24 Publikationen

2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915890
Analyzing large scale genomic data on the cloud with Sparkhit
Huang L, Krüger J, Sczyrba A (2018)
Bioinformatics 34(9): 1457-1465.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917037
Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome
Verwaaijen B, Wibberg D, Nelkner J, Gordin M, Rupp O, Winkler A, Bremges A, Blom J, Grosch R, Pühler A, Schlüter A (2018)
Journal of Biotechology 267: 12-18.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2913921
Pan-genome Storage and Analysis Techniques
Zekic T, Holley G, Stoye J (2018)
In: Comparative Genomics. Methods and Protocols. Setubal JC, Stadler P, Stoye J (Eds); Methods in Molecular Biology, 1704. New York: Springer Verlag: 29-53.
PUB | DOI
 
2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2913922
Family-Free Genome Comparison
Dörr D, Feijão P, Stoye J (2018)
In: Comparative Genomics: Methods and Protocols. Setubal JC, Stadler P, Stoye J (Eds); Methods in Molecular Biology, 1704. New York: Springer Verlag: 331-342.
PUB | DOI
 
2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2913924
Comparative Methods for Reconstructing Ancient Genome Organization
Anselmetti Y, Luhmann N, Bérard S, Tannier E, Chauve C (2018)
In: Comparative Genomics: Methods and Protocols. Setubal JC, Stoye J, Stadler P (Eds); Methods in Molecular Biology, 1704. New York, NY: Humana Press: 343-362.
PUB | DOI
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915273 OA
Interpretation of Linear Classifiers by Means of Feature Relevance Bounds
Göpfert C, Pfannschmidt L, Göpfert JP, Hammer B (2018)
Neurocomputing 298: 69-79.
PUB | PDF | DOI | WoS
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915515
Novel candidate genes important for asthma and hypertension comorbidity revealed from associative gene networks
Saik OV, Demenkov PS, Ivanisenko TV, Bragina EY, Freidin MB, Goncharova IA, Dosenko VE, Zolotareva O, Hofestädt R, Lavrik IN, Rogaev EI, et al. (2018)
BMC Medical Genomics 11(1): 15.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2921026 OA
High Quality de Novo Transcriptome Assembly of Croton tiglium
Haak M, Vinke S, Keller W, Droste J, Rückert C, Kalinowski J, Pucker B (2018)
Frontiers in Molecular Biosciences 5: 62.
PUB | PDF | DOI | Download (ext.)
 
2018 | Preprint | Veröffentlicht | PUB-ID: 2932138 OA
Integrating Molecular Biology and Bioinformatics Education
Pucker B, Schilbert H, Schumacher SF (2018)
Preprints.
PUB | PDF | Download (ext.)
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919005 OA
GraphTeams. A method for discovering spatial gene clusters in Hi-C sequencing data
Schulz T, Stoye J, Dörr D (2018)
BMC Genomics 19(Suppl. 5): 308.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918218 OA
A Novel methodology for characterizing cell subpopulations in automated time-lapse microscopy
Hattab G, Wiesmann V, Becker A, Munzner T, Nattkemper TW (2018)
Frontiers in Bioengineering and Biotechnology 6: 17.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918481
Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework
Luhmann N, Chauve C, Stoye J, Wittler R (2018)
IEEE/ACM Transactions on Computational Biology and Bioinformatics 15(6): 2094-2100.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2917896
flowLearn: Fast and precise identification and quality checking of cell populations in flow cytometry
Lux M, Brinkman RR, Chauve C, Laing A, Lorenc A, Abeler-Dörner L, Hammer B (2018)
Bioinformatics.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933309
Molecular Relationships between Bronchial Asthma and Hypertension as Comorbid Diseases
Bragina EY, Goncharova IA, Garaeva AF, Nemerov, Evgeniy V, Babovskaya AA, Karpov AB, Semenova, Yulia V, Zhalsanova IZ, Gomboeva DE, Saik, Olga V, Zolotareva O, et al. (2018)
JOURNAL OF INTEGRATIVE BIOINFORMATICS 15(4): 20180052.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933312
Search for New Candidate Genes Involved in the Comorbidity of Asthma and Hypertension Based on Automatic Analysis of Scientific Literature
Saik, Olga V, Demenkov PS, Ivanisenko, Timofey V, Bragina EY, Freidin MB, Dosenko VE, Zolotareva O, Choynzonov EL, Hofestädt R, Ivanisenko VA (2018)
JOURNAL OF INTEGRATIVE BIOINFORMATICS 15(4): 20180054.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933313
GenCoNet - A Graph Database for the Analysis of Comorbidities by Gene Networks
Shoshi A, Hofestädt R, Zolotareva O, Friedrichs M, Maier A, Ivanisenko VA, Dosenko VE, Bragina EY (2018)
JOURNAL OF INTEGRATIVE BIOINFORMATICS 15(4): 20180049.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2940797
ddPCRclust: an R package and Shiny app for automated analysis of multiplexed ddPCR data
Brink B, Meskas J, Brinkman RR (2018)
Bioinformatics 34(15): 2687-2689.
PUB | DOI
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931048 OA PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931064 OA
Modeling and Simulating the Aerobic Carbon Metabolism of a Green Microalga Using Petri Nets and New Concepts of VANESA
Brinkrolf C, Henke NA, Ochel L, Pucker B, Kruse O, Lutter P (2018)
Journal of Integrative Bioinformatics 15(3): 20180018.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2018 | Preprint | Veröffentlicht | PUB-ID: 2931225 OA
Harnessing natural diversity to identify key amino acid residues in prolidase
Schilbert H, Pellegrinelli V, Rodriguez-Cuenca S, Vidal-Puig A, Pucker B (2018)
bioRxiv.
PUB | Download (ext.) | bioRxiv
 
2018 | Diskussionspapier | Veröffentlicht | PUB-ID: 2920633 OA
Peer-review as a teaching method
Friedrich A, Pucker B (2018) Working Paper der AG Forschendes Lernen in der dghd; 2, 2018.
Carl von Ossietzky Universität Oldenburg.
PUB | PDF | Download (ext.)
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930268
Dynamic Alignment-Free and Reference-Free Read Compression
Holley G, Wittler R, Stoye J, Hach F (2018)
JOURNAL OF COMPUTATIONAL BIOLOGY 25(7): 825-836.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930296 OA
Auxotrophy to Xeno-DNA: an exploration of combinatorial mechanisms for a high-fidelity biosafety system for synthetic biology applications
Whitford CM, Dymek S, Kerkhoff D, März C, Schmidt O, Edich M, Droste J, Pucker B, Rückert C, Kalinowski J (2018)
Journal of Biological Engineering 12: 13.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932870 OA PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | bioRxiv
 

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