alpha-proteobacterium Gluconobacter oxydans 621H. BMC GENOMICS. 19, : 17 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [32]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932968

  Rebets, Y., Tsolis, K.C., Gudmundsdottir, E.E., Koepff, J., Wawiernia, B., Busche, T., Bleidt, A., Horbal, L., Myronovskyi, M., Ahmed, Y., Wiechert, W., Rueckert, C., Hamed, M.B., Bilyk, B., Anne, J., Fridjonsson, O., Kalinowski, J., Oldiges, M., Economou, A., Luzhetskyy, A.: Characterization of Sigma Factor Genes in Streptomyces lividans TK24 Using a Genomic Library-Based Approach for Multiple Gene Deletions. FRONTIERS IN MICROBIOLOGY. 9, : 3033 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [31]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932978

  Busche, T., Hillion, M., Loi, V.V., Berg, D., Walther, B., Semmler, T., Strommenger, B., Witte, W., Cuny, C., Mellmann, A., Holmes, M.A., Kalinowski, J., Adrian, L., Bernhardt, J., Antelmann, H.: Comparative Secretome Analyses of Human and Zoonotic Staphylococcus aureus Isolates CC8, CC22, and CC398. MOLECULAR & CELLULAR PROTEOMICS. 17, 2412-2433 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [30]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933021

  Jiao, J., Paterson, J., Busche, T., Rückert, C., Kalinowski, J., Harwani, D., Grosso, H.: Draft Genome Sequence of Streptomyces sp. Strain DH-12, a Soilborne Isolate from the Thar Desert with Broad-Spectrum Antibacterial Activity. MICROBIOLOGY RESOURCE ANNOUNCEMENTS. 6, : UNSP e00108-18 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [29]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932961

  Daniels, W., Bouvin, J., Busche, T., Rückert, C., Simoens, K., Karamanou, S., Van Mellaert, L., Frojonsson, O.H., Nicolai, B., Economou, A., Kalinowski, J., Anne, J., Bernaerts, K.: Transcriptomic and fluxomic changes in Streptomyces lividans producing heterologous protein. MICROBIAL CELL FACTORIES. 17, : 198 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [28]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920940

  Kibret, M., Guerrero-Garzon, J.F., Urban, E., Zehl, M., Wronski, V.-K., Rückert, C., Busche, T., Kalinowski, J., Rollinger, J.M., Abate, D., Zotchev, S.B.: Streptomyces spp. From Ethiopia Producing Antimicrobial Compounds: Characterization via Bioassays, Genome Analyses, and Mass Spectrometry. FRONTIERS IN MICROBIOLOGY. 9, : 13 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [27]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920679

  Busche, T., Tsolis, K.C., Koepff, J., Rebets, Y., Rückert, C., Hamed, M.B., Bleidt, A., Wiechert, W., Lopatniuk, M., Yousra, A., Anne, J., Karamanou, S., Oldiges, M., Kalinowski, J., Luzhetskyy, A., Economou, A.: Multi-Omics and Targeted Approaches to Determine the Role of Cellular Proteases in Streptomyces Protein Secretion. FRONTIERS IN MICROBIOLOGY. 9, : 12 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [26]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930282

  Lange, J., Muench, E., Mueller, J., Busche, T., Kalinowski, J., Takors, R., Blombach, B.: Deciphering the Adaptation of Corynebacterium glutamicum in Transition from Aerobiosis via Microaerobiosis to Anaerobiosis. GENES. 9, : 297 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [25]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917736

  Vu, V.L., Busche, T., Tedin, K., Bernhardt, J., Wollenhaupt, J., Huyen, N.T.T., Weise, C., Kalinowski, J., Wahl, M.C., Fulde, M., Antelmann, H.: Redox-Sensing Under Hypochlorite Stress and Infection Conditions by the Rrf2-Family Repressor HypR in Staphylococcus aureus. ANTIOXIDANTS & REDOX SIGNALING. 29, 22 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [24]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919053

  Tsolis, K.C., Tsare, E.-P., Orfanoudaki, G., Busche, T., Kanaki, K., Ramakrishnan, R., Rousseau, F., Schymkowitz, J., Rückert, C., Kalinowski, J., Anne, J., Karamanou, S., Klapa, M.I., Economou, A.: Comprehensive subcellular topologies of polypeptides in Streptomyces. MICROBIAL CELL FACTORIES. 17, : 12 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [23]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918969

  Busche, T., Novakova, R., Al'Dilaimi, A., Homerova, D., Feckova, L., Rezuchova, B., Mingyar, E., Csolleiova, D., Bekeova, C., Winkler, A., Sevcikova, B., Kalinowski, J., Kormanec, J., Rückert, C.: Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin. Genome Announcements. 6, : e00103-18 (2018).

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [22]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917296

  Wittchen, M., Busche, T., Gaspar, A.H., Lee, J.H., Ton-That, H., Kalinowski, J., Tauch, A.: Transcriptome sequencing of the human pathogen Corynebacterium diphtheriae NCTC 13129 provides detailed insights into its transcriptional landscape and into DtxR-mediated transcriptional regulation. BMC Genomics. 19, : 82 (2018).

  PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
   
• [21]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930276

  Ludwig, P., Sevin, D.C., Busche, T., Kalinowski, J., Bourdeaux, F., Grininger, M., Mack, M.: Characterization of the small flavin-binding dodecin in the roseoflavin producer Streptomyces davawensis. MICROBIOLOGY-SGM. 164, 908-919 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [20]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920690

  Schwentner, A., Feith, A., Muench, E., Busche, T., Rückert, C., Kalinowski, J., Takors, R., Blombach, B.: Metabolic engineering to guide evolution - Creating a novel mode for L-valine production with Corynebacterium glutamicum. METABOLIC ENGINEERING. 47, 31-41 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [19]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920259

  Heine, T., Zimmerling, J., Ballmann, A., Kleeberg, S.B., Rückert, C., Busche, T., Winkler, A., Kalinowski, J., Poetsch, A., Scholtissek, A., Oelschlaegel, M., Schmidt, G., Tischler, D.: On the Enigma of Glutathione-Dependent Styrene Degradation in Gordonia rubripertincta CWB2. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 84, : 16 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [18]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918672

  Koepff, J., Morschett, H., Busche, T., Winkler, A., Kalinowski, J., Wiechert, W., Oldiges, M.: Differential transcriptomic analysis reveals hidden light response in Streptomyces lividans. BIOTECHNOLOGY PROGRESS. 34, 287-292 (2018).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [17]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911272

  Hillion, M., Bernhardt, J., Busche, T., Rossius, M., Maaß, S., Becher, D., Rawat, M., Wirtz, M., Hell, R., Rückert, C., Kalinowski, J., Antelmann, H.: Monitoring global protein thiol-oxidation and protein S-mycothiolation in Mycobacterium smegmatis under hypochlorite stress. Sci Rep. 7, : 1195 (2017).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [16]
  

  2017 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2913400

  Nouioui, I., Rückert, C., Willemse, J., van Wezel, G.P., Klenk, H.-P., Busche, T., Kalinowski, J., Bredholt, H., Zotchev, S.B.: Actinoalloteichus fjordicus sp. nov. isolated from marine sponges: phenotypic, chemotaxonomic and genomic characterisation. Antonie Van Leeuwenhoek. Journal of Microbiology. 110, 1705-1717 (2017).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [15]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916525

  Dostalova, H., Holatko, J., Busche, T., Rucka, L., Rapoport, A., Halada, P., Nesvera, J., Kalinowski, J., Patek, M.: Assignment of sigma factors of RNA polymerase to promoters in Corynebacterium glutamicum. AMB EXPRESS. 7, : 133 (2017).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [14]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916533

  Sun, Y.-Q., Busche, T., Rückert, C., Paulus, C., Rebets, Y., Novakova, R., Kalinowski, J., Luzhetskyy, A., Kormanec, J., Sekurova, O.N., Zotchev, S.B.: Development of a Biosensor Concept to Detect the Production of Cluster-Specific Secondary Metabolites. ACS SYNTHETIC BIOLOGY. 6, 1026-1033 (2017).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [13]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916447

  Schneefeld, M., Busche, T., Geffers, R., Kalinowski, J., Bange, F.-C.: The transcriptional regulator LysG (Rv1985c) of Mycobacterium tuberculosis activates lysE (Rv1986) in a lysine-dependent manner. PLOS ONE. 12, : e0186505 (2017).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [12]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2912419

  Taniguchi, H., Busche, T., Patschkowski, T., Niehaus, K., Patek, M., Kalinowski, J., Wendisch, V.F.: Physiological roles of sigma factor SigD in Corynebacterium glutamicum. BMC Microbiology. 17, : 158 (2017).

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [11]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911273

  Koepff, J., Keller, M., Tsolis, C.K., Busche, T., Rückert, C., Hamed, M.B., Anné, J., Kalinowski, J., Wiechert, W., Economou, A., Oldiges, M.: Fast and reliable strain characterization of Streptomyces lividans through micro-scale cultivation. Biotechnol Bioeng. 114, 2011-2022 (2017).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [10]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905634

  Busche, T., Winkler, A., Wedderhoff, I., Rückert, C., Kalinowski, J., Lucana, D.O. de O.: Deciphering the Transcriptional Response Mediated by the Redox-Sensing System HbpS-SenS-SenR from Streptomycetes. PLOS ONE. 11, : e0159873 (2016).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [9]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917143

  Wibberg, D., Al-Dilaimi, A., Busche, T., Wedderhoff, I., Schrempf, H., Kalinowski, J., Lucana, D.O. de O.: Complete genome sequence of Streptomyces reticuli, an efficient degrader of crystalline cellulose. JOURNAL OF BIOTECHNOLOGY. 222, 13-14 (2016).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [8]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907748

  Jagmann, N., Bleicher, V., Busche, T., Kalinowski, J., Philipp, B.: The guanidinobutyrase GbuA is essential for the alkylquinolone-regulated pyocyanin production during parasitic growth of Pseudomonas aeruginosa in co-culture with Aeromonas hydrophila. ENVIRONMENTAL MICROBIOLOGY. 18, 3550-3564 (2016).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [7]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2719877

  Rückert, C., Albersmeier, A., Busche, T., Jaenicke, S., Winkler, A., Friðjónsson, Ó.H., Hreggviðsson, G.Ó., Lambert, C., Badcock, D., Bernaerts, K., Anne, J., Economou, A., Kalinowski, J.: Complete genome sequence of Streptomyces lividans TK24. Journal of Biotechnology. 199, 21-22 (2015).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [6]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2656728

  Chi, B.K., Busche, T., Van Laer, K., Baesell, K., Becher, D., Clermont, L., Seibold, G.M., Persicke, M., Kalinowski, J., Messens, J., Antelmann, H.: Protein S-Mycothiolation Functions as Redox-Switch and Thiol Protection Mechanism in Corynebacterium glutamicum Under Hypochlorite Stress. Antioxidants & Redox Signaling. 20, 589-605 (2014).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [5]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676806

  Busche, T., Pfeifer-Sancar, K., Rückert, C., Kalinowski, J.: Identifizierung von Promotoren in Corynebacterium glutamicum. BIOspektrum. 20, 284-287 (2014).

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• [4]
  

  2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2555771

  Pátek, M., Holátko, J., Busche, T., Kalinowski, J., Nešvera, J.: Corynebacterium glutamicum promoters: a practical approach. Microbial Biotechnology. 6, 103-117 (2013).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [3]
  

  2013 | Bielefelder E-Dissertation | PUB-ID: 2644932

  Busche, T.: Analyse von Regulationsnetzwerken der Extracytoplasmic Function (ECF)-Sigmafaktoren in Corynebacterium glutamicum. Universitätsbibliothek Bielefeld, Bielefeld (2013).

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• [2]
  

  2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2555355

  Plassmeier, J., Busche, T., Molck, S., Persicke, M., Pühler, A., Rückert, C., Kalinowski, J.: A propionate-inducible expression system based on the Corynebacterium glutamicum prpD2 promoter and PrpR activator and its application for the redirection of amino acid biosynthesis pathways. Journal of Biotechnology. 163, 225-232 (2013).

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [1]
  

  2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2528277

  Busche, T., Silar, R., Picmanova, M., Patek, M., Kalinowski, J.: Transcriptional regulation of the operon encoding stress-responsive ECF sigma factor SigH and its anti-sigma factor RshA, and control of its regulatory network in Corynebacterium glutamicum. BMC Genomics. 13, : 445 (2012).

  PUB | PDF | DOI | WoS | PubMed | Europe PMC